RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 KLRG2A4D1S0 409 aaPredicted RBP13.91□□□□□ -0.18
VMP1-207ENST00000588131 IGHMBP2P38935 993 aaKnown RBP13.91□□□□□ -0.18
VMP1-207ENST00000588131 PDE1AP54750 535 aa13.91□□□□□ -0.18
VMP1-207ENST00000588131 TSHZ3Q63HK5 1081 aa13.91□□□□□ -0.18
VMP1-207ENST00000588131 ANKRD18AQ8IVF6 992 aa13.91□□□□□ -0.18
VMP1-207ENST00000588131 MPHOSPH8Q99549 860 aa13.91□□□□□ -0.18
VMP1-207ENST00000588131 BRIP1Q9BX63 1249 aa13.91□□□□□ -0.18
VMP1-207ENST00000588131 CCDC8Q9H0W5 538 aaPredicted RBP13.91□□□□□ -0.18
VMP1-207ENST00000588131 PSDA5PKW4 1024 aaPredicted RBP13.9□□□□□ -0.18
VMP1-207ENST00000588131 ZBTB7AO95365 584 aa13.9□□□□□ -0.18
VMP1-207ENST00000588131 MX1P20591 662 aa13.9□□□□□ -0.18
VMP1-207ENST00000588131 METTL24Q5JXM2 366 aa13.9□□□□□ -0.18
VMP1-207ENST00000588131 DDX46Q7L014 1031 aaKnown RBP13.9□□□□□ -0.18
VMP1-207ENST00000588131 PELP1Q8IZL8 1130 aaKnown RBP13.9□□□□□ -0.18
VMP1-207ENST00000588131 VGLL2Q8N8G2 317 aa13.9□□□□□ -0.18
VMP1-207ENST00000588131 OSBPL3Q9H4L5 887 aa13.9□□□□□ -0.18
VMP1-207ENST00000588131 CEP126Q9P2H0 1117 aa13.9□□□□□ -0.18
VMP1-207ENST00000588131 STAP2Q9UGK3 403 aa13.9□□□□□ -0.18
VMP1-207ENST00000588131 IFIT2P09913 472 aaKnown RBP13.89□□□□□ -0.19
VMP1-207ENST00000588131 GSPT1P15170 499 aaKnown RBP13.89□□□□□ -0.19
VMP1-207ENST00000588131 RPGRQ92834 1020 aaKnown RBP13.89□□□□□ -0.19
VMP1-207ENST00000588131 GPR108Q9NPR9 543 aa13.89□□□□□ -0.19
VMP1-207ENST00000588131 DBNLQ9UJU6 430 aaKnown RBP13.89□□□□□ -0.19
VMP1-207ENST00000588131 MROH5Q6ZUA9 1318 aa13.89□□□□□ -0.19
VMP1-207ENST00000588131 ARAP2Q8WZ64 1704 aa13.88□□□□□ -0.19
VMP1-207ENST00000588131 A0A1B0GUL7 405 aa13.88□□□□□ -0.19
VMP1-207ENST00000588131 TIMM10P62072 90 aa13.88□□□□□ -0.19
VMP1-207ENST00000588131 RPS8P62241 208 aaKnown RBP13.88□□□□□ -0.19
VMP1-207ENST00000588131 CHRNDQ07001 517 aa13.88□□□□□ -0.19
VMP1-207ENST00000588131 GRAPQ13588 217 aa13.88□□□□□ -0.19
VMP1-207ENST00000588131 TTC22Q5TAA0 569 aa13.88□□□□□ -0.19
VMP1-207ENST00000588131 SLC51AQ86UW1 340 aa13.88□□□□□ -0.19
VMP1-207ENST00000588131 HELBQ8NG08 1087 aaPredicted RBP13.88□□□□□ -0.19
VMP1-207ENST00000588131 GRAPLQ8TC17 118 aaPredicted RBP13.88□□□□□ -0.19
VMP1-207ENST00000588131 RBM17Q96I25 401 aaKnown RBP13.88□□□□□ -0.19
VMP1-207ENST00000588131 DBNDD2Q9BQY9 259 aa13.88□□□□□ -0.19
VMP1-207ENST00000588131 BSDC1Q9NW68 430 aaPredicted RBP13.88□□□□□ -0.19
VMP1-207ENST00000588131 ATF5Q9Y2D1 282 aaPredicted RBP13.88□□□□□ -0.19
VMP1-207ENST00000588131 C10orf71Q711Q0 1435 aa13.88□□□□□ -0.19
VMP1-207ENST00000588131 TAF5LO75529 589 aa13.87□□□□□ -0.19
VMP1-207ENST00000588131 PDE8BO95263 885 aa13.87□□□□□ -0.19
VMP1-207ENST00000588131 HOXA10P31260 410 aaPredicted RBP13.87□□□□□ -0.19
VMP1-207ENST00000588131 PDE6BP35913 854 aa13.87□□□□□ -0.19
VMP1-207ENST00000588131 PI4K2BQ8TCG2 481 aa13.87□□□□□ -0.19
VMP1-207ENST00000588131 MTFR1LQ9H019 292 aa13.87□□□□□ -0.19
VMP1-207ENST00000588131 AOX1Q06278 1338 aa13.87□□□□□ -0.19
VMP1-207ENST00000588131 TTC41PQ6P2S7 1318 aa13.87□□□□□ -0.19
VMP1-207ENST00000588131 SNAP23O00161 211 aa13.86□□□□□ -0.19
VMP1-207ENST00000588131 SRGNP10124 158 aa13.86□□□□□ -0.19
VMP1-207ENST00000588131 ADORA1P30542 326 aa13.86□□□□□ -0.19
VMP1-207ENST00000588131 ATP2B3Q16720 1220 aa13.86□□□□□ -0.19
VMP1-207ENST00000588131 BMP2KLQ5H9B9 411 aa13.86□□□□□ -0.19
VMP1-207ENST00000588131 NEUROD6Q96NK8 337 aa13.86□□□□□ -0.19
VMP1-207ENST00000588131 CRAMP1Q96RY5 1269 aa13.86□□□□□ -0.19
VMP1-207ENST00000588131 ECHDC1Q9NTX5 307 aa13.86□□□□□ -0.19
VMP1-207ENST00000588131 MINPP1Q9UNW1 487 aa13.86□□□□□ -0.19
VMP1-207ENST00000588131 AKAP2Q9Y2D5 859 aa13.86□□□□□ -0.19
VMP1-207ENST00000588131 LRRC37AA6NMS7 1700 aa13.86□□□□□ -0.19
VMP1-207ENST00000588131 KIF13BQ9NQT8 1826 aa13.85□□□□□ -0.19
VMP1-207ENST00000588131 CACNA1SQ13698 1873 aa13.85□□□□□ -0.19
VMP1-207ENST00000588131 NPR1P16066 1061 aa13.85□□□□□ -0.19
VMP1-207ENST00000588131 FGFR2P21802 821 aa13.85□□□□□ -0.19
VMP1-207ENST00000588131 PUM3Q15397 648 aaKnown RBP13.85□□□□□ -0.19
VMP1-207ENST00000588131 C2CD5Q86YS7 1000 aa13.85□□□□□ -0.19
VMP1-207ENST00000588131 DLEC1Q9Y238 1755 aa13.84□□□□□ -0.19
VMP1-207ENST00000588131 WTIPA6NIX2 430 aaPredicted RBP13.84□□□□□ -0.19
VMP1-207ENST00000588131 CHRNA5P30532 468 aa13.84□□□□□ -0.19
VMP1-207ENST00000588131 C8orf34Q49A92 452 aa13.84□□□□□ -0.19
VMP1-207ENST00000588131 XAGE2Q96GT9 111 aa13.84□□□□□ -0.19
VMP1-207ENST00000588131 MASTLQ96GX5 879 aa13.84□□□□□ -0.19
VMP1-207ENST00000588131 GPATCH3Q96I76 525 aa13.84□□□□□ -0.19
VMP1-207ENST00000588131 KIAA1551Q9HCM1 1747 aa13.84□□□□□ -0.19
VMP1-207ENST00000588131 PPEF1O14829 653 aaPredicted RBP13.83□□□□□ -0.2
VMP1-207ENST00000588131 GLRX3O76003 335 aaKnown RBP13.83□□□□□ -0.2
VMP1-207ENST00000588131 SDSP20132 328 aa13.83□□□□□ -0.2
VMP1-207ENST00000588131 POLD1P28340 1107 aa13.83□□□□□ -0.2
VMP1-207ENST00000588131 LPIN2Q92539 896 aa13.83□□□□□ -0.2
VMP1-207ENST00000588131 SGIP1Q9BQI5 828 aa13.83□□□□□ -0.2
VMP1-207ENST00000588131 LTBP1Q14766 1721 aa13.82□□□□□ -0.2
VMP1-207ENST00000588131 H0YIN7 160 aa13.82□□□□□ -0.2
VMP1-207ENST00000588131 ERC2O15083 957 aa13.82□□□□□ -0.2
VMP1-207ENST00000588131 BBOX1O75936 387 aa13.82□□□□□ -0.2
VMP1-207ENST00000588131 MAP4K4O95819 1239 aaPredicted RBP13.82□□□□□ -0.2
VMP1-207ENST00000588131 SLC5A1P13866 664 aa13.82□□□□□ -0.2
VMP1-207ENST00000588131 ATP5JP18859 108 aa13.82□□□□□ -0.2
VMP1-207ENST00000588131 STYK1Q6J9G0 422 aa13.82□□□□□ -0.2
VMP1-207ENST00000588131 ANKRD2Q9GZV1 360 aa13.82□□□□□ -0.2
VMP1-207ENST00000588131 PTGER2P43116 358 aa13.81□□□□□ -0.2
VMP1-207ENST00000588131 GPSM2P81274 684 aa13.81□□□□□ -0.2
VMP1-207ENST00000588131 ZNF622Q969S3 477 aaKnown RBP eCLIP13.81□□□□□ -0.2
VMP1-207ENST00000588131 BOLA2Q9H3K6 86 aa13.81□□□□□ -0.2
VMP1-207ENST00000588131 SLX4Q8IY92 1834 aa13.8□□□□□ -0.2
VMP1-207ENST00000588131 TRIM6-TRIM34B2RNG4 842 aa13.8□□□□□ -0.2
VMP1-207ENST00000588131 IFIT1P09914 478 aaKnown RBP13.8□□□□□ -0.2
VMP1-207ENST00000588131 KLRK1P26718 216 aa13.8□□□□□ -0.2
VMP1-207ENST00000588131 ALDH1B1P30837 517 aa13.8□□□□□ -0.2
VMP1-207ENST00000588131 UBE4AQ14139 1066 aa13.8□□□□□ -0.2
VMP1-207ENST00000588131 TTC39AQ5SRH9 613 aa13.8□□□□□ -0.2
VMP1-207ENST00000588131 GORABQ5T7V8 394 aa13.8□□□□□ -0.2
VMP1-207ENST00000588131 BACH2Q9BYV9 841 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms