RNA–Protein interactions for RNA: ENST00000589286.1

HMGN1P30-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 30, humanhuman

BASIC

Gene HMGN1P30, Length 268 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P30-201ENST00000589286 HFE2Q6ZVN8 426 aa6.48□□□□□ -1.37
HMGN1P30-201ENST00000589286 SNX29Q8TEQ0 813 aa6.48□□□□□ -1.37
HMGN1P30-201ENST00000589286 JPH1Q9HDC5 661 aaPredicted RBP6.48□□□□□ -1.37
HMGN1P30-201ENST00000589286 DCTN4Q9UJW0 460 aa6.48□□□□□ -1.37
HMGN1P30-201ENST00000589286 CNTNAP5Q8WYK1 1306 aa6.48□□□□□ -1.37
HMGN1P30-201ENST00000589286 ZBTB42B2RXF5 422 aa6.47□□□□□ -1.37
HMGN1P30-201ENST00000589286 PHACTR2O75167 634 aa6.47□□□□□ -1.37
HMGN1P30-201ENST00000589286 ALBP02768 609 aa6.47□□□□□ -1.37
HMGN1P30-201ENST00000589286 SNRPNP63162 240 aaKnown RBP6.47□□□□□ -1.37
HMGN1P30-201ENST00000589286 NCAPG2Q86XI2 1143 aa6.47□□□□□ -1.37
HMGN1P30-201ENST00000589286 NUDT8Q8WV74 236 aa6.47□□□□□ -1.37
HMGN1P30-201ENST00000589286 NOP53Q9NZM5 478 aaKnown RBP6.47□□□□□ -1.37
HMGN1P30-201ENST00000589286 FRRS1LQ9P0K9 344 aa6.47□□□□□ -1.37
HMGN1P30-201ENST00000589286 NAGPAQ9UK23 515 aa6.47□□□□□ -1.37
HMGN1P30-201ENST00000589286 STARD13Q9Y3M8 1113 aa6.47□□□□□ -1.37
HMGN1P30-201ENST00000589286 SPDYE3A6NKU9 549 aa6.46□□□□□ -1.38
HMGN1P30-201ENST00000589286 J3QW42 95 aa6.46□□□□□ -1.38
HMGN1P30-201ENST00000589286 TNFRSF21O75509 655 aa6.46□□□□□ -1.38
HMGN1P30-201ENST00000589286 MAPK1P28482 360 aa6.46□□□□□ -1.38
HMGN1P30-201ENST00000589286 PERM1Q5SV97 790 aa6.46□□□□□ -1.38
HMGN1P30-201ENST00000589286 DMRTB1Q96MA1 342 aa6.46□□□□□ -1.38
HMGN1P30-201ENST00000589286 RBCK1Q9BYM8 510 aa6.46□□□□□ -1.38
HMGN1P30-201ENST00000589286 PRDM6Q9NQX0 595 aa6.46□□□□□ -1.38
HMGN1P30-201ENST00000589286 CNTN3Q9P232 1028 aa6.46□□□□□ -1.38
HMGN1P30-201ENST00000589286 IRS1P35568 1242 aa6.45□□□□□ -1.38
HMGN1P30-201ENST00000589286 C20orf204Q6ZNR8 217 aa6.45□□□□□ -1.38
HMGN1P30-201ENST00000589286 ZSCAN29Q8IWY8 852 aaPredicted RBP6.45□□□□□ -1.38
HMGN1P30-201ENST00000589286 C1orf127Q8N9H9 656 aa6.45□□□□□ -1.38
HMGN1P30-201ENST00000589286 PLD4Q96BZ4 506 aa6.45□□□□□ -1.38
HMGN1P30-201ENST00000589286 SMG9Q9H0W8 520 aaKnown RBP6.45□□□□□ -1.38
HMGN1P30-201ENST00000589286 FAM177BA6PVY3 158 aa6.44□□□□□ -1.38
HMGN1P30-201ENST00000589286 KIF4AO95239 1232 aa6.44□□□□□ -1.38
HMGN1P30-201ENST00000589286 CYP2E1P05181 493 aaPredicted RBP6.44□□□□□ -1.38
HMGN1P30-201ENST00000589286 HOXB4P17483 251 aaPredicted RBP6.44□□□□□ -1.38
HMGN1P30-201ENST00000589286 LINC00114Q6XXX2 140 aa6.44□□□□□ -1.38
HMGN1P30-201ENST00000589286 SND1Q7KZF4 910 aaKnown RBP eCLIP6.44□□□□□ -1.38
HMGN1P30-201ENST00000589286 TTC9Q92623 222 aa6.44□□□□□ -1.38
HMGN1P30-201ENST00000589286 FAM129BQ96TA1 746 aa6.44□□□□□ -1.38
HMGN1P30-201ENST00000589286 LPIN3Q9BQK8 851 aa6.44□□□□□ -1.38
HMGN1P30-201ENST00000589286 KANSL3Q9P2N6 904 aa6.44□□□□□ -1.38
HMGN1P30-201ENST00000589286 FOXD3Q9UJU5 478 aaPredicted RBP6.44□□□□□ -1.38
HMGN1P30-201ENST00000589286 AMOTL2Q9Y2J4 779 aa6.44□□□□□ -1.38
HMGN1P30-201ENST00000589286 ZBTB7CA1YPR0 619 aa6.43□□□□□ -1.38
HMGN1P30-201ENST00000589286 SMNDC1O75940 238 aaKnown RBP eCLIP6.43□□□□□ -1.38
HMGN1P30-201ENST00000589286 EDN3P14138 238 aa6.43□□□□□ -1.38
HMGN1P30-201ENST00000589286 AFF1P51825 1210 aaKnown RBP6.43□□□□□ -1.38
HMGN1P30-201ENST00000589286 TRAPPC3LQ5T215 181 aa6.43□□□□□ -1.38
HMGN1P30-201ENST00000589286 C8orf86Q6ZUL3 223 aa6.43□□□□□ -1.38
HMGN1P30-201ENST00000589286 ALYREFQ86V81 257 aaKnown RBP6.43□□□□□ -1.38
HMGN1P30-201ENST00000589286 CHRDQ9H2X0 955 aa6.43□□□□□ -1.38
HMGN1P30-201ENST00000589286 EREGO14944 169 aa6.42□□□□□ -1.38
HMGN1P30-201ENST00000589286 KCNMA1Q12791 1236 aa6.42□□□□□ -1.38
HMGN1P30-201ENST00000589286 PRRT3Q5FWE3 981 aa6.42□□□□□ -1.38
HMGN1P30-201ENST00000589286 COL13A1Q5TAT6 717 aaPredicted RBP6.42□□□□□ -1.38
HMGN1P30-201ENST00000589286 WFDC8Q8IUA0 241 aa6.42□□□□□ -1.38
HMGN1P30-201ENST00000589286 CACTIN-AS1Q8N1I8 211 aa6.42□□□□□ -1.38
HMGN1P30-201ENST00000589286 PLVAPQ9BX97 442 aa6.42□□□□□ -1.38
HMGN1P30-201ENST00000589286 NIF3L1Q9GZT8 377 aa6.42□□□□□ -1.38
HMGN1P30-201ENST00000589286 ZFYVE28Q9HCC9 887 aa6.42□□□□□ -1.38
HMGN1P30-201ENST00000589286 SALL4Q9UJQ4 1053 aa6.42□□□□□ -1.38
HMGN1P30-201ENST00000589286 GPR182O15218 404 aa6.41□□□□□ -1.38
HMGN1P30-201ENST00000589286 CPNE3O75131 537 aaKnown RBP6.41□□□□□ -1.38
HMGN1P30-201ENST00000589286 NID1P14543 1247 aa6.41□□□□□ -1.38
HMGN1P30-201ENST00000589286 RAC1P63000 192 aa6.41□□□□□ -1.38
HMGN1P30-201ENST00000589286 CEP135Q66GS9 1140 aa6.41□□□□□ -1.38
HMGN1P30-201ENST00000589286 GDF6Q6KF10 455 aaPredicted RBP6.41□□□□□ -1.38
HMGN1P30-201ENST00000589286 TMC7Q7Z402 723 aa6.41□□□□□ -1.38
HMGN1P30-201ENST00000589286 CEP120Q8N960 986 aa6.41□□□□□ -1.38
HMGN1P30-201ENST00000589286 ALKBH8Q96BT7 664 aaKnown RBP6.41□□□□□ -1.38
HMGN1P30-201ENST00000589286 TRIM11Q96F44 468 aa6.41□□□□□ -1.38
HMGN1P30-201ENST00000589286 PBX4Q9BYU1 374 aa6.41□□□□□ -1.38
HMGN1P30-201ENST00000589286 DNAJC25Q9H1X3 360 aa6.41□□□□□ -1.38
HMGN1P30-201ENST00000589286 PLCB3Q01970 1234 aa6.4□□□□□ -1.38
HMGN1P30-201ENST00000589286 RASSF7Q02833 373 aa6.4□□□□□ -1.38
HMGN1P30-201ENST00000589286 TRIM28Q13263 835 aaKnown RBP6.4□□□□□ -1.38
HMGN1P30-201ENST00000589286 ORC1Q13415 861 aa6.4□□□□□ -1.38
HMGN1P30-201ENST00000589286 MSL1Q68DK7 614 aa6.4□□□□□ -1.38
HMGN1P30-201ENST00000589286 ASB16Q96NS5 453 aa6.4□□□□□ -1.38
HMGN1P30-201ENST00000589286 GZF1Q9H116 711 aaPredicted RBP6.4□□□□□ -1.38
HMGN1P30-201ENST00000589286 MUC3BQ9H195 1237 aa6.4□□□□□ -1.38
HMGN1P30-201ENST00000589286 RASSF4Q9H2L5 321 aa6.4□□□□□ -1.38
HMGN1P30-201ENST00000589286 EIF1AYO14602 144 aaKnown RBP6.39□□□□□ -1.39
HMGN1P30-201ENST00000589286 PTPRAP18433 802 aa6.39□□□□□ -1.39
HMGN1P30-201ENST00000589286 ATP11AP98196 1134 aa6.39□□□□□ -1.39
HMGN1P30-201ENST00000589286 DMRTC2Q8IXT2 367 aaPredicted RBP6.39□□□□□ -1.39
HMGN1P30-201ENST00000589286 TMEM151AQ8N4L1 468 aa6.39□□□□□ -1.39
HMGN1P30-201ENST00000589286 SUV39H2Q9H5I1 410 aa6.39□□□□□ -1.39
HMGN1P30-201ENST00000589286 TRIM33Q9UPN9 1127 aa6.39□□□□□ -1.39
HMGN1P30-201ENST00000589286 TREHO43280 583 aa6.38□□□□□ -1.39
HMGN1P30-201ENST00000589286 GDF11O95390 407 aa6.38□□□□□ -1.39
HMGN1P30-201ENST00000589286 SPATA31C1P0DKV0 1188 aa6.38□□□□□ -1.39
HMGN1P30-201ENST00000589286 COL9A3Q14050 684 aaPredicted RBP6.38□□□□□ -1.39
HMGN1P30-201ENST00000589286 GALNT12Q8IXK2 581 aa6.38□□□□□ -1.39
HMGN1P30-201ENST00000589286 IL22RA1Q8N6P7 574 aa6.38□□□□□ -1.39
HMGN1P30-201ENST00000589286 CSRNP1Q96S65 589 aa6.38□□□□□ -1.39
HMGN1P30-201ENST00000589286 OSMRQ99650 979 aa6.38□□□□□ -1.39
HMGN1P30-201ENST00000589286 LACRTQ9GZZ8 138 aa6.38□□□□□ -1.39
HMGN1P30-201ENST00000589286 DZANK1Q9NVP4 752 aa6.38□□□□□ -1.39
HMGN1P30-201ENST00000589286 PDE2AO00408 941 aaPredicted RBP6.37□□□□□ -1.39
HMGN1P30-201ENST00000589286 POLR3DP05423 398 aaPredicted RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms