RNA–Protein interactions for RNA: ENST00000587235.5

TCF3-210, Transcript of transcription factor 3, human

TSL 5

Gene TCF3, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF3-210	ENST00000587235	ZC3H12C	Q9C0D7	883 aa	Known RBP	32.37	■■■□□ 2.77
TCF3-210	ENST00000587235	SHTN1	A0MZ66	631 aa		32.36	■■■□□ 2.77
TCF3-210	ENST00000587235		H7C1D1	291 aa		32.36	■■■□□ 2.77
TCF3-210	ENST00000587235	ECE2	O60344	883 aa		32.36	■■■□□ 2.77
TCF3-210	ENST00000587235	ANKRD18A	Q8IVF6	992 aa		32.36	■■■□□ 2.77
TCF3-210	ENST00000587235	KCNQ5	Q9NR82	932 aa		32.36	■■■□□ 2.77
TCF3-210	ENST00000587235	PGAP2	Q9UHJ9	254 aa		32.36	■■■□□ 2.77
TCF3-210	ENST00000587235	NEURL1B	A8MQ27	555 aa		32.35	■■■□□ 2.77
TCF3-210	ENST00000587235	CTSW	P56202	376 aa		32.35	■■■□□ 2.77
TCF3-210	ENST00000587235	TRPM4	Q8TD43	1214 aa		32.35	■■■□□ 2.77
TCF3-210	ENST00000587235	DPF2	Q92785	391 aa		32.35	■■■□□ 2.77
TCF3-210	ENST00000587235	GGA1	Q9UJY5	639 aa		32.35	■■■□□ 2.77
TCF3-210	ENST00000587235	UFL1	O94874	794 aa		32.34	■■■□□ 2.77
TCF3-210	ENST00000587235	CST9	Q5W186	159 aa		32.34	■■■□□ 2.77
TCF3-210	ENST00000587235	MICALL2	Q8IY33	904 aa		32.34	■■■□□ 2.77
TCF3-210	ENST00000587235	ZC3H15	Q8WU90	426 aa	Known RBP	32.34	■■■□□ 2.77
TCF3-210	ENST00000587235	VAMP4	O75379	141 aa		32.33	■■■□□ 2.77
TCF3-210	ENST00000587235	FLII	Q13045	1269 aa		32.33	■■■□□ 2.77
TCF3-210	ENST00000587235	TTLL11	Q8NHH1	800 aa		32.33	■■■□□ 2.77
TCF3-210	ENST00000587235	GLIS2	Q9BZE0	524 aa	Predicted RBP	32.32	■■■□□ 2.76
TCF3-210	ENST00000587235		G3V3G9	751 aa		32.31	■■■□□ 2.76
TCF3-210	ENST00000587235		H7C1W4	665 aa		32.31	■■■□□ 2.76
TCF3-210	ENST00000587235	EXOSC9	Q06265	439 aa	Known RBP	32.31	■■■□□ 2.76
TCF3-210	ENST00000587235	DCAF8	Q5TAQ9	597 aa		32.31	■■■□□ 2.76
TCF3-210	ENST00000587235	CDC5L	Q99459	802 aa	Known RBP	32.31	■■■□□ 2.76
TCF3-210	ENST00000587235	FKBP5	Q13451	457 aa	Predicted RBP	32.3	■■■□□ 2.76
TCF3-210	ENST00000587235	UBE3B	Q7Z3V4	1068 aa		32.3	■■■□□ 2.76
TCF3-210	ENST00000587235	TNS4	Q8IZW8	715 aa		32.3	■■■□□ 2.76
TCF3-210	ENST00000587235	MYH16	Q9H6N6	1097 aa		32.3	■■■□□ 2.76
TCF3-210	ENST00000587235	RTL9	Q8NET4	1388 aa		32.3	■■■□□ 2.76
TCF3-210	ENST00000587235	WDR33	Q9C0J8	1336 aa	Known RBP	32.29	■■■□□ 2.76
TCF3-210	ENST00000587235	CCER2	I3L3R5	266 aa		32.29	■■■□□ 2.76
TCF3-210	ENST00000587235	FOXN1	O15353	648 aa		32.29	■■■□□ 2.76
TCF3-210	ENST00000587235	RPS12	P25398	132 aa	Known RBP	32.29	■■■□□ 2.76
TCF3-210	ENST00000587235	SAMD7	Q7Z3H4	446 aa		32.29	■■■□□ 2.76
TCF3-210	ENST00000587235	GREM2	Q9H772	168 aa		32.29	■■■□□ 2.76
TCF3-210	ENST00000587235	XDH	P47989	1333 aa		32.28	■■■□□ 2.76
TCF3-210	ENST00000587235	DNAAF4	Q8WXU2	420 aa		32.28	■■■□□ 2.76
TCF3-210	ENST00000587235	SPINK5	Q9NQ38	1064 aa	Predicted RBP	32.28	■■■□□ 2.76
TCF3-210	ENST00000587235	TRPM7	Q96QT4	1865 aa		32.27	■■■□□ 2.76
TCF3-210	ENST00000587235	GCKR	Q14397	625 aa		32.27	■■■□□ 2.76
TCF3-210	ENST00000587235	CDC37L1	Q7L3B6	337 aa		32.27	■■■□□ 2.76
TCF3-210	ENST00000587235	WBP1L	Q9NX94	342 aa		32.27	■■■□□ 2.76
TCF3-210	ENST00000587235	CELF2	O95319	508 aa	Known RBP	32.26	■■■□□ 2.75
TCF3-210	ENST00000587235	VIL1	P09327	827 aa	Known RBP	32.26	■■■□□ 2.75
TCF3-210	ENST00000587235	ATP2B4	P23634	1241 aa		32.26	■■■□□ 2.75
TCF3-210	ENST00000587235	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	32.26	■■■□□ 2.75
TCF3-210	ENST00000587235	AIDA	Q96BJ3	306 aa		32.26	■■■□□ 2.75
TCF3-210	ENST00000587235	BSDC1	Q9NW68	430 aa	Predicted RBP	32.26	■■■□□ 2.75
TCF3-210	ENST00000587235	TLL2	Q9Y6L7	1015 aa		32.26	■■■□□ 2.75
TCF3-210	ENST00000587235	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	32.25	■■■□□ 2.75
TCF3-210	ENST00000587235	MINPP1	Q9UNW1	487 aa		32.25	■■■□□ 2.75
TCF3-210	ENST00000587235	RBM26	Q5T8P6	1007 aa	Known RBP	32.24	■■■□□ 2.75
TCF3-210	ENST00000587235	LINS1	Q8NG48	757 aa		32.24	■■■□□ 2.75
TCF3-210	ENST00000587235	USP48	Q86UV5	1035 aa		32.23	■■■□□ 2.75
TCF3-210	ENST00000587235	CAPNS2	Q96L46	248 aa		32.23	■■■□□ 2.75
TCF3-210	ENST00000587235	PLA2G12B	Q9BX93	195 aa		32.23	■■■□□ 2.75
TCF3-210	ENST00000587235	CACNA1F	O60840	1977 aa		32.22	■■■□□ 2.75
TCF3-210	ENST00000587235	WTIP	A6NIX2	430 aa	Predicted RBP	32.22	■■■□□ 2.75
TCF3-210	ENST00000587235	EGFR	P00533	1210 aa		32.22	■■■□□ 2.75
TCF3-210	ENST00000587235	ECE1	P42892	770 aa		32.22	■■■□□ 2.75
TCF3-210	ENST00000587235	CYP4F22	Q6NT55	531 aa		32.22	■■■□□ 2.75
TCF3-210	ENST00000587235	ZNF408	Q9H9D4	720 aa		32.22	■■■□□ 2.75
TCF3-210	ENST00000587235	ZNF521	Q96K83	1311 aa		32.22	■■■□□ 2.75
TCF3-210	ENST00000587235	SCN9A	Q15858	1988 aa		32.21	■■■□□ 2.75
TCF3-210	ENST00000587235	CTCF	P49711	727 aa	Predicted RBP	32.21	■■■□□ 2.75
TCF3-210	ENST00000587235	CASP7	P55210	303 aa		32.21	■■■□□ 2.75
TCF3-210	ENST00000587235	GRM1	Q13255	1194 aa		32.21	■■■□□ 2.75
TCF3-210	ENST00000587235	MYH3	P11055	1940 aa		32.21	■■■□□ 2.75
TCF3-210	ENST00000587235	MAP2K1	Q02750	393 aa	Predicted RBP	32.2	■■■□□ 2.75
TCF3-210	ENST00000587235	SAPCD2	Q86UD0	394 aa		32.2	■■■□□ 2.75
TCF3-210	ENST00000587235	IGHMBP2	P38935	993 aa	Known RBP	32.19	■■■□□ 2.74
TCF3-210	ENST00000587235		F6X3S4	739 aa		32.18	■■■□□ 2.74
TCF3-210	ENST00000587235	CSF1R	P07333	972 aa		32.18	■■■□□ 2.74
TCF3-210	ENST00000587235	ITGA6	P23229	1130 aa		32.18	■■■□□ 2.74
TCF3-210	ENST00000587235	RSBN1L	Q6PCB5	846 aa	Predicted RBP	32.18	■■■□□ 2.74
TCF3-210	ENST00000587235	PRDM10	Q9NQV6	1147 aa		32.18	■■■□□ 2.74
TCF3-210	ENST00000587235	CCT4	P50991	539 aa	Known RBP	32.17	■■■□□ 2.74
TCF3-210	ENST00000587235	DLK2	Q6UY11	383 aa		32.17	■■■□□ 2.74
TCF3-210	ENST00000587235	PODN	Q7Z5L7	613 aa		32.17	■■■□□ 2.74
TCF3-210	ENST00000587235	KIF4B	Q2VIQ3	1234 aa		32.16	■■■□□ 2.74
TCF3-210	ENST00000587235	FAM161A	Q3B820	660 aa		32.16	■■■□□ 2.74
TCF3-210	ENST00000587235	KRT26	Q7Z3Y9	468 aa		32.16	■■■□□ 2.74
TCF3-210	ENST00000587235	AGBL3	Q8NEM8	1001 aa		32.16	■■■□□ 2.74
TCF3-210	ENST00000587235	DCPS	Q96C86	337 aa	Known RBP	32.16	■■■□□ 2.74
TCF3-210	ENST00000587235	POLR2A	P24928	1970 aa	Known RBP	32.14	■■■□□ 2.74
TCF3-210	ENST00000587235	USP17L3	A6NCW0	530 aa		32.14	■■■□□ 2.74
TCF3-210	ENST00000587235	USP17L4	A6NCW7	530 aa		32.14	■■■□□ 2.74
TCF3-210	ENST00000587235	CAPN15	O75808	1086 aa		32.14	■■■□□ 2.74
TCF3-210	ENST00000587235	LBX1	P52954	281 aa		32.14	■■■□□ 2.74
TCF3-210	ENST00000587235	BEND3	Q5T5X7	828 aa		32.14	■■■□□ 2.74
TCF3-210	ENST00000587235	USP17L1	Q7RTZ2	530 aa		32.14	■■■□□ 2.74
TCF3-210	ENST00000587235	ZNF280A	P59817	542 aa	Predicted RBP	32.13	■■■□□ 2.73
TCF3-210	ENST00000587235	HHIPL1	Q96JK4	782 aa		32.13	■■■□□ 2.73
TCF3-210	ENST00000587235	MPHOSPH8	Q99549	860 aa		32.13	■■■□□ 2.73
TCF3-210	ENST00000587235	MED23	Q9ULK4	1368 aa		32.13	■■■□□ 2.73
TCF3-210	ENST00000587235	LEMD3	Q9Y2U8	911 aa		32.13	■■■□□ 2.73
TCF3-210	ENST00000587235	SPEF2	Q9C093	1822 aa		32.12	■■■□□ 2.73
TCF3-210	ENST00000587235		E9PSI1	815 aa		32.12	■■■□□ 2.73
TCF3-210	ENST00000587235	AOC2	O75106	756 aa		32.12	■■■□□ 2.73

Retrieved 100 of 20,778 RNA–protein pairs in 25 ms