RNA–Protein interactions for RNA: ENST00000588937.5

MBD1-217, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-217ENST00000588937 PDIA4P13667 645 aaKnown RBP18.25■□□□□ 0.51
MBD1-217ENST00000588937 CCDC158Q5M9N0 1113 aa18.25■□□□□ 0.51
MBD1-217ENST00000588937 DDX46Q7L014 1031 aaKnown RBP18.25■□□□□ 0.51
MBD1-217ENST00000588937 BRPF3Q9ULD4 1205 aa18.25■□□□□ 0.51
MBD1-217ENST00000588937 ZBTB1Q9Y2K1 713 aa18.25■□□□□ 0.51
MBD1-217ENST00000588937 CICQ96RK0 1608 aaPredicted RBP18.25■□□□□ 0.51
MBD1-217ENST00000588937 PRPF40AO75400 957 aaKnown RBP18.25■□□□□ 0.51
MBD1-217ENST00000588937 HLFQ16534 295 aa18.25■□□□□ 0.51
MBD1-217ENST00000588937 GOLIM4O00461 696 aa18.24■□□□□ 0.51
MBD1-217ENST00000588937 XRCC6P12956 609 aaKnown RBP eCLIP18.24■□□□□ 0.512e-6■■■■■ 29.9
MBD1-217ENST00000588937 CPA1P15085 419 aa18.24■□□□□ 0.51
MBD1-217ENST00000588937 PUS3Q9BZE2 481 aaKnown RBP18.24■□□□□ 0.51
MBD1-217ENST00000588937 NUP98P52948 1817 aa18.24■□□□□ 0.51
MBD1-217ENST00000588937 MYH3P11055 1940 aa18.24■□□□□ 0.51
MBD1-217ENST00000588937 MBD3O95983 291 aa18.23■□□□□ 0.51
MBD1-217ENST00000588937 RPS6KB1P23443 525 aa18.23■□□□□ 0.51
MBD1-217ENST00000588937 GORABQ5T7V8 394 aa18.23■□□□□ 0.51
MBD1-217ENST00000588937 DZIP3Q86Y13 1208 aaKnown RBP18.23■□□□□ 0.51
MBD1-217ENST00000588937 GRPEL1Q9HAV7 217 aa18.23■□□□□ 0.51
MBD1-217ENST00000588937 ZNF831Q5JPB2 1677 aa18.22■□□□□ 0.51
MBD1-217ENST00000588937 ABCC12Q96J65 1359 aa18.22■□□□□ 0.51
MBD1-217ENST00000588937 GPTP24298 496 aa18.22■□□□□ 0.51
MBD1-217ENST00000588937 NDUFB9Q9Y6M9 179 aa18.22■□□□□ 0.51
MBD1-217ENST00000588937 ANKRD18BA2A2Z9 1011 aa18.22■□□□□ 0.51
MBD1-217ENST00000588937 NCLP19338 710 aaKnown RBP18.22■□□□□ 0.51
MBD1-217ENST00000588937 CTSWP56202 376 aa18.22■□□□□ 0.51
MBD1-217ENST00000588937 TTC39AQ5SRH9 613 aa18.22■□□□□ 0.51
MBD1-217ENST00000588937 FOXD4L5Q5VV16 416 aaPredicted RBP18.22■□□□□ 0.51
MBD1-217ENST00000588937 FOXD4L4Q8WXT5 416 aaPredicted RBP18.22■□□□□ 0.51
MBD1-217ENST00000588937 AK7Q96M32 723 aa18.22■□□□□ 0.51
MBD1-217ENST00000588937 ATP6V1DQ9Y5K8 247 aa18.22■□□□□ 0.51
MBD1-217ENST00000588937 PDE8AO60658 829 aa18.21■□□□□ 0.51
MBD1-217ENST00000588937 CCDC83Q8IWF9 413 aa18.21■□□□□ 0.51
MBD1-217ENST00000588937 TTLL11Q8NHH1 800 aa18.21■□□□□ 0.51
MBD1-217ENST00000588937 DSCC1Q9BVC3 393 aa18.21■□□□□ 0.51
MBD1-217ENST00000588937 TRMT112Q9UI30 125 aaKnown RBP18.21■□□□□ 0.51
MBD1-217ENST00000588937 IRS4O14654 1257 aaPredicted RBP18.2■□□□□ 0.5
MBD1-217ENST00000588937 STX6O43752 255 aa18.2■□□□□ 0.5
MBD1-217ENST00000588937 ZSCAN22P10073 491 aaPredicted RBP18.2■□□□□ 0.5
MBD1-217ENST00000588937 ZMYM1Q5SVZ6 1142 aa18.2■□□□□ 0.5
MBD1-217ENST00000588937 XAGE2Q96GT9 111 aa18.2■□□□□ 0.5
MBD1-217ENST00000588937 RNF113AO15541 343 aaKnown RBP18.19■□□□□ 0.5
MBD1-217ENST00000588937 ZFYP08048 801 aaPredicted RBP18.19■□□□□ 0.5
MBD1-217ENST00000588937 ITGA6P23229 1130 aa18.19■□□□□ 0.5
MBD1-217ENST00000588937 ZNF445P59923 1031 aa18.19■□□□□ 0.5
MBD1-217ENST00000588937 ME3Q16798 604 aa18.19■□□□□ 0.5
MBD1-217ENST00000588937 ZNF34Q8IZ26 560 aa18.19■□□□□ 0.5
MBD1-217ENST00000588937 NEK1Q96PY6 1258 aa18.19■□□□□ 0.5
MBD1-217ENST00000588937 LARP6Q9BRS8 491 aaKnown RBP18.19■□□□□ 0.5
MBD1-217ENST00000588937 CCDC87Q9NVE4 849 aa18.19■□□□□ 0.5
MBD1-217ENST00000588937 LARGE1O95461 756 aa18.19■□□□□ 0.5
MBD1-217ENST00000588937 HMGB1P09429 215 aaKnown RBP18.19■□□□□ 0.5
MBD1-217ENST00000588937 SYT1P21579 422 aa18.19■□□□□ 0.5
MBD1-217ENST00000588937 GJB2P29033 226 aa18.19■□□□□ 0.5
MBD1-217ENST00000588937 EIF5P55010 431 aaKnown RBP18.19■□□□□ 0.5
MBD1-217ENST00000588937 METTL24Q5JXM2 366 aa18.19■□□□□ 0.5
MBD1-217ENST00000588937 CAVIN1Q6NZI2 390 aaKnown RBP18.19■□□□□ 0.5
MBD1-217ENST00000588937 LDHAL6AQ6ZMR3 332 aa18.19■□□□□ 0.5
MBD1-217ENST00000588937 CCDC129Q6ZRS4 1044 aa18.19■□□□□ 0.5
MBD1-217ENST00000588937 RIPOR2Q9Y4F9 1068 aa18.19■□□□□ 0.5
MBD1-217ENST00000588937 ATP6V1AP38606 617 aa18.18■□□□□ 0.5
MBD1-217ENST00000588937 SMARCC1Q92922 1105 aaPredicted RBP18.18■□□□□ 0.5
MBD1-217ENST00000588937 CCDC85AQ96PX6 553 aaPredicted RBP18.18■□□□□ 0.5
MBD1-217ENST00000588937 SEC62Q99442 399 aaKnown RBP18.18■□□□□ 0.5
MBD1-217ENST00000588937 CNNM1Q9NRU3 951 aa18.18■□□□□ 0.5
MBD1-217ENST00000588937 TPCN1Q9ULQ1 816 aa18.18■□□□□ 0.5
MBD1-217ENST00000588937 TBC1D2BQ9UPU7 963 aa18.18■□□□□ 0.5
MBD1-217ENST00000588937 RREB1Q92766 1687 aa18.17■□□□□ 0.5
MBD1-217ENST00000588937 HSP90B1P14625 803 aaKnown RBP18.17■□□□□ 0.5
MBD1-217ENST00000588937 ATP2B3Q16720 1220 aa18.17■□□□□ 0.5
MBD1-217ENST00000588937 GPT2Q8TD30 523 aa18.17■□□□□ 0.5
MBD1-217ENST00000588937 GREM2Q9H772 168 aa18.17■□□□□ 0.5
MBD1-217ENST00000588937 QTRT2Q9H974 415 aaKnown RBP18.17■□□□□ 0.5
MBD1-217ENST00000588937 NHSQ6T4R5 1651 aa18.17■□□□□ 0.5
MBD1-217ENST00000588937 LOC102724428A0A0B4J2F2 783 aa18.17■□□□□ 0.5
MBD1-217ENST00000588937 A0A0G2JS52 829 aa18.17■□□□□ 0.5
MBD1-217ENST00000588937 SIK1P57059 783 aa18.17■□□□□ 0.5
MBD1-217ENST00000588937 FKBP4Q02790 459 aaKnown RBP eCLIP18.17■□□□□ 0.5
MBD1-217ENST00000588937 RIC1Q4ADV7 1423 aa18.16■□□□□ 0.5
MBD1-217ENST00000588937 SBF2Q86WG5 1849 aa18.16■□□□□ 0.5
MBD1-217ENST00000588937 PDCP20941 246 aa18.16■□□□□ 0.5
MBD1-217ENST00000588937 ZSCAN23Q3MJ62 389 aa18.16■□□□□ 0.5
MBD1-217ENST00000588937 INTS5Q6P9B9 1019 aaKnown RBP18.16■□□□□ 0.5
MBD1-217ENST00000588937 SYAP1Q96A49 352 aaPredicted RBP18.16■□□□□ 0.5
MBD1-217ENST00000588937 F13A1P00488 732 aa18.15■□□□□ 0.5
MBD1-217ENST00000588937 CYP21A2P08686 494 aa18.15■□□□□ 0.5
MBD1-217ENST00000588937 ADORA1P30542 326 aa18.15■□□□□ 0.5
MBD1-217ENST00000588937 CRKLP46109 303 aaKnown RBP18.15■□□□□ 0.5
MBD1-217ENST00000588937 TOB2Q14106 344 aaPredicted RBP18.15■□□□□ 0.5
MBD1-217ENST00000588937 CSPP1Q1MSJ5 1256 aa18.15■□□□□ 0.5
MBD1-217ENST00000588937 PARP10Q53GL7 1025 aa18.15■□□□□ 0.5
MBD1-217ENST00000588937 GAS2L3Q86XJ1 694 aa18.15■□□□□ 0.5
MBD1-217ENST00000588937 SYNE4Q8N205 404 aa18.15■□□□□ 0.5
MBD1-217ENST00000588937 TMEM87AQ8NBN3 555 aa18.15■□□□□ 0.5
MBD1-217ENST00000588937 ACSBG1Q96GR2 724 aa18.15■□□□□ 0.5
MBD1-217ENST00000588937 ZNF512BQ96KM6 892 aaPredicted RBP18.15■□□□□ 0.5
MBD1-217ENST00000588937 MAST3O60307 1309 aa18.14■□□□□ 0.5
MBD1-217ENST00000588937 UBN2Q6ZU65 1347 aa18.14■□□□□ 0.5
MBD1-217ENST00000588937 ZSCAN25Q6NSZ9 544 aa18.14■□□□□ 0.49
MBD1-217ENST00000588937 NECAB1Q8N987 351 aa18.14■□□□□ 0.49
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