RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 ECE2O60344 883 aa18.37■□□□□ 0.53
MBD1-220ENST00000589758 RPS12P25398 132 aaKnown RBP18.37■□□□□ 0.53
MBD1-220ENST00000589758 CACNA1FO60840 1977 aa18.37■□□□□ 0.53
MBD1-220ENST00000589758 G3V3G9 751 aa18.36■□□□□ 0.53
MBD1-220ENST00000589758 VAMP4O75379 141 aa18.36■□□□□ 0.53
MBD1-220ENST00000589758 UFL1O94874 794 aa18.36■□□□□ 0.53
MBD1-220ENST00000589758 FLIIQ13045 1269 aa18.36■□□□□ 0.53
MBD1-220ENST00000589758 DOK7Q18PE1 504 aa18.36■□□□□ 0.53
MBD1-220ENST00000589758 CWF19L2Q2TBE0 894 aaKnown RBP18.36■□□□□ 0.53
MBD1-220ENST00000589758 DCAF8Q5TAQ9 597 aa18.36■□□□□ 0.53
MBD1-220ENST00000589758 MICALL2Q8IY33 904 aa18.36■□□□□ 0.53
MBD1-220ENST00000589758 CCDC85AQ96PX6 553 aaPredicted RBP18.36■□□□□ 0.53
MBD1-220ENST00000589758 TRPM7Q96QT4 1865 aa18.35■□□□□ 0.53
MBD1-220ENST00000589758 XDHP47989 1333 aa18.35■□□□□ 0.53
MBD1-220ENST00000589758 FKBP5Q13451 457 aaPredicted RBP18.35■□□□□ 0.53
MBD1-220ENST00000589758 TTLL11Q8NHH1 800 aa18.35■□□□□ 0.53
MBD1-220ENST00000589758 MYH16Q9H6N6 1097 aa18.35■□□□□ 0.53
MBD1-220ENST00000589758 ZBTB12Q9Y330 459 aaPredicted RBP18.35■□□□□ 0.53
MBD1-220ENST00000589758 RTL9Q8NET4 1388 aa18.34■□□□□ 0.53
MBD1-220ENST00000589758 WDR33Q9C0J8 1336 aaKnown RBP18.34■□□□□ 0.53
MBD1-220ENST00000589758 MYH3P11055 1940 aa18.34■□□□□ 0.53
MBD1-220ENST00000589758 H7C1W4 665 aa18.34■□□□□ 0.53
MBD1-220ENST00000589758 TRAF5O00463 557 aa18.34■□□□□ 0.53
MBD1-220ENST00000589758 ATP2B4P23634 1241 aa18.34■□□□□ 0.53
MBD1-220ENST00000589758 HIRAP54198 1017 aaPredicted RBP18.34■□□□□ 0.53
MBD1-220ENST00000589758 EXOSC9Q06265 439 aaKnown RBP18.34■□□□□ 0.53
MBD1-220ENST00000589758 CST9Q5W186 159 aa18.34■□□□□ 0.53
MBD1-220ENST00000589758 CDC37L1Q7L3B6 337 aa18.34■□□□□ 0.53
MBD1-220ENST00000589758 FAM9BQ8IZU0 186 aa18.34■□□□□ 0.53
MBD1-220ENST00000589758 TRPM4Q8TD43 1214 aa18.34■□□□□ 0.53
MBD1-220ENST00000589758 DNAAF4Q8WXU2 420 aa18.34■□□□□ 0.53
MBD1-220ENST00000589758 AIDAQ96BJ3 306 aa18.34■□□□□ 0.53
MBD1-220ENST00000589758 GPR101Q96P66 508 aaPredicted RBP18.34■□□□□ 0.53
MBD1-220ENST00000589758 ECE1P42892 770 aa18.33■□□□□ 0.52
MBD1-220ENST00000589758 FMR1Q06787 632 aaKnown RBP eCLIP18.33■□□□□ 0.52
MBD1-220ENST00000589758 GCKRQ14397 625 aa18.33■□□□□ 0.52
MBD1-220ENST00000589758 LINS1Q8NG48 757 aa18.33■□□□□ 0.52
MBD1-220ENST00000589758 BSDC1Q9NW68 430 aaPredicted RBP18.33■□□□□ 0.52
MBD1-220ENST00000589758 VIL1P09327 827 aaKnown RBP18.32■□□□□ 0.52
MBD1-220ENST00000589758 DIEXFQ68CQ4 756 aaKnown RBP18.32■□□□□ 0.52
MBD1-220ENST00000589758 UBE3BQ7Z3V4 1068 aa18.32■□□□□ 0.52
MBD1-220ENST00000589758 TNS4Q8IZW8 715 aa18.32■□□□□ 0.52
MBD1-220ENST00000589758 PLA2G12BQ9BX93 195 aa18.32■□□□□ 0.52
MBD1-220ENST00000589758 GLIS2Q9BZE0 524 aaPredicted RBP18.32■□□□□ 0.52
MBD1-220ENST00000589758 GREM2Q9H772 168 aa18.32■□□□□ 0.52
MBD1-220ENST00000589758 KCNQ5Q9NR82 932 aa18.32■□□□□ 0.52
MBD1-220ENST00000589758 TLL2Q9Y6L7 1015 aa18.32■□□□□ 0.52
MBD1-220ENST00000589758 SHTN1A0MZ66 631 aa18.31■□□□□ 0.52
MBD1-220ENST00000589758 CELF2O95319 508 aaKnown RBP18.31■□□□□ 0.52
MBD1-220ENST00000589758 MAP2K1Q02750 393 aaPredicted RBP18.31■□□□□ 0.52
MBD1-220ENST00000589758 SAMD7Q7Z3H4 446 aa18.31■□□□□ 0.52
MBD1-220ENST00000589758 WBP1LQ9NX94 342 aa18.31■□□□□ 0.52
MBD1-220ENST00000589758 FOXN1O15353 648 aa18.3■□□□□ 0.52
MBD1-220ENST00000589758 CTCFP49711 727 aaPredicted RBP18.3■□□□□ 0.52
MBD1-220ENST00000589758 PAXIP1Q6ZW49 1069 aaPredicted RBP18.3■□□□□ 0.52
MBD1-220ENST00000589758 PODNQ7Z5L7 613 aa18.3■□□□□ 0.52
MBD1-220ENST00000589758 CAPNS2Q96L46 248 aa18.3■□□□□ 0.52
MBD1-220ENST00000589758 MINPP1Q9UNW1 487 aa18.3■□□□□ 0.52
MBD1-220ENST00000589758 IGHMBP2P38935 993 aaKnown RBP18.29■□□□□ 0.52
MBD1-220ENST00000589758 TBC1D10BQ4KMP7 808 aaPredicted RBP18.29■□□□□ 0.52
MBD1-220ENST00000589758 AGBL3Q8NEM8 1001 aa18.29■□□□□ 0.52
MBD1-220ENST00000589758 HHIPL1Q96JK4 782 aa18.29■□□□□ 0.52
MBD1-220ENST00000589758 PRDM10Q9NQV6 1147 aa18.29■□□□□ 0.52
MBD1-220ENST00000589758 PCNTO95613 3336 aa18.28■□□□□ 0.52
MBD1-220ENST00000589758 CSF1RP07333 972 aa18.28■□□□□ 0.52
MBD1-220ENST00000589758 CASP7P55210 303 aa18.28■□□□□ 0.52
MBD1-220ENST00000589758 RSBN1LQ6PCB5 846 aaPredicted RBP18.28■□□□□ 0.52
MBD1-220ENST00000589758 SAPCD2Q86UD0 394 aa18.28■□□□□ 0.52
MBD1-220ENST00000589758 USP48Q86UV5 1035 aa18.28■□□□□ 0.52
MBD1-220ENST00000589758 DCPSQ96C86 337 aaKnown RBP18.28■□□□□ 0.52
MBD1-220ENST00000589758 SPINK5Q9NQ38 1064 aaPredicted RBP18.28■□□□□ 0.52
MBD1-220ENST00000589758 ZNF609O15014 1411 aa18.28■□□□□ 0.52
MBD1-220ENST00000589758 MED23Q9ULK4 1368 aa18.28■□□□□ 0.52
MBD1-220ENST00000589758 SCN9AQ15858 1988 aa18.28■□□□□ 0.52
MBD1-220ENST00000589758 ITGA6P23229 1130 aa18.27■□□□□ 0.52
MBD1-220ENST00000589758 CCT4P50991 539 aaKnown RBP18.27■□□□□ 0.52
MBD1-220ENST00000589758 RBM26Q5T8P6 1007 aaKnown RBP18.27■□□□□ 0.52
MBD1-220ENST00000589758 CYP4F22Q6NT55 531 aa18.27■□□□□ 0.52
MBD1-220ENST00000589758 MPHOSPH8Q99549 860 aa18.27■□□□□ 0.52
MBD1-220ENST00000589758 ZNF408Q9H9D4 720 aa18.27■□□□□ 0.52
MBD1-220ENST00000589758 LEMD3Q9Y2U8 911 aa18.27■□□□□ 0.52
MBD1-220ENST00000589758 PSME4Q14997 1843 aa18.26■□□□□ 0.51
MBD1-220ENST00000589758 SPEF2Q9C093 1822 aa18.26■□□□□ 0.51
MBD1-220ENST00000589758 USP17L3A6NCW0 530 aa18.26■□□□□ 0.51
MBD1-220ENST00000589758 USP17L4A6NCW7 530 aa18.26■□□□□ 0.51
MBD1-220ENST00000589758 KIF4BQ2VIQ3 1234 aa18.26■□□□□ 0.51
MBD1-220ENST00000589758 USP17L1Q7RTZ2 530 aa18.26■□□□□ 0.51
MBD1-220ENST00000589758 ANKRD2Q9GZV1 360 aa18.26■□□□□ 0.51
MBD1-220ENST00000589758 THSD7BQ9C0I4 1608 aa18.25■□□□□ 0.51
MBD1-220ENST00000589758 EGFRP00533 1210 aa18.25■□□□□ 0.51
MBD1-220ENST00000589758 MAP2K2P36507 400 aa18.25■□□□□ 0.51
MBD1-220ENST00000589758 ZNF280AP59817 542 aaPredicted RBP18.25■□□□□ 0.51
MBD1-220ENST00000589758 GRM1Q13255 1194 aa18.25■□□□□ 0.51
MBD1-220ENST00000589758 KRT26Q7Z3Y9 468 aa18.25■□□□□ 0.51
MBD1-220ENST00000589758 BEGAINQ9BUH8 593 aa18.25■□□□□ 0.51
MBD1-220ENST00000589758 ANKRD18BA2A2Z9 1011 aa18.24■□□□□ 0.51
MBD1-220ENST00000589758 F6X3S4 739 aa18.24■□□□□ 0.51
MBD1-220ENST00000589758 FAM161AQ3B820 660 aa18.24■□□□□ 0.51
MBD1-220ENST00000589758 BEND3Q5T5X7 828 aa18.24■□□□□ 0.51
MBD1-220ENST00000589758 COA1Q9GZY4 146 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms