RNA–Protein interactions for RNA: ENST00000590619.1

DNMT1-222, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-222ENST00000590619 LDLRAD1Q5T700 205 aa8.7□□□□□ -1.02
DNMT1-222ENST00000590619 GIGYF2Q6Y7W6 1299 aaKnown RBP8.7□□□□□ -1.02
DNMT1-222ENST00000590619 DDX46Q7L014 1031 aaKnown RBP8.7□□□□□ -1.02
DNMT1-222ENST00000590619 NBPF11Q86T75 865 aa8.7□□□□□ -1.02
DNMT1-222ENST00000590619 GRAPLQ8TC17 118 aaPredicted RBP8.7□□□□□ -1.02
DNMT1-222ENST00000590619 PHACTR3Q96KR7 559 aa8.7□□□□□ -1.02
DNMT1-222ENST00000590619 UTP14AQ9BVJ6 771 aaKnown RBP8.7□□□□□ -1.02
DNMT1-222ENST00000590619 RRP7AQ9Y3A4 280 aaKnown RBP8.7□□□□□ -1.02
DNMT1-222ENST00000590619 IBTKQ9P2D0 1353 aaPredicted RBP8.7□□□□□ -1.02
DNMT1-222ENST00000590619 MANSC4A6NHS7 340 aaPredicted RBP8.69□□□□□ -1.02
DNMT1-222ENST00000590619 C6orf229H3BNL8 230 aa8.69□□□□□ -1.02
DNMT1-222ENST00000590619 SP3Q02447 781 aa8.69□□□□□ -1.02
DNMT1-222ENST00000590619 TCIRG1Q13488 830 aa8.69□□□□□ -1.02
DNMT1-222ENST00000590619 PRKG1Q13976 671 aa8.69□□□□□ -1.02
DNMT1-222ENST00000590619 KIF6Q6ZMV9 814 aa8.69□□□□□ -1.02
DNMT1-222ENST00000590619 GMLQ99445 158 aa8.69□□□□□ -1.02
DNMT1-222ENST00000590619 MYOZ2Q9NPC6 264 aa8.69□□□□□ -1.02
DNMT1-222ENST00000590619 MYL6BP14649 208 aa8.68□□□□□ -1.02
DNMT1-222ENST00000590619 GPSM2P81274 684 aa8.68□□□□□ -1.02
DNMT1-222ENST00000590619 CRHR2Q13324 411 aa8.68□□□□□ -1.02
DNMT1-222ENST00000590619 NBPF9Q3BBW0 867 aa8.68□□□□□ -1.02
DNMT1-222ENST00000590619 SLC9C1Q4G0N8 1177 aa8.68□□□□□ -1.02
DNMT1-222ENST00000590619 PARP10Q53GL7 1025 aa8.68□□□□□ -1.02
DNMT1-222ENST00000590619 RSBN1LQ6PCB5 846 aaPredicted RBP8.68□□□□□ -1.02
DNMT1-222ENST00000590619 ARMC9Q7Z3E5 817 aa8.68□□□□□ -1.02
DNMT1-222ENST00000590619 AGBL3Q8NEM8 1001 aa8.68□□□□□ -1.02
DNMT1-222ENST00000590619 NECTIN2Q92692 538 aa8.68□□□□□ -1.02
DNMT1-222ENST00000590619 SLC10A4Q96EP9 437 aa8.68□□□□□ -1.02
DNMT1-222ENST00000590619 PRDM6Q9NQX0 595 aa8.68□□□□□ -1.02
DNMT1-222ENST00000590619 MIS18AQ9NYP9 233 aa8.68□□□□□ -1.02
DNMT1-222ENST00000590619 STXBP5LQ9Y2K9 1186 aa8.68□□□□□ -1.02
DNMT1-222ENST00000590619 PTCH2Q9Y6C5 1203 aa8.68□□□□□ -1.02
DNMT1-222ENST00000590619 A0A1W2PPC1 479 aa8.67□□□□□ -1.02
DNMT1-222ENST00000590619 ZBTB7BO15156 539 aaPredicted RBP8.67□□□□□ -1.02
DNMT1-222ENST00000590619 USP17L8P0C7I0 530 aa8.67□□□□□ -1.02
DNMT1-222ENST00000590619 Q7L0L9 218 aa8.67□□□□□ -1.02
DNMT1-222ENST00000590619 MCM10Q7L590 875 aa8.67□□□□□ -1.02
DNMT1-222ENST00000590619 TMC4Q7Z404 712 aa8.67□□□□□ -1.02
DNMT1-222ENST00000590619 DEFB123Q8N688 67 aa8.67□□□□□ -1.02
DNMT1-222ENST00000590619 TBC1D16Q8TBP0 767 aa8.67□□□□□ -1.02
DNMT1-222ENST00000590619 PTPN18Q99952 460 aa8.67□□□□□ -1.02
DNMT1-222ENST00000590619 STAP2Q9UGK3 403 aa8.67□□□□□ -1.02
DNMT1-222ENST00000590619 FZD1Q9UP38 647 aa8.67□□□□□ -1.02
DNMT1-222ENST00000590619 LAMA3Q16787 3333 aa8.66□□□□□ -1.02
DNMT1-222ENST00000590619 NF2P35240 595 aa8.66□□□□□ -1.02
DNMT1-222ENST00000590619 DCTN1Q14203 1278 aa8.66□□□□□ -1.02
DNMT1-222ENST00000590619 GPR153Q6NV75 609 aa8.66□□□□□ -1.02
DNMT1-222ENST00000590619 ANKRD13DQ6ZTN6 518 aa8.66□□□□□ -1.02
DNMT1-222ENST00000590619 UBE2Q1Q7Z7E8 422 aa8.66□□□□□ -1.02
DNMT1-222ENST00000590619 SH3TC2Q8TF17 1288 aa8.66□□□□□ -1.02
DNMT1-222ENST00000590619 CELF1Q92879 486 aaKnown RBP8.66□□□□□ -1.02
DNMT1-222ENST00000590619 SHISA4Q96DD7 197 aa8.66□□□□□ -1.02
DNMT1-222ENST00000590619 EYA3Q99504 573 aa8.66□□□□□ -1.02
DNMT1-222ENST00000590619 ZC3H12CQ9C0D7 883 aaKnown RBP8.66□□□□□ -1.02
DNMT1-222ENST00000590619 MTMR10Q9NXD2 777 aa8.66□□□□□ -1.02
DNMT1-222ENST00000590619 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.66□□□□□ -1.02
DNMT1-222ENST00000590619 ANGEL1Q9UNK9 670 aaKnown RBP8.66□□□□□ -1.02
DNMT1-222ENST00000590619 NR2E3Q9Y5X4 410 aa8.66□□□□□ -1.02
DNMT1-222ENST00000590619 RBBP6Q7Z6E9 1792 aaKnown RBP8.66□□□□□ -1.02
DNMT1-222ENST00000590619 U2SURPO15042 1029 aaKnown RBP8.65□□□□□ -1.02
DNMT1-222ENST00000590619 TAF7Q15545 349 aaPredicted RBP8.65□□□□□ -1.02
DNMT1-222ENST00000590619 AMER1Q5JTC6 1135 aaPredicted RBP8.65□□□□□ -1.02
DNMT1-222ENST00000590619 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.65□□□□□ -1.02
DNMT1-222ENST00000590619 KNSTRNQ9Y448 316 aa8.65□□□□□ -1.02
DNMT1-222ENST00000590619 ZNF609O15014 1411 aa8.64□□□□□ -1.03
DNMT1-222ENST00000590619 TESPA1A2RU30 521 aaPredicted RBP8.64□□□□□ -1.03
DNMT1-222ENST00000590619 WNT10BO00744 389 aa8.64□□□□□ -1.03
DNMT1-222ENST00000590619 ZBTB48P10074 688 aaPredicted RBP8.64□□□□□ -1.03
DNMT1-222ENST00000590619 MTFR1Q15390 333 aa8.64□□□□□ -1.03
DNMT1-222ENST00000590619 OTUD7BQ6GQQ9 843 aa8.64□□□□□ -1.03
DNMT1-222ENST00000590619 NLRP10Q86W26 655 aa8.64□□□□□ -1.03
DNMT1-222ENST00000590619 WNK4Q96J92 1243 aa8.64□□□□□ -1.03
DNMT1-222ENST00000590619 CLMNQ96JQ2 1002 aa8.64□□□□□ -1.03
DNMT1-222ENST00000590619 HTATIP2Q9BUP3 242 aa8.64□□□□□ -1.03
DNMT1-222ENST00000590619 UNC80Q8N2C7 3258 aa8.64□□□□□ -1.03
DNMT1-222ENST00000590619 DUOX1Q9NRD9 1551 aa8.64□□□□□ -1.03
DNMT1-222ENST00000590619 SIPA1L3O60292 1781 aaPredicted RBP8.63□□□□□ -1.03
DNMT1-222ENST00000590619 ERBB4Q15303 1308 aa8.63□□□□□ -1.03
DNMT1-222ENST00000590619 G3V3G9 751 aa8.63□□□□□ -1.03
DNMT1-222ENST00000590619 GJA5P36382 358 aa8.63□□□□□ -1.03
DNMT1-222ENST00000590619 ARHGEF6Q15052 776 aa8.63□□□□□ -1.03
DNMT1-222ENST00000590619 MAP3K11Q16584 847 aa8.63□□□□□ -1.03
DNMT1-222ENST00000590619 DCAF8Q5TAQ9 597 aa8.63□□□□□ -1.03
DNMT1-222ENST00000590619 LRP10Q7Z4F1 713 aa8.63□□□□□ -1.03
DNMT1-222ENST00000590619 RTF1Q92541 710 aaKnown RBP8.63□□□□□ -1.03
DNMT1-222ENST00000590619 ZNF428Q96B54 188 aa8.63□□□□□ -1.03
DNMT1-222ENST00000590619 THUMPD2Q9BTF0 503 aaKnown RBP8.63□□□□□ -1.03
DNMT1-222ENST00000590619 TRMT112Q9UI30 125 aaKnown RBP8.63□□□□□ -1.03
DNMT1-222ENST00000590619 NUP98P52948 1817 aa8.63□□□□□ -1.03
DNMT1-222ENST00000590619 USP17L3A6NCW0 530 aa8.62□□□□□ -1.03
DNMT1-222ENST00000590619 USP17L4A6NCW7 530 aa8.62□□□□□ -1.03
DNMT1-222ENST00000590619 COL9A1P20849 921 aa8.62□□□□□ -1.03
DNMT1-222ENST00000590619 PRKAR2BP31323 418 aa8.62□□□□□ -1.03
DNMT1-222ENST00000590619 GJA8P48165 433 aa8.62□□□□□ -1.03
DNMT1-222ENST00000590619 RPS8P62241 208 aaKnown RBP8.62□□□□□ -1.03
DNMT1-222ENST00000590619 PDIA6Q15084 440 aa8.62□□□□□ -1.03
DNMT1-222ENST00000590619 SF3B3Q15393 1217 aaKnown RBP8.62□□□□□ -1.03
DNMT1-222ENST00000590619 USP17L1Q7RTZ2 530 aa8.62□□□□□ -1.03
DNMT1-222ENST00000590619 MXD3Q9BW11 206 aa8.62□□□□□ -1.03
DNMT1-222ENST00000590619 PODXL2Q9NZ53 605 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms