RNA–Protein interactions for RNA: ENST00000586117.5

RANBP3-205, Transcript of RAN binding protein 3, human

TSL 4

Gene RANBP3, Length 524 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RANBP3-205	ENST00000586117	VIL1	P09327	827 aa	Known RBP	13.96	□□□□□ -0.17
RANBP3-205	ENST00000586117	TMEM106C	Q9BVX2	250 aa		13.96	□□□□□ -0.17
RANBP3-205	ENST00000586117	HTATSF1	O43719	755 aa	Known RBP	13.95	□□□□□ -0.18
RANBP3-205	ENST00000586117	ZNF280A	P59817	542 aa	Predicted RBP	13.95	□□□□□ -0.18
RANBP3-205	ENST00000586117	TCIRG1	Q13488	830 aa		13.95	□□□□□ -0.18
RANBP3-205	ENST00000586117	ARMC5	Q96C12	935 aa		13.95	□□□□□ -0.18
RANBP3-205	ENST00000586117	OTUD5	Q96G74	571 aa		13.95	□□□□□ -0.18
RANBP3-205	ENST00000586117	POLL	Q9UGP5	575 aa		13.95	□□□□□ -0.18
RANBP3-205	ENST00000586117	TIMELESS	Q9UNS1	1208 aa		13.95	□□□□□ -0.18
RANBP3-205	ENST00000586117	PTPN22	Q9Y2R2	807 aa		13.95	□□□□□ -0.18
RANBP3-205	ENST00000586117	BRCA2	P51587	3418 aa		13.95	□□□□□ -0.18
RANBP3-205	ENST00000586117	CEP290	O15078	2479 aa		13.94	□□□□□ -0.18
RANBP3-205	ENST00000586117	NF2	P35240	595 aa		13.94	□□□□□ -0.18
RANBP3-205	ENST00000586117	SCN9A	Q15858	1988 aa		13.93	□□□□□ -0.18
RANBP3-205	ENST00000586117		G3V3G9	751 aa		13.93	□□□□□ -0.18
RANBP3-205	ENST00000586117		H0YGN5	161 aa		13.93	□□□□□ -0.18
RANBP3-205	ENST00000586117	DCAF8	Q5TAQ9	597 aa		13.93	□□□□□ -0.18
RANBP3-205	ENST00000586117	PRAMEF18	Q5VWM3	479 aa		13.93	□□□□□ -0.18
RANBP3-205	ENST00000586117	AGBL3	Q8NEM8	1001 aa		13.93	□□□□□ -0.18
RANBP3-205	ENST00000586117	PNISR	Q8TF01	805 aa	Known RBP	13.93	□□□□□ -0.18
RANBP3-205	ENST00000586117	NECTIN2	Q92692	538 aa		13.93	□□□□□ -0.18
RANBP3-205	ENST00000586117	ERO1A	Q96HE7	468 aa		13.93	□□□□□ -0.18
RANBP3-205	ENST00000586117	MYOZ2	Q9NPC6	264 aa		13.93	□□□□□ -0.18
RANBP3-205	ENST00000586117	SCAF8	Q9UPN6	1271 aa	Known RBP	13.93	□□□□□ -0.18
RANBP3-205	ENST00000586117	CENPF	P49454	3210 aa		13.92	□□□□□ -0.18
RANBP3-205	ENST00000586117	ERBB4	Q15303	1308 aa		13.92	□□□□□ -0.18
RANBP3-205	ENST00000586117	SH3TC1	Q8TE82	1336 aa		13.92	□□□□□ -0.18
RANBP3-205	ENST00000586117	EIF4A1	P60842	406 aa	Known RBP	13.92	□□□□□ -0.18
RANBP3-205	ENST00000586117	GPSM2	P81274	684 aa		13.92	□□□□□ -0.18
RANBP3-205	ENST00000586117	HSP90AB3P	Q58FF7	597 aa		13.92	□□□□□ -0.18
RANBP3-205	ENST00000586117	RSBN1L	Q6PCB5	846 aa	Predicted RBP	13.92	□□□□□ -0.18
RANBP3-205	ENST00000586117	CHRDL2	Q6WN34	429 aa		13.92	□□□□□ -0.18
RANBP3-205	ENST00000586117	ZC3H12C	Q9C0D7	883 aa	Known RBP	13.92	□□□□□ -0.18
RANBP3-205	ENST00000586117	TRMT112	Q9UI30	125 aa	Known RBP	13.92	□□□□□ -0.18
RANBP3-205	ENST00000586117	HTT	P42858	3142 aa		13.92	□□□□□ -0.18
RANBP3-205	ENST00000586117	ZNF609	O15014	1411 aa		13.91	□□□□□ -0.18
RANBP3-205	ENST00000586117	USP17L8	P0C7I0	530 aa		13.91	□□□□□ -0.18
RANBP3-205	ENST00000586117	ARMC9	Q7Z3E5	817 aa		13.91	□□□□□ -0.18
RANBP3-205	ENST00000586117	NLRP10	Q86W26	655 aa		13.91	□□□□□ -0.18
RANBP3-205	ENST00000586117	TBC1D16	Q8TBP0	767 aa		13.91	□□□□□ -0.18
RANBP3-205	ENST00000586117	CELF1	Q92879	486 aa	Known RBP	13.91	□□□□□ -0.18
RANBP3-205	ENST00000586117	KDM3B	Q7LBC6	1761 aa		13.91	□□□□□ -0.18
RANBP3-205	ENST00000586117	MANSC4	A6NHS7	340 aa	Predicted RBP	13.9	□□□□□ -0.18
RANBP3-205	ENST00000586117	INHBE	P58166	350 aa		13.9	□□□□□ -0.18
RANBP3-205	ENST00000586117	PTPN12	Q05209	780 aa	Known RBP	13.9	□□□□□ -0.18
RANBP3-205	ENST00000586117	SPRYD7	Q5W111	196 aa		13.9	□□□□□ -0.18
RANBP3-205	ENST00000586117	IFNL1	Q8IU54	200 aa		13.9	□□□□□ -0.18
RANBP3-205	ENST00000586117	CCER1	Q8TC90	406 aa	Predicted RBP	13.9	□□□□□ -0.18
RANBP3-205	ENST00000586117	CD99L2	Q8TCZ2	262 aa		13.9	□□□□□ -0.18
RANBP3-205	ENST00000586117	THUMPD2	Q9BTF0	503 aa	Known RBP	13.9	□□□□□ -0.18
RANBP3-205	ENST00000586117	EFCC1	Q9HA90	598 aa		13.9	□□□□□ -0.18
RANBP3-205	ENST00000586117	NUDC	Q9Y266	331 aa		13.9	□□□□□ -0.18
RANBP3-205	ENST00000586117	PER1	O15534	1290 aa	Predicted RBP	13.89	□□□□□ -0.19
RANBP3-205	ENST00000586117	U2AF1L5	P0DN76	240 aa	Predicted RBP	13.89	□□□□□ -0.19
RANBP3-205	ENST00000586117	U2AF1	Q01081	240 aa	Known RBP eCLIP	13.89	□□□□□ -0.19
RANBP3-205	ENST00000586117	CNGB1	Q14028	1251 aa	Predicted RBP	13.89	□□□□□ -0.19
RANBP3-205	ENST00000586117	ZNF333	Q96JL9	665 aa		13.89	□□□□□ -0.19
RANBP3-205	ENST00000586117	CFAP53	Q96M91	514 aa		13.89	□□□□□ -0.19
RANBP3-205	ENST00000586117	RBM27	Q9P2N5	1060 aa	Known RBP	13.89	□□□□□ -0.19
RANBP3-205	ENST00000586117	PRKG1	Q13976	671 aa		13.88	□□□□□ -0.19
RANBP3-205	ENST00000586117	SLC4A8	Q2Y0W8	1093 aa		13.88	□□□□□ -0.19
RANBP3-205	ENST00000586117	NBPF11	Q86T75	865 aa		13.88	□□□□□ -0.19
RANBP3-205	ENST00000586117	CUL9	Q8IWT3	2517 aa		13.88	□□□□□ -0.19
RANBP3-205	ENST00000586117	MNX1	P50219	401 aa	Predicted RBP	13.87	□□□□□ -0.19
RANBP3-205	ENST00000586117	NBPF9	Q3BBW0	867 aa		13.87	□□□□□ -0.19
RANBP3-205	ENST00000586117	LRP10	Q7Z4F1	713 aa		13.87	□□□□□ -0.19
RANBP3-205	ENST00000586117	GML	Q99445	158 aa		13.87	□□□□□ -0.19
RANBP3-205	ENST00000586117	PSME4	Q14997	1843 aa		13.86	□□□□□ -0.19
RANBP3-205	ENST00000586117	IGF2BP3	O00425	579 aa	Known RBP eCLIP	13.86	□□□□□ -0.19
RANBP3-205	ENST00000586117	UFL1	O94874	794 aa		13.86	□□□□□ -0.19
RANBP3-205	ENST00000586117	PDIA6	Q15084	440 aa		13.86	□□□□□ -0.19
RANBP3-205	ENST00000586117	SF3B3	Q15393	1217 aa	Known RBP	13.86	□□□□□ -0.19
RANBP3-205	ENST00000586117	SLC9C1	Q4G0N8	1177 aa		13.86	□□□□□ -0.19
RANBP3-205	ENST00000586117	LDLRAD1	Q5T700	205 aa		13.86	□□□□□ -0.19
RANBP3-205	ENST00000586117	ANGEL1	Q9UNK9	670 aa	Known RBP	13.86	□□□□□ -0.19
RANBP3-205	ENST00000586117	ANXA1	P04083	346 aa		13.85	□□□□□ -0.19
RANBP3-205	ENST00000586117	ZBTB48	P10074	688 aa	Predicted RBP	13.85	□□□□□ -0.19
RANBP3-205	ENST00000586117	EIF2S2	P20042	333 aa	Known RBP	13.85	□□□□□ -0.19
RANBP3-205	ENST00000586117	SP3	Q02447	781 aa		13.85	□□□□□ -0.19
RANBP3-205	ENST00000586117	OTUD7B	Q6GQQ9	843 aa		13.85	□□□□□ -0.19
RANBP3-205	ENST00000586117	SLC10A4	Q96EP9	437 aa		13.85	□□□□□ -0.19
RANBP3-205	ENST00000586117	PODXL2	Q9NZ53	605 aa		13.85	□□□□□ -0.19
RANBP3-205	ENST00000586117	ANKIB1	Q9P2G1	1089 aa		13.85	□□□□□ -0.19
RANBP3-205	ENST00000586117	GGA1	Q9UJY5	639 aa		13.85	□□□□□ -0.19
RANBP3-205	ENST00000586117	CLSPN	Q9HAW4	1339 aa		13.85	□□□□□ -0.19
RANBP3-205	ENST00000586117	USP17L3	A6NCW0	530 aa		13.84	□□□□□ -0.19
RANBP3-205	ENST00000586117	USP17L4	A6NCW7	530 aa		13.84	□□□□□ -0.19
RANBP3-205	ENST00000586117	RPS8	P62241	208 aa	Known RBP	13.84	□□□□□ -0.19
RANBP3-205	ENST00000586117	AIMP1	Q12904	312 aa	Known RBP	13.84	□□□□□ -0.19
RANBP3-205	ENST00000586117	CRHR2	Q13324	411 aa		13.84	□□□□□ -0.19
RANBP3-205	ENST00000586117	PROSER3	Q2NL68	480 aa		13.84	□□□□□ -0.19
RANBP3-205	ENST00000586117	COPS6	Q7L5N1	327 aa		13.84	□□□□□ -0.19
RANBP3-205	ENST00000586117	USP17L1	Q7RTZ2	530 aa		13.84	□□□□□ -0.19
RANBP3-205	ENST00000586117	OGFOD1	Q8N543	542 aa		13.84	□□□□□ -0.19
RANBP3-205	ENST00000586117	DPF3	Q92784	378 aa		13.84	□□□□□ -0.19
RANBP3-205	ENST00000586117	ZNF428	Q96B54	188 aa		13.84	□□□□□ -0.19
RANBP3-205	ENST00000586117	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	13.84	□□□□□ -0.19
RANBP3-205	ENST00000586117	WNT10B	O00744	389 aa		13.83	□□□□□ -0.2
RANBP3-205	ENST00000586117	ARHGEF6	Q15052	776 aa		13.83	□□□□□ -0.2
RANBP3-205	ENST00000586117	WNK4	Q96J92	1243 aa		13.83	□□□□□ -0.2

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