RNA–Protein interactions for RNA: ENST00000588534.1

ZNF554-202, Transcript of zinc finger protein 554, humanhuman

TSL 2

Gene ZNF554, Length 4,029 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-202ENST00000588534 WDR66Q8TBY9 1149 aa8.9□□□□□ -0.99
ZNF554-202ENST00000588534 SLC16A10Q8TF71 515 aa8.9□□□□□ -0.99
ZNF554-202ENST00000588534 TBC1D22AQ8WUA7 517 aa8.9□□□□□ -0.99
ZNF554-202ENST00000588534 NAPBQ9H115 298 aa8.9□□□□□ -0.99
ZNF554-202ENST00000588534 LEMD3Q9Y2U8 911 aa8.9□□□□□ -0.99
ZNF554-202ENST00000588534 CARMIL3Q8ND23 1372 aa8.9□□□□□ -0.99
ZNF554-202ENST00000588534 IBTKQ9P2D0 1353 aaPredicted RBP8.9□□□□□ -0.99
ZNF554-202ENST00000588534 KDM6AO15550 1401 aaPredicted RBP8.9□□□□□ -0.99
ZNF554-202ENST00000588534 ROBO1Q9Y6N7 1651 aa8.9□□□□□ -0.99
ZNF554-202ENST00000588534 H3BQV1 296 aa8.89□□□□□ -0.99
ZNF554-202ENST00000588534 MAP4K4O95819 1239 aaPredicted RBP8.89□□□□□ -0.99
ZNF554-202ENST00000588534 HIBADHP31937 336 aaKnown RBP8.89□□□□□ -0.99
ZNF554-202ENST00000588534 IFFO2Q5TF58 517 aa8.89□□□□□ -0.99
ZNF554-202ENST00000588534 JDP2Q8WYK2 163 aa8.89□□□□□ -0.99
ZNF554-202ENST00000588534 CRNKL1Q9BZJ0 848 aaKnown RBP8.89□□□□□ -0.99
ZNF554-202ENST00000588534 NBPF26B4DH59 902 aa8.89□□□□□ -0.99
ZNF554-202ENST00000588534 SEMA3EO15041 775 aa8.89□□□□□ -0.99
ZNF554-202ENST00000588534 IGSF3O75054 1194 aa8.89□□□□□ -0.99
ZNF554-202ENST00000588534 SDSP20132 328 aa8.89□□□□□ -0.99
ZNF554-202ENST00000588534 USP5P45974 858 aa8.89□□□□□ -0.99
ZNF554-202ENST00000588534 NEK4P51957 841 aa8.89□□□□□ -0.99
ZNF554-202ENST00000588534 NBPF10Q6P3W6 841 aaKnown RBP8.89□□□□□ -0.99
ZNF554-202ENST00000588534 NBPF15Q8N660 670 aa8.89□□□□□ -0.99
ZNF554-202ENST00000588534 UBE2Q2Q8WVN8 375 aa8.89□□□□□ -0.99
ZNF554-202ENST00000588534 PLA2G12BQ9BX93 195 aa8.89□□□□□ -0.99
ZNF554-202ENST00000588534 SMC3Q9UQE7 1217 aa8.89□□□□□ -0.99
ZNF554-202ENST00000588534 ATP5JP18859 108 aa8.89□□□□□ -0.99
ZNF554-202ENST00000588534 ANAPC15P60006 121 aa8.89□□□□□ -0.99
ZNF554-202ENST00000588534 MCMDC2Q4G0Z9 681 aa8.89□□□□□ -0.99
ZNF554-202ENST00000588534 CCDC178Q5BJE1 867 aa8.89□□□□□ -0.99
ZNF554-202ENST00000588534 CTDP1Q9Y5B0 961 aaPredicted RBP8.89□□□□□ -0.99
ZNF554-202ENST00000588534 POLA2Q14181 598 aa8.89□□□□□ -0.99
ZNF554-202ENST00000588534 CWC22Q9HCG8 908 aaKnown RBP8.89□□□□□ -0.99
ZNF554-202ENST00000588534 IGKV5-2P06315 115 aa8.88□□□□□ -0.99
ZNF554-202ENST00000588534 DPP8Q6V1X1 898 aaPredicted RBP8.88□□□□□ -0.99
ZNF554-202ENST00000588534 OGFOD1Q8N543 542 aa8.88□□□□□ -0.99
ZNF554-202ENST00000588534 ARHGEF1Q92888 912 aaKnown RBP8.88□□□□□ -0.99
ZNF554-202ENST00000588534 HELLSQ9NRZ9 838 aa8.88□□□□□ -0.99
ZNF554-202ENST00000588534 PLSCR1O15162 318 aa8.88□□□□□ -0.99
ZNF554-202ENST00000588534 RNF113AO15541 343 aaKnown RBP8.88□□□□□ -0.99
ZNF554-202ENST00000588534 MYO1BO43795 1136 aa8.88□□□□□ -0.99
ZNF554-202ENST00000588534 SAFBQ15424 915 aaKnown RBP eCLIP8.88□□□□□ -0.99
ZNF554-202ENST00000588534 TBC1D9Q6ZT07 1266 aa8.88□□□□□ -0.99
ZNF554-202ENST00000588534 ZNF213O14771 459 aa8.88□□□□□ -0.99
ZNF554-202ENST00000588534 CDKL5O76039 1030 aa8.88□□□□□ -0.99
ZNF554-202ENST00000588534 NAA16Q6N069 864 aaPredicted RBP8.88□□□□□ -0.99
ZNF554-202ENST00000588534 MPNDQ8N594 471 aa8.88□□□□□ -0.99
ZNF554-202ENST00000588534 SYAP1Q96A49 352 aaPredicted RBP8.88□□□□□ -0.99
ZNF554-202ENST00000588534 XAGE2Q96GT9 111 aa8.88□□□□□ -0.99
ZNF554-202ENST00000588534 UBAC1Q9BSL1 405 aa8.88□□□□□ -0.99
ZNF554-202ENST00000588534 CHMP5Q9NZZ3 219 aa8.88□□□□□ -0.99
ZNF554-202ENST00000588534 UFL1O94874 794 aa8.87□□□□□ -0.99
ZNF554-202ENST00000588534 NPR1P16066 1061 aa8.87□□□□□ -0.99
ZNF554-202ENST00000588534 C2CD5Q86YS7 1000 aa8.87□□□□□ -0.99
ZNF554-202ENST00000588534 ADCY9O60503 1353 aa8.87□□□□□ -0.99
ZNF554-202ENST00000588534 PDE8BO95263 885 aa8.87□□□□□ -0.99
ZNF554-202ENST00000588534 SUSD4Q5VX71 490 aa8.87□□□□□ -0.99
ZNF554-202ENST00000588534 STAP2Q9UGK3 403 aa8.87□□□□□ -0.99
ZNF554-202ENST00000588534 POLR3DP05423 398 aaPredicted RBP8.87□□□□□ -0.99
ZNF554-202ENST00000588534 ZNF34Q8IZ26 560 aa8.87□□□□□ -0.99
ZNF554-202ENST00000588534 OSBPL3Q9H4L5 887 aa8.87□□□□□ -0.99
ZNF554-202ENST00000588534 XDHP47989 1333 aa8.86□□□□□ -0.99
ZNF554-202ENST00000588534 HLA-DOAP06340 250 aa8.86□□□□□ -0.99
ZNF554-202ENST00000588534 LDHBP07195 334 aaKnown RBP8.86□□□□□ -0.99
ZNF554-202ENST00000588534 NOL8Q76FK4 1167 aaKnown RBP8.86□□□□□ -0.99
ZNF554-202ENST00000588534 ESYT1Q9BSJ8 1104 aa8.86□□□□□ -0.99
ZNF554-202ENST00000588534 BRMS1Q9HCU9 246 aa8.86□□□□□ -0.99
ZNF554-202ENST00000588534 SNRKQ9NRH2 765 aa8.86□□□□□ -0.99
ZNF554-202ENST00000588534 CYP7A1P22680 504 aa8.86□□□□□ -0.99
ZNF554-202ENST00000588534 SLC9C2Q5TAH2 1124 aa8.86□□□□□ -0.99
ZNF554-202ENST00000588534 TTLL11Q8NHH1 800 aa8.86□□□□□ -0.99
ZNF554-202ENST00000588534 CNNM2Q9H8M5 875 aa8.86□□□□□ -0.99
ZNF554-202ENST00000588534 PDRG1Q9NUG6 133 aa8.86□□□□□ -0.99
ZNF554-202ENST00000588534 SLIT2O94813 1529 aa8.86□□□□□ -0.99
ZNF554-202ENST00000588534 CCDC196A0A1B0GTZ2 297 aa8.86□□□□□ -0.99
ZNF554-202ENST00000588534 CAMTA2O94983 1202 aa8.86□□□□□ -0.99
ZNF554-202ENST00000588534 TIMM10P62072 90 aa8.86□□□□□ -0.99
ZNF554-202ENST00000588534 PDE4BQ07343 736 aa8.86□□□□□ -0.99
ZNF554-202ENST00000588534 GRAPQ13588 217 aa8.86□□□□□ -0.99
ZNF554-202ENST00000588534 PDIA6Q15084 440 aa8.86□□□□□ -0.99
ZNF554-202ENST00000588534 HLFQ16534 295 aa8.86□□□□□ -0.99
ZNF554-202ENST00000588534 IQCA1Q86XH1 822 aa8.86□□□□□ -0.99
ZNF554-202ENST00000588534 ZSCAN29Q8IWY8 852 aaPredicted RBP8.86□□□□□ -0.99
ZNF554-202ENST00000588534 KBTBD3Q8NAB2 608 aa8.86□□□□□ -0.99
ZNF554-202ENST00000588534 GRAPLQ8TC17 118 aaPredicted RBP8.86□□□□□ -0.99
ZNF554-202ENST00000588534 DBNDD2Q9BQY9 259 aa8.86□□□□□ -0.99
ZNF554-202ENST00000588534 SLKQ9H2G2 1235 aaPredicted RBP8.86□□□□□ -0.99
ZNF554-202ENST00000588534 GREM2Q9H772 168 aa8.86□□□□□ -0.99
ZNF554-202ENST00000588534 SH2B1Q9NRF2 756 aaPredicted RBP8.86□□□□□ -0.99
ZNF554-202ENST00000588534 BSDC1Q9NW68 430 aaPredicted RBP8.86□□□□□ -0.99
ZNF554-202ENST00000588534 FAM208AQ9UK61 1670 aaKnown RBP8.86□□□□□ -0.99
ZNF554-202ENST00000588534 UTYO14607 1347 aa8.85□□□□□ -0.99
ZNF554-202ENST00000588534 CCDC69A6NI79 296 aa8.85□□□□□ -0.99
ZNF554-202ENST00000588534 RABL6Q3YEC7 729 aaPredicted RBP8.85□□□□□ -0.99
ZNF554-202ENST00000588534 ERFEQ4G0M1 354 aa8.85□□□□□ -0.99
ZNF554-202ENST00000588534 TRIM22Q8IYM9 498 aa8.85□□□□□ -0.99
ZNF554-202ENST00000588534 HELBQ8NG08 1087 aaPredicted RBP8.85□□□□□ -0.99
ZNF554-202ENST00000588534 MASTLQ96GX5 879 aa8.85□□□□□ -0.99
ZNF554-202ENST00000588534 ZNF594Q96JF6 807 aaPredicted RBP8.85□□□□□ -0.99
ZNF554-202ENST00000588534 JAKMIP1Q96N16 626 aaKnown RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms