RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 GPC2Q8N158 579 aa12.72□□□□□ -0.37
TPM4-207ENST00000588032 TBC1D16Q8TBP0 767 aa12.72□□□□□ -0.37
TPM4-207ENST00000588032 POLLQ9UGP5 575 aa12.72□□□□□ -0.37
TPM4-207ENST00000588032 GGA1Q9UJY5 639 aa12.72□□□□□ -0.37
TPM4-207ENST00000588032 ZNRF3Q9ULT6 936 aa12.72□□□□□ -0.37
TPM4-207ENST00000588032 LRRC37AA6NMS7 1700 aa12.71□□□□□ -0.37
TPM4-207ENST00000588032 UTRNP46939 3433 aa12.71□□□□□ -0.37
TPM4-207ENST00000588032 IQCA1LA6NCM1 817 aa12.71□□□□□ -0.37
TPM4-207ENST00000588032 BCAR3O75815 825 aa12.71□□□□□ -0.37
TPM4-207ENST00000588032 RABL6Q3YEC7 729 aaPredicted RBP12.71□□□□□ -0.37
TPM4-207ENST00000588032 EPHA10Q5JZY3 1008 aa12.71□□□□□ -0.37
TPM4-207ENST00000588032 INTS3Q68E01 1043 aaKnown RBP12.71□□□□□ -0.37
TPM4-207ENST00000588032 ATF7IPQ6VMQ6 1270 aa12.71□□□□□ -0.37
TPM4-207ENST00000588032 SLC51AQ86UW1 340 aa12.71□□□□□ -0.37
TPM4-207ENST00000588032 SUCLG2Q96I99 432 aa12.71□□□□□ -0.37
TPM4-207ENST00000588032 L3MBTL3Q96JM7 780 aaPredicted RBP12.71□□□□□ -0.37
TPM4-207ENST00000588032 ZC3H12CQ9C0D7 883 aaKnown RBP12.71□□□□□ -0.37
TPM4-207ENST00000588032 ANKRD2Q9GZV1 360 aa12.71□□□□□ -0.37
TPM4-207ENST00000588032 MINPP1Q9UNW1 487 aa12.71□□□□□ -0.37
TPM4-207ENST00000588032 CHMP3Q9Y3E7 222 aa12.71□□□□□ -0.37
TPM4-207ENST00000588032 GOLGB1Q14789 3259 aaKnown RBP12.71□□□□□ -0.38
TPM4-207ENST00000588032 TIAM2Q8IVF5 1701 aa12.71□□□□□ -0.38
TPM4-207ENST00000588032 TAF1P21675 1872 aa12.7□□□□□ -0.38
TPM4-207ENST00000588032 UFL1O94874 794 aa12.7□□□□□ -0.38
TPM4-207ENST00000588032 TAF7LQ5H9L4 462 aa12.7□□□□□ -0.38
TPM4-207ENST00000588032 ZKSCAN2Q63HK3 967 aa12.7□□□□□ -0.38
TPM4-207ENST00000588032 FRAT1Q92837 279 aaPredicted RBP12.7□□□□□ -0.38
TPM4-207ENST00000588032 KAZALD1Q96I82 304 aa12.7□□□□□ -0.38
TPM4-207ENST00000588032 LEMD3Q9Y2U8 911 aa12.7□□□□□ -0.38
TPM4-207ENST00000588032 MYH3P11055 1940 aa12.7□□□□□ -0.38
TPM4-207ENST00000588032 ZNF541Q9H0D2 1346 aa12.69□□□□□ -0.38
TPM4-207ENST00000588032 POTECB2RU33 542 aa12.69□□□□□ -0.38
TPM4-207ENST00000588032 G3V3G9 751 aa12.69□□□□□ -0.38
TPM4-207ENST00000588032 UBTFL1P0CB47 393 aaPredicted RBP12.69□□□□□ -0.38
TPM4-207ENST00000588032 TRIM27P14373 513 aa12.69□□□□□ -0.38
TPM4-207ENST00000588032 TNIP1Q15025 636 aa12.69□□□□□ -0.38
TPM4-207ENST00000588032 DCAF8Q5TAQ9 597 aa12.69□□□□□ -0.38
TPM4-207ENST00000588032 RBM46Q8TBY0 533 aaKnown RBP12.69□□□□□ -0.38
TPM4-207ENST00000588032 BICC1Q9H694 974 aaKnown RBP12.69□□□□□ -0.38
TPM4-207ENST00000588032 RIMBP2O15034 1052 aa12.68□□□□□ -0.38
TPM4-207ENST00000588032 CXCL9Q07325 125 aa12.68□□□□□ -0.38
TPM4-207ENST00000588032 LDHAL6AQ6ZMR3 332 aa12.68□□□□□ -0.38
TPM4-207ENST00000588032 WDR90Q96KV7 1748 aa12.68□□□□□ -0.38
TPM4-207ENST00000588032 COL4A1P02462 1669 aa12.67□□□□□ -0.38
TPM4-207ENST00000588032 GNAI3P08754 354 aa12.67□□□□□ -0.38
TPM4-207ENST00000588032 CHRNDQ07001 517 aa12.67□□□□□ -0.38
TPM4-207ENST00000588032 FSTL1Q12841 308 aa12.67□□□□□ -0.38
TPM4-207ENST00000588032 CIAPIN1Q6FI81 312 aa12.67□□□□□ -0.38
TPM4-207ENST00000588032 PNMA8AQ86V59 439 aaPredicted RBP12.67□□□□□ -0.38
TPM4-207ENST00000588032 ANKRD44Q8N8A2 993 aa12.67□□□□□ -0.38
TPM4-207ENST00000588032 CNNM1Q9NRU3 951 aa12.67□□□□□ -0.38
TPM4-207ENST00000588032 HACL1Q9UJ83 578 aa12.67□□□□□ -0.38
TPM4-207ENST00000588032 GJA3Q9Y6H8 435 aa12.67□□□□□ -0.38
TPM4-207ENST00000588032 DUOX1Q9NRD9 1551 aa12.67□□□□□ -0.38
TPM4-207ENST00000588032 COL4A5P29400 1685 aa12.67□□□□□ -0.38
TPM4-207ENST00000588032 LMOD1P29536 600 aaPredicted RBP12.66□□□□□ -0.38
TPM4-207ENST00000588032 PODNQ7Z5L7 613 aa12.66□□□□□ -0.38
TPM4-207ENST00000588032 SMC1BQ8NDV3 1235 aa12.66□□□□□ -0.38
TPM4-207ENST00000588032 LTBP1Q14766 1721 aa12.65□□□□□ -0.38
TPM4-207ENST00000588032 ZNF804BA4D1E1 1349 aa12.65□□□□□ -0.38
TPM4-207ENST00000588032 YDJCA8MPS7 323 aa12.65□□□□□ -0.38
TPM4-207ENST00000588032 ECE2O60344 883 aa12.65□□□□□ -0.38
TPM4-207ENST00000588032 NPM3O75607 178 aaKnown RBP12.65□□□□□ -0.38
TPM4-207ENST00000588032 MS4A1P11836 297 aa12.65□□□□□ -0.38
TPM4-207ENST00000588032 KCNJ4P48050 445 aa12.65□□□□□ -0.38
TPM4-207ENST00000588032 DOK7Q18PE1 504 aa12.65□□□□□ -0.38
TPM4-207ENST00000588032 CLUAP1Q96AJ1 413 aa12.65□□□□□ -0.38
TPM4-207ENST00000588032 ZNF594Q96JF6 807 aaPredicted RBP12.65□□□□□ -0.38
TPM4-207ENST00000588032 TAF1DQ9H5J8 278 aaPredicted RBP12.65□□□□□ -0.38
TPM4-207ENST00000588032 DBNDD1Q9H9R9 158 aa12.65□□□□□ -0.38
TPM4-207ENST00000588032 MED23Q9ULK4 1368 aa12.65□□□□□ -0.38
TPM4-207ENST00000588032 MROH5Q6ZUA9 1318 aa12.64□□□□□ -0.39
TPM4-207ENST00000588032 RAD17O75943 681 aa12.64□□□□□ -0.39
TPM4-207ENST00000588032 RPS12P25398 132 aaKnown RBP12.64□□□□□ -0.39
TPM4-207ENST00000588032 EPHX2P34913 555 aa12.64□□□□□ -0.39
TPM4-207ENST00000588032 C15orf52Q6ZUT6 534 aaKnown RBP12.64□□□□□ -0.39
TPM4-207ENST00000588032 FTSJ3Q8IY81 847 aaKnown RBP12.64□□□□□ -0.39
TPM4-207ENST00000588032 DZIP1LQ8IYY4 767 aaKnown RBP12.64□□□□□ -0.39
TPM4-207ENST00000588032 DPF2Q92785 391 aa12.64□□□□□ -0.39
TPM4-207ENST00000588032 GPR101Q96P66 508 aaPredicted RBP12.64□□□□□ -0.39
TPM4-207ENST00000588032 MEIS3Q99687 375 aa12.64□□□□□ -0.39
TPM4-207ENST00000588032 COA1Q9GZY4 146 aa12.64□□□□□ -0.39
TPM4-207ENST00000588032 FBXO3Q9UK99 471 aa12.64□□□□□ -0.39
TPM4-207ENST00000588032 RIPOR2Q9Y4F9 1068 aa12.64□□□□□ -0.39
TPM4-207ENST00000588032 SCN4AP35499 1836 aa12.63□□□□□ -0.39
TPM4-207ENST00000588032 SCNN1DP51172 638 aa12.63□□□□□ -0.39
TPM4-207ENST00000588032 LDHDQ86WU2 507 aa12.63□□□□□ -0.39
TPM4-207ENST00000588032 TMEM57Q8N5G2 664 aa12.63□□□□□ -0.39
TPM4-207ENST00000588032 GPRC5DQ9NZD1 345 aa12.63□□□□□ -0.39
TPM4-207ENST00000588032 RCAN3Q9UKA8 241 aa12.63□□□□□ -0.39
TPM4-207ENST00000588032 LRRFIP2Q9Y608 721 aaKnown RBP12.63□□□□□ -0.39
TPM4-207ENST00000588032 PSMD14O00487 310 aa12.62□□□□□ -0.39
TPM4-207ENST00000588032 TAF5LO75529 589 aa12.62□□□□□ -0.39
TPM4-207ENST00000588032 GNAI2P04899 355 aa12.62□□□□□ -0.39
TPM4-207ENST00000588032 VIL1P09327 827 aaKnown RBP12.62□□□□□ -0.39
TPM4-207ENST00000588032 GMPSP49915 693 aaPredicted RBP12.62□□□□□ -0.39
TPM4-207ENST00000588032 UBE4AQ14139 1066 aa12.62□□□□□ -0.39
TPM4-207ENST00000588032 CHADLQ6NUI6 762 aa12.62□□□□□ -0.39
TPM4-207ENST00000588032 USP50Q70EL3 339 aaPredicted RBP12.62□□□□□ -0.39
TPM4-207ENST00000588032 HELBQ8NG08 1087 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms