RNA–Protein interactions for RNA: ENST00000588993.1

ZNF260-203, Transcript of zinc finger protein 260, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF260, Length 4,174 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF260-203ENST00000588993 RAPGEF4Q8WZA2 1011 aa2.34□□□□□ -2.04
ZNF260-203ENST00000588993 TRIM47Q96LD4 638 aa2.34□□□□□ -2.04
ZNF260-203ENST00000588993 CDK19Q9BWU1 502 aa2.34□□□□□ -2.04
ZNF260-203ENST00000588993 KRTAP4-7Q9BYR0 210 aa2.34□□□□□ -2.04
ZNF260-203ENST00000588993 GPRC5DQ9NZD1 345 aa2.34□□□□□ -2.04
ZNF260-203ENST00000588993 STK26Q9P289 416 aa2.34□□□□□ -2.04
ZNF260-203ENST00000588993 NARFQ9UHQ1 456 aa2.34□□□□□ -2.04
ZNF260-203ENST00000588993 PDE4DIPQ5VU43 2346 aa2.33□□□□□ -2.04
ZNF260-203ENST00000588993 A0A1W2PP64 1363 aa2.33□□□□□ -2.04
ZNF260-203ENST00000588993 FARP2O94887 1054 aaPredicted RBP2.33□□□□□ -2.04
ZNF260-203ENST00000588993 PTCD2Q8WV60 388 aaKnown RBP2.33□□□□□ -2.04
ZNF260-203ENST00000588993 DCPSQ96C86 337 aaKnown RBP2.33□□□□□ -2.04
ZNF260-203ENST00000588993 TRIM17Q9Y577 477 aa2.33□□□□□ -2.04
ZNF260-203ENST00000588993 KLRG2A4D1S0 409 aaPredicted RBP2.33□□□□□ -2.04
ZNF260-203ENST00000588993 NBPF9Q3BBW0 867 aa2.33□□□□□ -2.04
ZNF260-203ENST00000588993 SLC9C1Q4G0N8 1177 aa2.33□□□□□ -2.04
ZNF260-203ENST00000588993 TMEM92Q6UXU6 159 aa2.33□□□□□ -2.04
ZNF260-203ENST00000588993 CRIPAKQ8N1N5 446 aa2.33□□□□□ -2.04
ZNF260-203ENST00000588993 ZGPATQ8N5A5 531 aaKnown RBP2.33□□□□□ -2.04
ZNF260-203ENST00000588993 LINC00116Q8NCU8 138 aa2.33□□□□□ -2.04
ZNF260-203ENST00000588993 ADAMTS19Q8TE59 1207 aa2.33□□□□□ -2.04
ZNF260-203ENST00000588993 ARHGEF1Q92888 912 aaKnown RBP2.33□□□□□ -2.04
ZNF260-203ENST00000588993 SHISA4Q96DD7 197 aa2.33□□□□□ -2.04
ZNF260-203ENST00000588993 GUCD1Q96NT3 240 aa2.33□□□□□ -2.04
ZNF260-203ENST00000588993 PPP2R3BQ9Y5P8 575 aa2.33□□□□□ -2.04
ZNF260-203ENST00000588993 TTC21BQ7Z4L5 1316 aa2.33□□□□□ -2.04
ZNF260-203ENST00000588993 ADGRF5Q8IZF2 1346 aa2.33□□□□□ -2.04
ZNF260-203ENST00000588993 ADGRA2Q96PE1 1338 aa2.33□□□□□ -2.04
ZNF260-203ENST00000588993 NIM1KQ8IY84 436 aa2.33□□□□□ -2.04
ZNF260-203ENST00000588993 TRMT44Q8IYL2 757 aaKnown RBP2.33□□□□□ -2.04
ZNF260-203ENST00000588993 TMEFF1Q8IYR6 380 aa2.33□□□□□ -2.04
ZNF260-203ENST00000588993 SEMA4AQ9H3S1 761 aa2.33□□□□□ -2.04
ZNF260-203ENST00000588993 TMOD3Q9NYL9 352 aa2.33□□□□□ -2.04
ZNF260-203ENST00000588993 NUTM2FA1L443 756 aa2.32□□□□□ -2.04
ZNF260-203ENST00000588993 FOSL2P15408 326 aa2.32□□□□□ -2.04
ZNF260-203ENST00000588993 NHLH1Q02575 133 aa2.32□□□□□ -2.04
ZNF260-203ENST00000588993 ARMC9Q7Z3E5 817 aa2.32□□□□□ -2.04
ZNF260-203ENST00000588993 NECAB2Q7Z6G3 386 aa2.32□□□□□ -2.04
ZNF260-203ENST00000588993 TEX13AQ9BXU3 409 aaPredicted RBP2.32□□□□□ -2.04
ZNF260-203ENST00000588993 PLA2G2EQ9NZK7 142 aa2.32□□□□□ -2.04
ZNF260-203ENST00000588993 FBXO3Q9UK99 471 aa2.32□□□□□ -2.04
ZNF260-203ENST00000588993 JAG2Q9Y219 1238 aa2.32□□□□□ -2.04
ZNF260-203ENST00000588993 SMIM22K7EJ46 135 aa2.32□□□□□ -2.04
ZNF260-203ENST00000588993 SERPINB2P05120 415 aa2.32□□□□□ -2.04
ZNF260-203ENST00000588993 EN2P19622 333 aaPredicted RBP2.32□□□□□ -2.04
ZNF260-203ENST00000588993 ATP6V1AP38606 617 aa2.32□□□□□ -2.04
ZNF260-203ENST00000588993 BMP8AQ7Z5Y6 402 aa2.32□□□□□ -2.04
ZNF260-203ENST00000588993 VSIG10Q8N0Z9 540 aa2.32□□□□□ -2.04
ZNF260-203ENST00000588993 SYTL4Q96C24 671 aaPredicted RBP2.32□□□□□ -2.04
ZNF260-203ENST00000588993 GAS2L1Q99501 681 aaPredicted RBP2.32□□□□□ -2.04
ZNF260-203ENST00000588993 RNF123Q5XPI4 1314 aa2.32□□□□□ -2.04
ZNF260-203ENST00000588993 SP3Q02447 781 aa2.32□□□□□ -2.04
ZNF260-203ENST00000588993 GPR161Q8N6U8 529 aaKnown RBP2.32□□□□□ -2.04
ZNF260-203ENST00000588993 SEZ6LQ9BYH1 1024 aa2.32□□□□□ -2.04
ZNF260-203ENST00000588993 UBE2OQ9C0C9 1292 aaKnown RBP2.32□□□□□ -2.04
ZNF260-203ENST00000588993 TSKSQ9UJT2 592 aa2.32□□□□□ -2.04
ZNF260-203ENST00000588993 FAM50BQ9Y247 325 aa2.32□□□□□ -2.04
ZNF260-203ENST00000588993 BOLA1Q9Y3E2 137 aa2.32□□□□□ -2.04
ZNF260-203ENST00000588993 SOX1O00570 391 aaPredicted RBP2.31□□□□□ -2.04
ZNF260-203ENST00000588993 FOXD2O60548 495 aaPredicted RBP2.31□□□□□ -2.04
ZNF260-203ENST00000588993 PHF14O94880 888 aa2.31□□□□□ -2.04
ZNF260-203ENST00000588993 C7orf43Q8WVR3 580 aa2.31□□□□□ -2.04
ZNF260-203ENST00000588993 ATRNL1Q5VV63 1379 aa2.31□□□□□ -2.04
ZNF260-203ENST00000588993 DDR1Q08345 913 aa2.31□□□□□ -2.04
ZNF260-203ENST00000588993 CDX2Q99626 313 aaPredicted RBP2.31□□□□□ -2.04
ZNF260-203ENST00000588993 UPF3BQ9BZI7 483 aaKnown RBP2.31□□□□□ -2.04
ZNF260-203ENST00000588993 SEMA6BQ9H3T3 888 aa2.31□□□□□ -2.04
ZNF260-203ENST00000588993 ZFYVE28Q9HCC9 887 aa2.31□□□□□ -2.04
ZNF260-203ENST00000588993 DNAH3Q8TD57 4116 aa2.31□□□□□ -2.04
ZNF260-203ENST00000588993 SIPA1L3O60292 1781 aaPredicted RBP2.31□□□□□ -2.04
ZNF260-203ENST00000588993 SOS1Q07889 1333 aaPredicted RBP2.31□□□□□ -2.04
ZNF260-203ENST00000588993 COL11A2P13942 1736 aaPredicted RBP2.31□□□□□ -2.04
ZNF260-203ENST00000588993 LORP23490 312 aaPredicted RBP2.31□□□□□ -2.04
ZNF260-203ENST00000588993 SULF1Q8IWU6 871 aa2.31□□□□□ -2.04
ZNF260-203ENST00000588993 SYNE4Q8N205 404 aa2.31□□□□□ -2.04
ZNF260-203ENST00000588993 FBXO22Q8NEZ5 403 aa2.31□□□□□ -2.04
ZNF260-203ENST00000588993 DDX54Q8TDD1 881 aaKnown RBP2.31□□□□□ -2.04
ZNF260-203ENST00000588993 PXYLP1Q8TE99 480 aa2.31□□□□□ -2.04
ZNF260-203ENST00000588993 HERVK_113Q902F9 699 aa2.31□□□□□ -2.04
ZNF260-203ENST00000588993 ZKSCAN4Q969J2 545 aaPredicted RBP2.31□□□□□ -2.04
ZNF260-203ENST00000588993 RTFDC1Q9BY42 306 aaPredicted RBP2.31□□□□□ -2.04
ZNF260-203ENST00000588993 ANKFY1Q9P2R3 1169 aa2.31□□□□□ -2.04
ZNF260-203ENST00000588993 ANKRD31Q8N7Z5 1873 aa2.31□□□□□ -2.04
ZNF260-203ENST00000588993 MYBBP1AQ9BQG0 1328 aaKnown RBP2.31□□□□□ -2.04
ZNF260-203ENST00000588993 COL4A4P53420 1690 aaPredicted RBP2.31□□□□□ -2.04
ZNF260-203ENST00000588993 DCDC2CA8MYV0 355 aa2.31□□□□□ -2.04
ZNF260-203ENST00000588993 CHRNA5P30532 468 aa2.31□□□□□ -2.04
ZNF260-203ENST00000588993 SCNN1DP51172 638 aa2.31□□□□□ -2.04
ZNF260-203ENST00000588993 RIPPLY3P57055 190 aa2.31□□□□□ -2.04
ZNF260-203ENST00000588993 CSPP1Q1MSJ5 1256 aa2.31□□□□□ -2.04
ZNF260-203ENST00000588993 PLCD3Q8N3E9 789 aa2.31□□□□□ -2.04
ZNF260-203ENST00000588993 LBHD1Q9BQE6 289 aaPredicted RBP2.31□□□□□ -2.04
ZNF260-203ENST00000588993 STK17AQ9UEE5 414 aa2.31□□□□□ -2.04
ZNF260-203ENST00000588993 ZNRF3Q9ULT6 936 aa2.31□□□□□ -2.04
ZNF260-203ENST00000588993 AXIN2Q9Y2T1 843 aa2.31□□□□□ -2.04
ZNF260-203ENST00000588993 SBNO2Q9Y2G9 1366 aa2.31□□□□□ -2.04
ZNF260-203ENST00000588993 EVC2Q86UK5 1308 aa2.3□□□□□ -2.04
ZNF260-203ENST00000588993 IRF5Q13568 498 aa2.3□□□□□ -2.04
ZNF260-203ENST00000588993 ZNF467Q7Z7K2 595 aaPredicted RBP2.3□□□□□ -2.04
ZNF260-203ENST00000588993 KRTAP9-9Q9BYP9 154 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms