RNA–Protein interactions for RNA: ENST00000590901.5

CXXC1-214, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 2,562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-214ENST00000590901 COL9A3Q14050 684 aaPredicted RBP18.5■□□□□ 0.55
CXXC1-214ENST00000590901 CCDC183Q5T5S1 534 aa18.5■□□□□ 0.55
CXXC1-214ENST00000590901 USP48Q86UV5 1035 aa18.5■□□□□ 0.55
CXXC1-214ENST00000590901 BCL2L12Q9HB09 334 aa18.5■□□□□ 0.55
CXXC1-214ENST00000590901 LOC102724428A0A0B4J2F2 783 aa18.49■□□□□ 0.55
CXXC1-214ENST00000590901 SIK1P57059 783 aa18.49■□□□□ 0.55
CXXC1-214ENST00000590901 GDPD2Q9HCC8 539 aa18.49■□□□□ 0.55
CXXC1-214ENST00000590901 AOX1Q06278 1338 aa18.49■□□□□ 0.55
CXXC1-214ENST00000590901 UBN2Q6ZU65 1347 aa18.49■□□□□ 0.55
CXXC1-214ENST00000590901 LETM1O95202 739 aaPredicted RBP18.49■□□□□ 0.55
CXXC1-214ENST00000590901 CRKLP46109 303 aaKnown RBP18.49■□□□□ 0.55
CXXC1-214ENST00000590901 GIGYF2Q6Y7W6 1299 aaKnown RBP18.49■□□□□ 0.55
CXXC1-214ENST00000590901 BARGINQ6ZT62 677 aa18.49■□□□□ 0.55
CXXC1-214ENST00000590901 FAM227BQ96M60 508 aa18.49■□□□□ 0.55
CXXC1-214ENST00000590901 HSPA1LP34931 641 aa18.48■□□□□ 0.55
CXXC1-214ENST00000590901 TNNI3KQ59H18 835 aa18.48■□□□□ 0.55
CXXC1-214ENST00000590901 FPGT-TNNI3KV9GXZ4 949 aa18.48■□□□□ 0.55
CXXC1-214ENST00000590901 WDR33Q9C0J8 1336 aaKnown RBP18.48■□□□□ 0.55
CXXC1-214ENST00000590901 GLRX3O76003 335 aaKnown RBP18.48■□□□□ 0.55
CXXC1-214ENST00000590901 FOXD4L6Q3SYB3 417 aaPredicted RBP18.48■□□□□ 0.55
CXXC1-214ENST00000590901 FOXD4L3Q6VB84 417 aaPredicted RBP18.48■□□□□ 0.55
CXXC1-214ENST00000590901 KIF6Q6ZMV9 814 aa18.48■□□□□ 0.55
CXXC1-214ENST00000590901 NLRP10Q86W26 655 aa18.48■□□□□ 0.55
CXXC1-214ENST00000590901 ERC1Q8IUD2 1116 aa18.48■□□□□ 0.55
CXXC1-214ENST00000590901 TEX13AQ9BXU3 409 aaPredicted RBP18.48■□□□□ 0.55
CXXC1-214ENST00000590901 HDAC5Q9UQL6 1122 aa18.48■□□□□ 0.55
CXXC1-214ENST00000590901 NOL8Q76FK4 1167 aaKnown RBP18.47■□□□□ 0.55
CXXC1-214ENST00000590901 DZIP3Q86Y13 1208 aaKnown RBP18.47■□□□□ 0.55
CXXC1-214ENST00000590901 PDCL2Q8N4E4 241 aa18.47■□□□□ 0.55
CXXC1-214ENST00000590901 TTC41PQ6P2S7 1318 aa18.47■□□□□ 0.55
CXXC1-214ENST00000590901 ANAPC15P60006 121 aa18.47■□□□□ 0.55
CXXC1-214ENST00000590901 PTH1RQ03431 593 aa18.47■□□□□ 0.55
CXXC1-214ENST00000590901 TMEM87AQ8NBN3 555 aa18.47■□□□□ 0.55
CXXC1-214ENST00000590901 SGSM2O43147 1006 aa18.46■□□□□ 0.55
CXXC1-214ENST00000590901 DTNBO60941 627 aa18.46■□□□□ 0.55
CXXC1-214ENST00000590901 DIAPH3Q9NSV4 1193 aa18.46■□□□□ 0.55
CXXC1-214ENST00000590901 USP21Q9UK80 565 aa18.46■□□□□ 0.55
CXXC1-214ENST00000590901 JCADQ9P266 1359 aa18.46■□□□□ 0.55
CXXC1-214ENST00000590901 RASEFQ8IZ41 740 aa18.46■□□□□ 0.55
CXXC1-214ENST00000590901 CDCA7Q9BWT1 371 aaPredicted RBP18.46■□□□□ 0.55
CXXC1-214ENST00000590901 UPF3BQ9BZI7 483 aaKnown RBP18.46■□□□□ 0.55
CXXC1-214ENST00000590901 NWD2Q9ULI1 1742 aa18.46■□□□□ 0.55
CXXC1-214ENST00000590901 NUP98P52948 1817 aa18.46■□□□□ 0.54
CXXC1-214ENST00000590901 HCLS1P14317 486 aaPredicted RBP18.45■□□□□ 0.54
CXXC1-214ENST00000590901 EIF5P55010 431 aaKnown RBP18.45■□□□□ 0.54
CXXC1-214ENST00000590901 CNTROBQ8N137 903 aa18.45■□□□□ 0.54
CXXC1-214ENST00000590901 FNBP4Q8N3X1 1017 aaPredicted RBP18.45■□□□□ 0.54
CXXC1-214ENST00000590901 PALLDQ8WX93 1383 aa18.45■□□□□ 0.54
CXXC1-214ENST00000590901 KDM4AO75164 1064 aa18.45■□□□□ 0.54
CXXC1-214ENST00000590901 CHAF1AQ13111 956 aaPredicted RBP18.45■□□□□ 0.54
CXXC1-214ENST00000590901 VPS72Q15906 364 aa18.45■□□□□ 0.54
CXXC1-214ENST00000590901 COL15A1P39059 1388 aa18.45■□□□□ 0.54
CXXC1-214ENST00000590901 AMIGO3Q86WK7 504 aa18.44■□□□□ 0.54
CXXC1-214ENST00000590901 LARP6Q9BRS8 491 aaKnown RBP18.44■□□□□ 0.54
CXXC1-214ENST00000590901 CPA1P15085 419 aa18.44■□□□□ 0.54
CXXC1-214ENST00000590901 NEUROD6Q96NK8 337 aa18.44■□□□□ 0.54
CXXC1-214ENST00000590901 LSG1Q9H089 658 aaKnown RBP18.44■□□□□ 0.54
CXXC1-214ENST00000590901 GREM2Q9H772 168 aa18.44■□□□□ 0.54
CXXC1-214ENST00000590901 TRIM28Q13263 835 aaKnown RBP18.43■□□□□ 0.54
CXXC1-214ENST00000590901 CERKQ8TCT0 537 aa18.43■□□□□ 0.54
CXXC1-214ENST00000590901 A0A0D9SFI3 127 aa18.43■□□□□ 0.54
CXXC1-214ENST00000590901 PCCAP05165 728 aaPredicted RBP18.43■□□□□ 0.54
CXXC1-214ENST00000590901 ZBTB38Q8NAP3 1195 aaPredicted RBP18.43■□□□□ 0.54
CXXC1-214ENST00000590901 LINC00116Q8NCU8 138 aa18.43■□□□□ 0.54
CXXC1-214ENST00000590901 KIAA1524Q8TCG1 905 aa18.43■□□□□ 0.54
CXXC1-214ENST00000590901 ANKRD7Q92527 254 aa18.43■□□□□ 0.54
CXXC1-214ENST00000590901 TAF6LQ9Y6J9 622 aa18.43■□□□□ 0.54
CXXC1-214ENST00000590901 RPAP1Q9BWH6 1393 aaPredicted RBP18.43■□□□□ 0.54
CXXC1-214ENST00000590901 TPM3P06753 285 aa18.42■□□□□ 0.54
CXXC1-214ENST00000590901 IL6STP40189 918 aaPredicted RBP18.42■□□□□ 0.54
CXXC1-214ENST00000590901 CCDC87Q9NVE4 849 aa18.42■□□□□ 0.54
CXXC1-214ENST00000590901 SPDYE4A6NLX3 237 aa18.42■□□□□ 0.54
CXXC1-214ENST00000590901 RIOK3O14730 519 aaKnown RBP18.42■□□□□ 0.54
CXXC1-214ENST00000590901 NMIQ13287 307 aaPredicted RBP18.42■□□□□ 0.54
CXXC1-214ENST00000590901 SUSD4Q5VX71 490 aa18.42■□□□□ 0.54
CXXC1-214ENST00000590901 SEC62Q99442 399 aaKnown RBP18.42■□□□□ 0.54
CXXC1-214ENST00000590901 TRMT112Q9UI30 125 aaKnown RBP18.42■□□□□ 0.54
CXXC1-214ENST00000590901 SNAP23O00161 211 aa18.41■□□□□ 0.54
CXXC1-214ENST00000590901 ADORA1P30542 326 aa18.41■□□□□ 0.54
CXXC1-214ENST00000590901 TTLL11Q8NHH1 800 aa18.41■□□□□ 0.54
CXXC1-214ENST00000590901 IL17RAQ96F46 866 aa18.41■□□□□ 0.54
CXXC1-214ENST00000590901 DNAJC2Q99543 621 aaKnown RBP18.41■□□□□ 0.54
CXXC1-214ENST00000590901 EYA2O00167 538 aa18.41■□□□□ 0.54
CXXC1-214ENST00000590901 DDX46Q7L014 1031 aaKnown RBP18.41■□□□□ 0.54
CXXC1-214ENST00000590901 ZNF589Q86UQ0 364 aaPredicted RBP18.41■□□□□ 0.54
CXXC1-214ENST00000590901 UBE2HP62256 183 aa18.4■□□□□ 0.54
CXXC1-214ENST00000590901 PYCARDQ9ULZ3 195 aa18.4■□□□□ 0.54
CXXC1-214ENST00000590901 CNPY2Q9Y2B0 182 aa18.4■□□□□ 0.54
CXXC1-214ENST00000590901 IRS4O14654 1257 aaPredicted RBP18.39■□□□□ 0.54
CXXC1-214ENST00000590901 CSF1RP07333 972 aa18.39■□□□□ 0.54
CXXC1-214ENST00000590901 ZNF34Q8IZ26 560 aa18.39■□□□□ 0.54
CXXC1-214ENST00000590901 KLHL34Q8N239 644 aa18.39■□□□□ 0.54
CXXC1-214ENST00000590901 CTIFO43310 598 aaKnown RBP18.39■□□□□ 0.53
CXXC1-214ENST00000590901 CAMTA2O94983 1202 aa18.39■□□□□ 0.53
CXXC1-214ENST00000590901 CCDC129Q6ZRS4 1044 aa18.39■□□□□ 0.53
CXXC1-214ENST00000590901 EVI5LQ96CN4 794 aa18.39■□□□□ 0.53
CXXC1-214ENST00000590901 FSD1Q9BTV5 496 aa18.39■□□□□ 0.53
CXXC1-214ENST00000590901 KCNF1Q9H3M0 494 aa18.39■□□□□ 0.53
CXXC1-214ENST00000590901 U2AF2P26368 475 aaKnown RBP eCLIP18.38■□□□□ 0.536e-8■□□□□ 9.8
CXXC1-214ENST00000590901 HSPA4P34932 840 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms