RNA–Protein interactions for RNA: ENST00000590653.5

LINC01140-210, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 1 (best) BASIC

Gene LINC01140, Length 3,315 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-210ENST00000590653 RIMBP3CA6NJZ7 1639 aa12.78□□□□□ -0.36
LINC01140-210ENST00000590653 RIMBP3BA6NNM3 1639 aa12.78□□□□□ -0.36
LINC01140-210ENST00000590653 RIMBP3Q9UFD9 1639 aa12.78□□□□□ -0.36
LINC01140-210ENST00000590653 A0A0G2JLW4 131 aa12.78□□□□□ -0.36
LINC01140-210ENST00000590653 PTPDC1A2A3K4 754 aa12.78□□□□□ -0.36
LINC01140-210ENST00000590653 NYAP1Q6ZVC0 841 aa12.78□□□□□ -0.36
LINC01140-210ENST00000590653 XPO4Q9C0E2 1151 aaKnown RBP12.78□□□□□ -0.36
LINC01140-210ENST00000590653 ITSN1Q15811 1721 aa12.77□□□□□ -0.36
LINC01140-210ENST00000590653 MON2Q7Z3U7 1717 aa12.77□□□□□ -0.36
LINC01140-210ENST00000590653 LMOD1P29536 600 aaPredicted RBP12.77□□□□□ -0.36
LINC01140-210ENST00000590653 GOLGA8FQ08AF8 430 aa12.77□□□□□ -0.36
LINC01140-210ENST00000590653 GOLGA8DPQ0D2H9 430 aa12.77□□□□□ -0.36
LINC01140-210ENST00000590653 HSP90AA4PQ58FG1 418 aa12.77□□□□□ -0.36
LINC01140-210ENST00000590653 NEUROD6Q96NK8 337 aa12.77□□□□□ -0.36
LINC01140-210ENST00000590653 ZSCAN16Q9H4T2 348 aaPredicted RBP12.77□□□□□ -0.36
LINC01140-210ENST00000590653 XRN1Q8IZH2 1706 aaKnown RBP12.77□□□□□ -0.36
LINC01140-210ENST00000590653 SLC39A6Q13433 755 aa12.77□□□□□ -0.37
LINC01140-210ENST00000590653 DPCR1Q3MIW9 517 aa12.77□□□□□ -0.37
LINC01140-210ENST00000590653 ARHGAP29Q52LW3 1261 aa12.77□□□□□ -0.37
LINC01140-210ENST00000590653 SIRT1Q96EB6 747 aa12.77□□□□□ -0.37
LINC01140-210ENST00000590653 ZNF446Q9NWS9 450 aa12.77□□□□□ -0.37
LINC01140-210ENST00000590653 DNAI1Q9UI46 699 aa12.77□□□□□ -0.37
LINC01140-210ENST00000590653 NRKQ7Z2Y5 1582 aa12.77□□□□□ -0.37
LINC01140-210ENST00000590653 NEMFO60524 1076 aa12.77□□□□□ -0.37
LINC01140-210ENST00000590653 EPHA10Q5JZY3 1008 aa12.77□□□□□ -0.37
LINC01140-210ENST00000590653 EPC1Q9H2F5 836 aa12.77□□□□□ -0.37
LINC01140-210ENST00000590653 GJB4Q9NTQ9 266 aa12.77□□□□□ -0.37
LINC01140-210ENST00000590653 SFPQP23246 707 aaKnown RBP eCLIP12.76□□□□□ -0.37
LINC01140-210ENST00000590653 TFCP2Q12800 502 aa12.76□□□□□ -0.37
LINC01140-210ENST00000590653 NOL10Q9BSC4 688 aaKnown RBP12.76□□□□□ -0.37
LINC01140-210ENST00000590653 HMG20BQ9P0W2 317 aa12.76□□□□□ -0.37
LINC01140-210ENST00000590653 NPHP4O75161 1426 aaPredicted RBP12.76□□□□□ -0.37
LINC01140-210ENST00000590653 PDIA4P13667 645 aaKnown RBP12.76□□□□□ -0.37
LINC01140-210ENST00000590653 CDC25BP30305 580 aa12.76□□□□□ -0.37
LINC01140-210ENST00000590653 FAM160A1Q05DH4 1040 aa12.76□□□□□ -0.37
LINC01140-210ENST00000590653 MTX1Q13505 466 aa12.76□□□□□ -0.37
LINC01140-210ENST00000590653 KRT32Q14532 448 aa12.76□□□□□ -0.37
LINC01140-210ENST00000590653 C1orf141Q5JVX7 400 aa12.76□□□□□ -0.37
LINC01140-210ENST00000590653 E4F1Q66K89 784 aaPredicted RBP12.76□□□□□ -0.37
LINC01140-210ENST00000590653 NAT10Q9H0A0 1025 aaKnown RBP12.76□□□□□ -0.37
LINC01140-210ENST00000590653 GPHNQ9NQX3 736 aaPredicted RBP12.76□□□□□ -0.37
LINC01140-210ENST00000590653 CCDC66A2RUB6 948 aa12.75□□□□□ -0.37
LINC01140-210ENST00000590653 CTAGE5O15320 804 aa12.75□□□□□ -0.37
LINC01140-210ENST00000590653 ALDH1L1O75891 902 aa12.75□□□□□ -0.37
LINC01140-210ENST00000590653 ADD1P35611 737 aaKnown RBP12.75□□□□□ -0.37
LINC01140-210ENST00000590653 STK38Q15208 465 aa12.75□□□□□ -0.37
LINC01140-210ENST00000590653 SARM1Q6SZW1 724 aa12.75□□□□□ -0.37
LINC01140-210ENST00000590653 STOX1Q6ZVD7 989 aa12.75□□□□□ -0.37
LINC01140-210ENST00000590653 NSUN7Q8NE18 718 aaKnown RBP12.75□□□□□ -0.37
LINC01140-210ENST00000590653 MYD88Q99836 296 aa12.75□□□□□ -0.37
LINC01140-210ENST00000590653 DBNDD2Q9BQY9 259 aa12.75□□□□□ -0.37
LINC01140-210ENST00000590653 DBNLQ9UJU6 430 aaKnown RBP12.75□□□□□ -0.37
LINC01140-210ENST00000590653 URI1O94763 535 aaPredicted RBP12.75□□□□□ -0.37
LINC01140-210ENST00000590653 CAVIN2O95810 425 aa12.75□□□□□ -0.37
LINC01140-210ENST00000590653 PPP1R13BQ96KQ4 1090 aa12.75□□□□□ -0.37
LINC01140-210ENST00000590653 RCOR1Q9UKL0 485 aa12.75□□□□□ -0.37
LINC01140-210ENST00000590653 GTF2E1P29083 439 aaPredicted RBP12.75□□□□□ -0.37
LINC01140-210ENST00000590653 NDUFA8P51970 172 aa12.75□□□□□ -0.37
LINC01140-210ENST00000590653 LINS1Q8NG48 757 aa12.75□□□□□ -0.37
LINC01140-210ENST00000590653 ZNF396Q96N95 335 aaPredicted RBP12.75□□□□□ -0.37
LINC01140-210ENST00000590653 PCDHA7Q9UN72 937 aa12.75□□□□□ -0.37
LINC01140-210ENST00000590653 COL15A1P39059 1388 aa12.74□□□□□ -0.37
LINC01140-210ENST00000590653 ATP5J2-PTCD1G3V325 749 aa12.74□□□□□ -0.37
LINC01140-210ENST00000590653 PTCD1O75127 700 aaKnown RBP12.74□□□□□ -0.37
LINC01140-210ENST00000590653 GIGYF1O75420 1035 aaPredicted RBP12.74□□□□□ -0.37
LINC01140-210ENST00000590653 CLCN6P51797 869 aa12.74□□□□□ -0.37
LINC01140-210ENST00000590653 GNL2Q13823 731 aaKnown RBP12.74□□□□□ -0.37
LINC01140-210ENST00000590653 ARMCX5Q6P1M9 558 aa12.74□□□□□ -0.37
LINC01140-210ENST00000590653 NBPF11Q86T75 865 aa12.74□□□□□ -0.37
LINC01140-210ENST00000590653 GOLIM4O00461 696 aa12.74□□□□□ -0.37
LINC01140-210ENST00000590653 CTDNEP1O95476 244 aa12.74□□□□□ -0.37
LINC01140-210ENST00000590653 HAND2P61296 217 aa12.74□□□□□ -0.37
LINC01140-210ENST00000590653 TAF3Q5VWG9 929 aa12.74□□□□□ -0.37
LINC01140-210ENST00000590653 MNS1Q8NEH6 495 aa12.74□□□□□ -0.37
LINC01140-210ENST00000590653 TMEM51Q9NW97 253 aa12.74□□□□□ -0.37
LINC01140-210ENST00000590653 HDAC5Q9UQL6 1122 aa12.74□□□□□ -0.37
LINC01140-210ENST00000590653 SEC31AO94979 1220 aaKnown RBP12.73□□□□□ -0.37
LINC01140-210ENST00000590653 DDX58O95786 925 aaKnown RBP12.73□□□□□ -0.37
LINC01140-210ENST00000590653 BMS1Q14692 1282 aaKnown RBP12.73□□□□□ -0.37
LINC01140-210ENST00000590653 STK11IPQ8N1F8 1099 aa12.73□□□□□ -0.37
LINC01140-210ENST00000590653 UBXN4Q92575 508 aa12.73□□□□□ -0.37
LINC01140-210ENST00000590653 TIGD1Q96MW7 591 aa12.73□□□□□ -0.37
LINC01140-210ENST00000590653 BABAM1Q9NWV8 329 aa12.73□□□□□ -0.37
LINC01140-210ENST00000590653 ATP1A3P13637 1013 aa12.73□□□□□ -0.37
LINC01140-210ENST00000590653 NEXNQ0ZGT2 675 aa12.73□□□□□ -0.37
LINC01140-210ENST00000590653 MRPS27Q92552 414 aaKnown RBP12.73□□□□□ -0.37
LINC01140-210ENST00000590653 CLIC4Q9Y696 253 aa12.73□□□□□ -0.37
LINC01140-210ENST00000590653 U3KPZ7 1027 aaPredicted RBP12.73□□□□□ -0.37
LINC01140-210ENST00000590653 PXDNLA1KZ92 1463 aa12.73□□□□□ -0.37
LINC01140-210ENST00000590653 NRDCO43847 1150 aa12.73□□□□□ -0.37
LINC01140-210ENST00000590653 MARCKSP29966 332 aaPredicted RBP12.73□□□□□ -0.37
LINC01140-210ENST00000590653 GSDMDP57764 484 aa12.73□□□□□ -0.37
LINC01140-210ENST00000590653 MCMDC2Q4G0Z9 681 aa12.73□□□□□ -0.37
LINC01140-210ENST00000590653 TTLL5Q6EMB2 1281 aa12.73□□□□□ -0.37
LINC01140-210ENST00000590653 UBE3BQ7Z3V4 1068 aa12.73□□□□□ -0.37
LINC01140-210ENST00000590653 ZCCHC17Q9NP64 241 aaKnown RBP12.73□□□□□ -0.37
LINC01140-210ENST00000590653 MED23Q9ULK4 1368 aa12.73□□□□□ -0.37
LINC01140-210ENST00000590653 IGKV5-2P06315 115 aa12.72□□□□□ -0.37
LINC01140-210ENST00000590653 IRX5P78411 483 aaPredicted RBP12.72□□□□□ -0.37
LINC01140-210ENST00000590653 EID1Q9Y6B2 187 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms