RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-208ENST00000588009 TRIM46Q7Z4K8 759 aa8.31□□□□□ -1.08
TUBD1-208ENST00000588009 GLIS3Q8NEA6 775 aa8.31□□□□□ -1.08
TUBD1-208ENST00000588009 PUS7Q96PZ0 661 aaKnown RBP8.31□□□□□ -1.08
TUBD1-208ENST00000588009 COPRSQ9NQ92 184 aa8.31□□□□□ -1.08
TUBD1-208ENST00000588009 CUEDC1Q9NWM3 386 aaPredicted RBP8.31□□□□□ -1.08
TUBD1-208ENST00000588009 BMP1P13497 986 aa8.3□□□□□ -1.08
TUBD1-208ENST00000588009 EDN3P14138 238 aa8.3□□□□□ -1.08
TUBD1-208ENST00000588009 CCINQ13939 588 aa8.3□□□□□ -1.08
TUBD1-208ENST00000588009 EFHC2Q5JST6 749 aa8.3□□□□□ -1.08
TUBD1-208ENST00000588009 IRF7Q92985 503 aa8.3□□□□□ -1.08
TUBD1-208ENST00000588009 SPATA32Q96LK8 384 aa8.3□□□□□ -1.08
TUBD1-208ENST00000588009 GSX2Q9BZM3 304 aa8.3□□□□□ -1.08
TUBD1-208ENST00000588009 EHD4Q9H223 541 aa8.3□□□□□ -1.08
TUBD1-208ENST00000588009 TRAK1Q9UPV9 953 aa8.3□□□□□ -1.08
TUBD1-208ENST00000588009 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.3□□□□□ -1.08
TUBD1-208ENST00000588009 TARSP26639 723 aaKnown RBP8.29□□□□□ -1.08
TUBD1-208ENST00000588009 GJA8P48165 433 aa8.29□□□□□ -1.08
TUBD1-208ENST00000588009 SFSWAPQ12872 951 aaKnown RBP8.29□□□□□ -1.08
TUBD1-208ENST00000588009 C3orf58Q8NDZ4 430 aa8.29□□□□□ -1.08
TUBD1-208ENST00000588009 OR13H1Q8NG92 308 aa8.29□□□□□ -1.08
TUBD1-208ENST00000588009 ZFP42Q96MM3 310 aa8.29□□□□□ -1.08
TUBD1-208ENST00000588009 NOC4LQ9BVI4 516 aaKnown RBP8.29□□□□□ -1.08
TUBD1-208ENST00000588009 LNPKQ9C0E8 428 aa8.29□□□□□ -1.08
TUBD1-208ENST00000588009 LATS2Q9NRM7 1088 aa8.29□□□□□ -1.08
TUBD1-208ENST00000588009 KANSL3Q9P2N6 904 aa8.29□□□□□ -1.08
TUBD1-208ENST00000588009 DNMT3LQ9UJW3 386 aa8.29□□□□□ -1.08
TUBD1-208ENST00000588009 TTF2Q9UNY4 1162 aaKnown RBP8.29□□□□□ -1.08
TUBD1-208ENST00000588009 CADPSQ9ULU8 1353 aa8.28□□□□□ -1.08
TUBD1-208ENST00000588009 ATXN7O15265 892 aaPredicted RBP8.28□□□□□ -1.08
TUBD1-208ENST00000588009 EFSO43281 561 aa8.28□□□□□ -1.08
TUBD1-208ENST00000588009 MMP20O60882 483 aa8.28□□□□□ -1.08
TUBD1-208ENST00000588009 FAM157BP0CG42 384 aa8.28□□□□□ -1.08
TUBD1-208ENST00000588009 CANXP27824 592 aaKnown RBP8.28□□□□□ -1.08
TUBD1-208ENST00000588009 RBL2Q08999 1139 aa8.28□□□□□ -1.08
TUBD1-208ENST00000588009 PAK2Q13177 524 aa8.28□□□□□ -1.08
TUBD1-208ENST00000588009 PEAR1Q5VY43 1037 aaPredicted RBP8.28□□□□□ -1.08
TUBD1-208ENST00000588009 KRT25Q7Z3Z0 450 aa8.28□□□□□ -1.08
TUBD1-208ENST00000588009 RSRP1Q9BUV0 290 aa8.28□□□□□ -1.08
TUBD1-208ENST00000588009 KBTBD4Q9NVX7 518 aa8.28□□□□□ -1.08
TUBD1-208ENST00000588009 SALL4Q9UJQ4 1053 aa8.28□□□□□ -1.08
TUBD1-208ENST00000588009 PHF20L1A8MW92 1017 aa8.27□□□□□ -1.09
TUBD1-208ENST00000588009 ATF4P18848 351 aaPredicted RBP8.27□□□□□ -1.09
TUBD1-208ENST00000588009 FCGRTP55899 365 aa8.27□□□□□ -1.09
TUBD1-208ENST00000588009 LBRQ14739 615 aaKnown RBP8.27□□□□□ -1.09
TUBD1-208ENST00000588009 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.27□□□□□ -1.09
TUBD1-208ENST00000588009 PRPF40BQ6NWY9 871 aaKnown RBP8.27□□□□□ -1.09
TUBD1-208ENST00000588009 FIGNL1Q6PIW4 674 aa8.27□□□□□ -1.09
TUBD1-208ENST00000588009 MCF2L2Q86YR7 1114 aa8.27□□□□□ -1.09
TUBD1-208ENST00000588009 PCDHGC4Q9Y5F7 938 aa8.27□□□□□ -1.09
TUBD1-208ENST00000588009 SENP3-EIF4A1A0A087X0R7 540 aa8.26□□□□□ -1.09
TUBD1-208ENST00000588009 HMGB1P09429 215 aaKnown RBP8.26□□□□□ -1.09
TUBD1-208ENST00000588009 GIMAP6Q6P9H5 292 aa8.26□□□□□ -1.09
TUBD1-208ENST00000588009 GPRASP2Q96D09 838 aa8.26□□□□□ -1.09
TUBD1-208ENST00000588009 ZFATQ9P243 1243 aa8.26□□□□□ -1.09
TUBD1-208ENST00000588009 TMEM238LA0A1B0GVL6 79 aa8.25□□□□□ -1.09
TUBD1-208ENST00000588009 KHNYNO15037 678 aaKnown RBP8.25□□□□□ -1.09
TUBD1-208ENST00000588009 THBS1P07996 1170 aa8.25□□□□□ -1.09
TUBD1-208ENST00000588009 FGRP09769 529 aa8.25□□□□□ -1.09
TUBD1-208ENST00000588009 RARAP10276 462 aa8.25□□□□□ -1.09
TUBD1-208ENST00000588009 XRCC5P13010 732 aaKnown RBP8.25□□□□□ -1.09
TUBD1-208ENST00000588009 TNP2Q05952 138 aa8.25□□□□□ -1.09
TUBD1-208ENST00000588009 PWP1Q13610 501 aa8.25□□□□□ -1.09
TUBD1-208ENST00000588009 RELL1Q8IUW5 271 aa8.25□□□□□ -1.09
TUBD1-208ENST00000588009 ANKRD24Q8TF21 1146 aa8.25□□□□□ -1.09
TUBD1-208ENST00000588009 HIRIP3Q9BW71 556 aaPredicted RBP8.25□□□□□ -1.09
TUBD1-208ENST00000588009 OXCT2Q9BYC2 517 aaPredicted RBP8.25□□□□□ -1.09
TUBD1-208ENST00000588009 LIN7BQ9HAP6 207 aa8.25□□□□□ -1.09
TUBD1-208ENST00000588009 PPM1HQ9ULR3 514 aa8.25□□□□□ -1.09
TUBD1-208ENST00000588009 HSP90B1P14625 803 aaKnown RBP8.24□□□□□ -1.09
TUBD1-208ENST00000588009 MAP3K10Q02779 954 aa8.24□□□□□ -1.09
TUBD1-208ENST00000588009 LAMC2Q13753 1193 aa8.24□□□□□ -1.09
TUBD1-208ENST00000588009 CCDC85BQ15834 202 aaPredicted RBP8.24□□□□□ -1.09
TUBD1-208ENST00000588009 CCDC144BQ3MJ40 725 aa8.24□□□□□ -1.09
TUBD1-208ENST00000588009 SOGA3Q5TF21 947 aa8.24□□□□□ -1.09
TUBD1-208ENST00000588009 RIPOR1Q6ZS17 1223 aa8.24□□□□□ -1.09
TUBD1-208ENST00000588009 NOP9Q86U38 636 aaKnown RBP8.24□□□□□ -1.09
TUBD1-208ENST00000588009 RASGRP4Q8TDF6 673 aa8.24□□□□□ -1.09
TUBD1-208ENST00000588009 TCF12Q99081 682 aa8.24□□□□□ -1.09
TUBD1-208ENST00000588009 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.24□□□□□ -1.09
TUBD1-208ENST00000588009 SPON2Q9BUD6 331 aa8.24□□□□□ -1.09
TUBD1-208ENST00000588009 ABCB6Q9NP58 842 aa8.24□□□□□ -1.09
TUBD1-208ENST00000588009 STRN4Q9NRL3 753 aa8.24□□□□□ -1.09
TUBD1-208ENST00000588009 TLR7Q9NYK1 1049 aaKnown RBP8.24□□□□□ -1.09
TUBD1-208ENST00000588009 AKAP2Q9Y2D5 859 aa8.24□□□□□ -1.09
TUBD1-208ENST00000588009 DCDC2BA2VCK2 349 aa8.23□□□□□ -1.09
TUBD1-208ENST00000588009 H3BM21 787 aa8.23□□□□□ -1.09
TUBD1-208ENST00000588009 STK10O94804 968 aaKnown RBP8.23□□□□□ -1.09
TUBD1-208ENST00000588009 PSAPP07602 524 aa8.23□□□□□ -1.09
TUBD1-208ENST00000588009 MAPTP10636 758 aaKnown RBP8.23□□□□□ -1.09
TUBD1-208ENST00000588009 UBAP2LQ14157 1087 aaKnown RBP8.23□□□□□ -1.09
TUBD1-208ENST00000588009 DTHD1Q6ZMT9 781 aa8.23□□□□□ -1.09
TUBD1-208ENST00000588009 PMFBP1Q8TBY8 1022 aa8.23□□□□□ -1.09
TUBD1-208ENST00000588009 PNMA5Q96PV4 448 aa8.23□□□□□ -1.09
TUBD1-208ENST00000588009 TRIM56Q9BRZ2 755 aaKnown RBP8.23□□□□□ -1.09
TUBD1-208ENST00000588009 ADAMTS1Q9UHI8 967 aa8.23□□□□□ -1.09
TUBD1-208ENST00000588009 MAN1A2O60476 641 aa8.22□□□□□ -1.09
TUBD1-208ENST00000588009 KIF4AO95239 1232 aa8.22□□□□□ -1.09
TUBD1-208ENST00000588009 MAP3K6O95382 1288 aa8.22□□□□□ -1.09
TUBD1-208ENST00000588009 NFKB1P19838 968 aa8.22□□□□□ -1.09
TUBD1-208ENST00000588009 GBP2P32456 591 aaPredicted RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms