RNA–Protein interactions for RNA: ENST00000585931.5

LDLRAD4-205, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD4, Length 2,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-205ENST00000585931 VGLL2Q8N8G2 317 aa18.24■□□□□ 0.51
LDLRAD4-205ENST00000585931 SEC31BQ9NQW1 1179 aa18.24■□□□□ 0.51
LDLRAD4-205ENST00000585931 NARFQ9UHQ1 456 aa18.24■□□□□ 0.51
LDLRAD4-205ENST00000585931 GOLIM4O00461 696 aa18.23■□□□□ 0.51
LDLRAD4-205ENST00000585931 IFIT1P09914 478 aaKnown RBP18.23■□□□□ 0.51
LDLRAD4-205ENST00000585931 TBC1D9BQ66K14 1250 aa18.23■□□□□ 0.51
LDLRAD4-205ENST00000585931 PAG1Q9NWQ8 432 aa18.23■□□□□ 0.51
LDLRAD4-205ENST00000585931 SRP68Q9UHB9 627 aaKnown RBP18.23■□□□□ 0.51
LDLRAD4-205ENST00000585931 SNX14Q9Y5W7 946 aa18.23■□□□□ 0.51
LDLRAD4-205ENST00000585931 BICDL1Q6ZP65 573 aa18.23■□□□□ 0.51
LDLRAD4-205ENST00000585931 ZNF589Q86UQ0 364 aaPredicted RBP18.23■□□□□ 0.51
LDLRAD4-205ENST00000585931 KBTBD3Q8NAB2 608 aa18.23■□□□□ 0.51
LDLRAD4-205ENST00000585931 CCDC171Q6TFL3 1326 aa18.23■□□□□ 0.51
LDLRAD4-205ENST00000585931 TAF1LQ8IZX4 1826 aa18.23■□□□□ 0.51
LDLRAD4-205ENST00000585931 FRAT2O75474 233 aaPredicted RBP18.22■□□□□ 0.51
LDLRAD4-205ENST00000585931 HSP90AA1P07900 732 aaKnown RBP18.22■□□□□ 0.51
LDLRAD4-205ENST00000585931 ATP2B3Q16720 1220 aa18.22■□□□□ 0.51
LDLRAD4-205ENST00000585931 CCDC158Q5M9N0 1113 aa18.22■□□□□ 0.51
LDLRAD4-205ENST00000585931 LRRC4BQ9NT99 713 aa18.22■□□□□ 0.51
LDLRAD4-205ENST00000585931 CHMP5Q9NZZ3 219 aa18.22■□□□□ 0.51
LDLRAD4-205ENST00000585931 RTCBQ9Y3I0 505 aaKnown RBP18.22■□□□□ 0.51
LDLRAD4-205ENST00000585931 PDE8BO95263 885 aa18.22■□□□□ 0.51
LDLRAD4-205ENST00000585931 ERFEQ4G0M1 354 aa18.22■□□□□ 0.51
LDLRAD4-205ENST00000585931 GORABQ5T7V8 394 aa18.22■□□□□ 0.51
LDLRAD4-205ENST00000585931 MAP4K1Q92918 833 aa18.22■□□□□ 0.51
LDLRAD4-205ENST00000585931 UPF3BQ9BZI7 483 aaKnown RBP18.22■□□□□ 0.51
LDLRAD4-205ENST00000585931 MED23Q9ULK4 1368 aa18.22■□□□□ 0.51
LDLRAD4-205ENST00000585931 CCDC152Q4G0S7 254 aa18.21■□□□□ 0.51
LDLRAD4-205ENST00000585931 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.21■□□□□ 0.51
LDLRAD4-205ENST00000585931 ARHGEF1Q92888 912 aaKnown RBP18.21■□□□□ 0.51
LDLRAD4-205ENST00000585931 RGL2O15211 777 aa18.2■□□□□ 0.5
LDLRAD4-205ENST00000585931 ZPR1O75312 459 aa18.2■□□□□ 0.5
LDLRAD4-205ENST00000585931 NECTIN1Q15223 517 aa18.2■□□□□ 0.5
LDLRAD4-205ENST00000585931 TTC39AQ5SRH9 613 aa18.2■□□□□ 0.5
LDLRAD4-205ENST00000585931 KRT27Q7Z3Y8 459 aa18.2■□□□□ 0.5
LDLRAD4-205ENST00000585931 FAM43AQ8N2R8 423 aa18.2■□□□□ 0.5
LDLRAD4-205ENST00000585931 SEC62Q99442 399 aaKnown RBP18.2■□□□□ 0.5
LDLRAD4-205ENST00000585931 RFX7Q2KHR2 1363 aa18.2■□□□□ 0.5
LDLRAD4-205ENST00000585931 HSP90B1P14625 803 aaKnown RBP18.2■□□□□ 0.5
LDLRAD4-205ENST00000585931 SCARF1Q14162 830 aa18.2■□□□□ 0.5
LDLRAD4-205ENST00000585931 SLFNL1Q499Z3 407 aa18.2■□□□□ 0.5
LDLRAD4-205ENST00000585931 PRPF40BQ6NWY9 871 aaKnown RBP18.2■□□□□ 0.5
LDLRAD4-205ENST00000585931 HELBQ8NG08 1087 aaPredicted RBP18.2■□□□□ 0.5
LDLRAD4-205ENST00000585931 BRWD3Q6RI45 1802 aa18.2■□□□□ 0.5
LDLRAD4-205ENST00000585931 FKBP4Q02790 459 aaKnown RBP eCLIP18.19■□□□□ 0.5
LDLRAD4-205ENST00000585931 FAM196AQ6ZSG2 479 aa18.19■□□□□ 0.5
LDLRAD4-205ENST00000585931 C3orf67Q6ZVT6 689 aa18.19■□□□□ 0.5
LDLRAD4-205ENST00000585931 RBM8AQ9Y5S9 174 aaKnown RBP18.19■□□□□ 0.5
LDLRAD4-205ENST00000585931 SCN7AQ01118 1682 aa18.19■□□□□ 0.5
LDLRAD4-205ENST00000585931 KCNB2Q92953 911 aa18.19■□□□□ 0.5
LDLRAD4-205ENST00000585931 MPHOSPH8Q99549 860 aa18.19■□□□□ 0.5
LDLRAD4-205ENST00000585931 LRP5O75197 1615 aa18.18■□□□□ 0.5
LDLRAD4-205ENST00000585931 MROH5Q6ZUA9 1318 aa18.18■□□□□ 0.5
LDLRAD4-205ENST00000585931 TAF5LO75529 589 aa18.18■□□□□ 0.5
LDLRAD4-205ENST00000585931 LAMB2P55268 1798 aa18.18■□□□□ 0.5
LDLRAD4-205ENST00000585931 C4BP0C0L5 1744 aa18.18■□□□□ 0.5
LDLRAD4-205ENST00000585931 RTL9Q8NET4 1388 aa18.18■□□□□ 0.5
LDLRAD4-205ENST00000585931 PHF14O94880 888 aa18.17■□□□□ 0.5
LDLRAD4-205ENST00000585931 MCMDC2Q4G0Z9 681 aa18.17■□□□□ 0.5
LDLRAD4-205ENST00000585931 CCDC129Q6ZRS4 1044 aa18.17■□□□□ 0.5
LDLRAD4-205ENST00000585931 SETDB2Q96T68 719 aa18.17■□□□□ 0.5
LDLRAD4-205ENST00000585931 SNAP23O00161 211 aa18.17■□□□□ 0.5
LDLRAD4-205ENST00000585931 RRP9O43818 475 aaKnown RBP18.17■□□□□ 0.5
LDLRAD4-205ENST00000585931 TRIM37O94972 964 aa18.17■□□□□ 0.5
LDLRAD4-205ENST00000585931 FGFR2P21802 821 aa18.17■□□□□ 0.5
LDLRAD4-205ENST00000585931 ADCK5Q3MIX3 580 aa18.17■□□□□ 0.5
LDLRAD4-205ENST00000585931 TRAPPC3LQ5T215 181 aa18.17■□□□□ 0.5
LDLRAD4-205ENST00000585931 PI16Q6UXB8 463 aa18.17■□□□□ 0.5
LDLRAD4-205ENST00000585931 CREB3L3Q68CJ9 461 aa18.16■□□□□ 0.5
LDLRAD4-205ENST00000585931 TMX3Q96JJ7 454 aa18.16■□□□□ 0.5
LDLRAD4-205ENST00000585931 COL4A1P02462 1669 aa18.16■□□□□ 0.5
LDLRAD4-205ENST00000585931 GTF2E1P29083 439 aaPredicted RBP18.16■□□□□ 0.5
LDLRAD4-205ENST00000585931 IGHMBP2P38935 993 aaKnown RBP18.16■□□□□ 0.5
LDLRAD4-205ENST00000585931 MCAMP43121 646 aa18.16■□□□□ 0.5
LDLRAD4-205ENST00000585931 ZAP70P43403 619 aa18.16■□□□□ 0.5
LDLRAD4-205ENST00000585931 KCNJ4P48050 445 aa18.16■□□□□ 0.5
LDLRAD4-205ENST00000585931 MCM2P49736 904 aa18.16■□□□□ 0.5
LDLRAD4-205ENST00000585931 SF3B3Q15393 1217 aaKnown RBP18.16■□□□□ 0.5
LDLRAD4-205ENST00000585931 PUM3Q15397 648 aaKnown RBP18.16■□□□□ 0.5
LDLRAD4-205ENST00000585931 SLC10A5Q5PT55 438 aa18.16■□□□□ 0.5
LDLRAD4-205ENST00000585931 A0A0U1RQG5 324 aaPredicted RBP18.15■□□□□ 0.5
LDLRAD4-205ENST00000585931 RFC4P35249 363 aa18.15■□□□□ 0.5
LDLRAD4-205ENST00000585931 NOL8Q76FK4 1167 aaKnown RBP18.15■□□□□ 0.5
LDLRAD4-205ENST00000585931 LPIN2Q92539 896 aa18.15■□□□□ 0.5
LDLRAD4-205ENST00000585931 CIZ1Q9ULV3 898 aaPredicted RBP18.15■□□□□ 0.5
LDLRAD4-205ENST00000585931 ABCC12Q96J65 1359 aa18.15■□□□□ 0.5
LDLRAD4-205ENST00000585931 SPEF2Q9C093 1822 aa18.15■□□□□ 0.5
LDLRAD4-205ENST00000585931 AKAP11Q9UKA4 1901 aa18.15■□□□□ 0.5
LDLRAD4-205ENST00000585931 SLC27A2O14975 620 aa18.14■□□□□ 0.5
LDLRAD4-205ENST00000585931 CPA1P15085 419 aa18.14■□□□□ 0.5
LDLRAD4-205ENST00000585931 TICAM2Q86XR7 235 aa18.14■□□□□ 0.5
LDLRAD4-205ENST00000585931 TTC14Q96N46 770 aa18.14■□□□□ 0.5
LDLRAD4-205ENST00000585931 RNF113AO15541 343 aaKnown RBP18.14■□□□□ 0.49
LDLRAD4-205ENST00000585931 CASTP20810 708 aaKnown RBP18.14■□□□□ 0.49
LDLRAD4-205ENST00000585931 GSE1Q14687 1217 aa18.14■□□□□ 0.49
LDLRAD4-205ENST00000585931 ZMYM1Q5SVZ6 1142 aa18.14■□□□□ 0.49
LDLRAD4-205ENST00000585931 CCDC102BQ68D86 513 aa18.14■□□□□ 0.49
LDLRAD4-205ENST00000585931 NBPF5PQ86XG9 351 aaPredicted RBP18.14■□□□□ 0.49
LDLRAD4-205ENST00000585931 ZGPATQ8N5A5 531 aaKnown RBP18.14■□□□□ 0.49
LDLRAD4-205ENST00000585931 ZNF512BQ96KM6 892 aaPredicted RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms