RNA–Protein interactions for RNA: ENST00000588738.5

ERCC1-207, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-207ENST00000588738 XDHP47989 1333 aa23.65■■□□□ 1.38
ERCC1-207ENST00000588738 TBC1D16Q8TBP0 767 aa23.65■■□□□ 1.38
ERCC1-207ENST00000588738 KAZALD1Q96I82 304 aa23.65■■□□□ 1.38
ERCC1-207ENST00000588738 GGA1Q9UJY5 639 aa23.65■■□□□ 1.38
ERCC1-207ENST00000588738 MINPP1Q9UNW1 487 aa23.65■■□□□ 1.38
ERCC1-207ENST00000588738 TRIM27P14373 513 aa23.64■■□□□ 1.37
ERCC1-207ENST00000588738 VEGFAP15692 232 aaPredicted RBP23.64■■□□□ 1.37
ERCC1-207ENST00000588738 ZKSCAN2Q63HK3 967 aa23.64■■□□□ 1.37
ERCC1-207ENST00000588738 INTS3Q68E01 1043 aaKnown RBP23.64■■□□□ 1.37
ERCC1-207ENST00000588738 BICC1Q9H694 974 aaKnown RBP23.64■■□□□ 1.37
ERCC1-207ENST00000588738 WDR90Q96KV7 1748 aa23.64■■□□□ 1.37
ERCC1-207ENST00000588738 ZNF541Q9H0D2 1346 aa23.63■■□□□ 1.37
ERCC1-207ENST00000588738 UFL1O94874 794 aa23.63■■□□□ 1.37
ERCC1-207ENST00000588738 TAF7LQ5H9L4 462 aa23.63■■□□□ 1.37
ERCC1-207ENST00000588738 C16orf71Q8IYS4 520 aaPredicted RBP23.63■■□□□ 1.37
ERCC1-207ENST00000588738 ZNRF3Q9ULT6 936 aa23.63■■□□□ 1.37
ERCC1-207ENST00000588738 HDAC5Q9UQL6 1122 aa23.63■■□□□ 1.37
ERCC1-207ENST00000588738 RIMBP2O15034 1052 aa23.62■■□□□ 1.37
ERCC1-207ENST00000588738 UBTFL1P0CB47 393 aaPredicted RBP23.62■■□□□ 1.37
ERCC1-207ENST00000588738 ATP2B4P23634 1241 aa23.62■■□□□ 1.37
ERCC1-207ENST00000588738 GPC2Q8N158 579 aa23.62■■□□□ 1.37
ERCC1-207ENST00000588738 ZC3H12CQ9C0D7 883 aaKnown RBP23.62■■□□□ 1.37
ERCC1-207ENST00000588738 RABL6Q3YEC7 729 aaPredicted RBP23.61■■□□□ 1.37
ERCC1-207ENST00000588738 CLUAP1Q96AJ1 413 aa23.61■■□□□ 1.37
ERCC1-207ENST00000588738 ANKRD2Q9GZV1 360 aa23.61■■□□□ 1.37
ERCC1-207ENST00000588738 L3MBTL3Q96JM7 780 aaPredicted RBP23.6■■□□□ 1.37
ERCC1-207ENST00000588738 TOMM70O94826 608 aa23.59■■□□□ 1.37
ERCC1-207ENST00000588738 C1QTNF8P60827 252 aa23.59■■□□□ 1.37
ERCC1-207ENST00000588738 LDHAL6AQ6ZMR3 332 aa23.59■■□□□ 1.37
ERCC1-207ENST00000588738 ANKRD44Q8N8A2 993 aa23.59■■□□□ 1.37
ERCC1-207ENST00000588738 ZNF594Q96JF6 807 aaPredicted RBP23.59■■□□□ 1.37
ERCC1-207ENST00000588738 GJA3Q9Y6H8 435 aa23.59■■□□□ 1.37
ERCC1-207ENST00000588738 SCN4AP35499 1836 aa23.59■■□□□ 1.37
ERCC1-207ENST00000588738 IQCA1LA6NCM1 817 aa23.58■■□□□ 1.37
ERCC1-207ENST00000588738 POTECB2RU33 542 aa23.58■■□□□ 1.37
ERCC1-207ENST00000588738 G3V3G9 751 aa23.58■■□□□ 1.37
ERCC1-207ENST00000588738 DCAF8Q5TAQ9 597 aa23.58■■□□□ 1.37
ERCC1-207ENST00000588738 GPR101Q96P66 508 aaPredicted RBP23.58■■□□□ 1.37
ERCC1-207ENST00000588738 TNNQ9UQP3 1299 aa23.58■■□□□ 1.37
ERCC1-207ENST00000588738 LEMD3Q9Y2U8 911 aa23.58■■□□□ 1.37
ERCC1-207ENST00000588738 GNAI3P08754 354 aa23.57■■□□□ 1.36
ERCC1-207ENST00000588738 CHRNDQ07001 517 aa23.57■■□□□ 1.36
ERCC1-207ENST00000588738 CXCL9Q07325 125 aa23.57■■□□□ 1.36
ERCC1-207ENST00000588738 DBNDD1Q9H9R9 158 aa23.57■■□□□ 1.36
ERCC1-207ENST00000588738 CNNM1Q9NRU3 951 aa23.57■■□□□ 1.36
ERCC1-207ENST00000588738 TNIP1Q15025 636 aa23.56■■□□□ 1.36
ERCC1-207ENST00000588738 DOK7Q18PE1 504 aa23.56■■□□□ 1.36
ERCC1-207ENST00000588738 FTSJ3Q8IY81 847 aaKnown RBP23.56■■□□□ 1.36
ERCC1-207ENST00000588738 MEIS3Q99687 375 aa23.56■■□□□ 1.36
ERCC1-207ENST00000588738 ECE2O60344 883 aa23.55■■□□□ 1.36
ERCC1-207ENST00000588738 CIAPIN1Q6FI81 312 aa23.55■■□□□ 1.36
ERCC1-207ENST00000588738 YDJCA8MPS7 323 aa23.54■■□□□ 1.36
ERCC1-207ENST00000588738 RAD17O75943 681 aa23.54■■□□□ 1.36
ERCC1-207ENST00000588738 KCNJ4P48050 445 aa23.54■■□□□ 1.36
ERCC1-207ENST00000588738 DZIP1LQ8IYY4 767 aaKnown RBP23.54■■□□□ 1.36
ERCC1-207ENST00000588738 TMEM57Q8N5G2 664 aa23.54■■□□□ 1.36
ERCC1-207ENST00000588738 RBM46Q8TBY0 533 aaKnown RBP23.54■■□□□ 1.36
ERCC1-207ENST00000588738 HACL1Q9UJ83 578 aa23.54■■□□□ 1.36
ERCC1-207ENST00000588738 RCAN3Q9UKA8 241 aa23.54■■□□□ 1.36
ERCC1-207ENST00000588738 LRRFIP2Q9Y608 721 aaKnown RBP23.54■■□□□ 1.36
ERCC1-207ENST00000588738 ZNF804BA4D1E1 1349 aa23.54■■□□□ 1.36
ERCC1-207ENST00000588738 MED23Q9ULK4 1368 aa23.53■■□□□ 1.36
ERCC1-207ENST00000588738 A0A1B0GUL6 1792 aa23.53■■□□□ 1.36
ERCC1-207ENST00000588738 WTIPA6NIX2 430 aaPredicted RBP23.53■■□□□ 1.36
ERCC1-207ENST00000588738 HELBQ8NG08 1087 aaPredicted RBP23.53■■□□□ 1.36
ERCC1-207ENST00000588738 TAF5LO75529 589 aa23.52■■□□□ 1.36
ERCC1-207ENST00000588738 LMOD1P29536 600 aaPredicted RBP23.52■■□□□ 1.36
ERCC1-207ENST00000588738 YTHDC1Q96MU7 727 aaKnown RBP23.52■■□□□ 1.36
ERCC1-207ENST00000588738 PLIN1O60240 522 aa23.51■■□□□ 1.35
ERCC1-207ENST00000588738 PUS3Q9BZE2 481 aaKnown RBP23.51■■□□□ 1.35
ERCC1-207ENST00000588738 TAF1DQ9H5J8 278 aaPredicted RBP23.51■■□□□ 1.35
ERCC1-207ENST00000588738 MS4A1P11836 297 aa23.5■■□□□ 1.35
ERCC1-207ENST00000588738 PODNQ7Z5L7 613 aa23.5■■□□□ 1.35
ERCC1-207ENST00000588738 RIPOR2Q9Y4F9 1068 aa23.5■■□□□ 1.35
ERCC1-207ENST00000588738 MROH5Q6ZUA9 1318 aa23.5■■□□□ 1.35
ERCC1-207ENST00000588738 EPHX2P34913 555 aa23.49■■□□□ 1.35
ERCC1-207ENST00000588738 SCNN1DP51172 638 aa23.49■■□□□ 1.35
ERCC1-207ENST00000588738 PSMD14O00487 310 aa23.48■■□□□ 1.35
ERCC1-207ENST00000588738 GNAI2P04899 355 aa23.48■■□□□ 1.35
ERCC1-207ENST00000588738 RLBP1P12271 317 aa23.48■■□□□ 1.35
ERCC1-207ENST00000588738 FSTL1Q12841 308 aa23.48■■□□□ 1.35
ERCC1-207ENST00000588738 PNMA8AQ86V59 439 aaPredicted RBP23.48■■□□□ 1.35
ERCC1-207ENST00000588738 TXNRD3Q86VQ6 643 aa23.48■■□□□ 1.35
ERCC1-207ENST00000588738 ITPRIPQ8IWB1 547 aa23.48■■□□□ 1.35
ERCC1-207ENST00000588738 SMC1BQ8NDV3 1235 aa23.48■■□□□ 1.35
ERCC1-207ENST00000588738 KLHDC4Q8TBB5 520 aa23.48■■□□□ 1.35
ERCC1-207ENST00000588738 COA1Q9GZY4 146 aa23.48■■□□□ 1.35
ERCC1-207ENST00000588738 KCNQ5Q9NR82 932 aa23.48■■□□□ 1.35
ERCC1-207ENST00000588738 SCN9AQ15858 1988 aa23.47■■□□□ 1.35
ERCC1-207ENST00000588738 RFX5P48382 616 aaPredicted RBP23.47■■□□□ 1.35
ERCC1-207ENST00000588738 GMPSP49915 693 aaPredicted RBP23.47■■□□□ 1.35
ERCC1-207ENST00000588738 LRRC24Q50LG9 513 aa23.47■■□□□ 1.35
ERCC1-207ENST00000588738 GPRC5DQ9NZD1 345 aa23.47■■□□□ 1.35
ERCC1-207ENST00000588738 SNAP23O00161 211 aa23.46■■□□□ 1.35
ERCC1-207ENST00000588738 EPS15P42566 896 aa23.46■■□□□ 1.35
ERCC1-207ENST00000588738 PTPN12Q05209 780 aaKnown RBP23.46■■□□□ 1.35
ERCC1-207ENST00000588738 UBE4AQ14139 1066 aa23.46■■□□□ 1.35
ERCC1-207ENST00000588738 PSME4Q14997 1843 aa23.46■■□□□ 1.35
ERCC1-207ENST00000588738 C15orf52Q6ZUT6 534 aaKnown RBP23.46■■□□□ 1.35
ERCC1-207ENST00000588738 VIL1P09327 827 aaKnown RBP23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms