RNA–Protein interactions for RNA: ENST00000585594.5

NEDD4L-212, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4L, Length 220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-212ENST00000585594 APPL2Q8NEU8 664 aa2.04□□□□□ -2.08
NEDD4L-212ENST00000585594 GAS2L2Q8NHY3 880 aa2.04□□□□□ -2.08
NEDD4L-212ENST00000585594 WDR66Q8TBY9 1149 aa2.04□□□□□ -2.08
NEDD4L-212ENST00000585594 NEK9Q8TD19 979 aa2.04□□□□□ -2.08
NEDD4L-212ENST00000585594 USP6NLQ92738 828 aa2.04□□□□□ -2.08
NEDD4L-212ENST00000585594 TBC1D20Q96BZ9 403 aa2.04□□□□□ -2.08
NEDD4L-212ENST00000585594 TRIM11Q96F44 468 aa2.04□□□□□ -2.08
NEDD4L-212ENST00000585594 KIF12Q96FN5 646 aa2.04□□□□□ -2.08
NEDD4L-212ENST00000585594 SLC39A13Q96H72 371 aa2.04□□□□□ -2.08
NEDD4L-212ENST00000585594 RSRC1Q96IZ7 334 aaKnown RBP2.04□□□□□ -2.08
NEDD4L-212ENST00000585594 GPR101Q96P66 508 aaPredicted RBP2.04□□□□□ -2.08
NEDD4L-212ENST00000585594 FEZ1Q99689 392 aa2.04□□□□□ -2.08
NEDD4L-212ENST00000585594 SLX1AQ9BQ83 275 aa2.04□□□□□ -2.08
NEDD4L-212ENST00000585594 MAK16Q9BXY0 300 aaKnown RBP2.04□□□□□ -2.08
NEDD4L-212ENST00000585594 DNAJC25Q9H1X3 360 aa2.04□□□□□ -2.08
NEDD4L-212ENST00000585594 SLKQ9H2G2 1235 aaPredicted RBP2.04□□□□□ -2.08
NEDD4L-212ENST00000585594 ARNT2Q9HBZ2 717 aa2.04□□□□□ -2.08
NEDD4L-212ENST00000585594 TRPV5Q9NQA5 729 aa2.04□□□□□ -2.08
NEDD4L-212ENST00000585594 CHST12Q9NRB3 414 aa2.04□□□□□ -2.08
NEDD4L-212ENST00000585594 GINM1Q9NU53 330 aa2.04□□□□□ -2.08
NEDD4L-212ENST00000585594 TYW1Q9NV66 732 aaKnown RBP2.04□□□□□ -2.08
NEDD4L-212ENST00000585594 ETAA1Q9NY74 926 aa2.04□□□□□ -2.08
NEDD4L-212ENST00000585594 CALCOCO1Q9P1Z2 691 aa2.04□□□□□ -2.08
NEDD4L-212ENST00000585594 CPSF2Q9P2I0 782 aaKnown RBP2.04□□□□□ -2.08
NEDD4L-212ENST00000585594 SEL1LQ9UBV2 794 aa2.04□□□□□ -2.08
NEDD4L-212ENST00000585594 CLIP2Q9UDT6 1046 aa2.04□□□□□ -2.08
NEDD4L-212ENST00000585594 TBK1Q9UHD2 729 aa2.04□□□□□ -2.08
NEDD4L-212ENST00000585594 DDX41Q9UJV9 622 aaKnown RBP2.04□□□□□ -2.08
NEDD4L-212ENST00000585594 GTF3C4Q9UKN8 822 aa2.04□□□□□ -2.08
NEDD4L-212ENST00000585594 CFAP45Q9UL16 551 aa2.04□□□□□ -2.08
NEDD4L-212ENST00000585594 ATP6V0A2Q9Y487 856 aa2.04□□□□□ -2.08
NEDD4L-212ENST00000585594 CCDC61Q9Y6R9 512 aa2.04□□□□□ -2.08
NEDD4L-212ENST00000585594 IQCA1LA6NCM1 817 aa2.03□□□□□ -2.08
NEDD4L-212ENST00000585594 SOWAHDA6NJG2 315 aa2.03□□□□□ -2.08
NEDD4L-212ENST00000585594 PRRT4C9JH25 899 aa2.03□□□□□ -2.08
NEDD4L-212ENST00000585594 F8VZ95 297 aa2.03□□□□□ -2.08
NEDD4L-212ENST00000585594 hCG_1984214I3L0E3 225 aa2.03□□□□□ -2.08
NEDD4L-212ENST00000585594 FOXN3O00409 490 aaPredicted RBP2.03□□□□□ -2.08
NEDD4L-212ENST00000585594 MYO1BO43795 1136 aa2.03□□□□□ -2.08
NEDD4L-212ENST00000585594 TCEA3O75764 348 aa2.03□□□□□ -2.08
NEDD4L-212ENST00000585594 PAK3O75914 559 aaPredicted RBP2.03□□□□□ -2.08
NEDD4L-212ENST00000585594 BBOX1O75936 387 aa2.03□□□□□ -2.08
NEDD4L-212ENST00000585594 RAPGEF3O95398 923 aa2.03□□□□□ -2.08
NEDD4L-212ENST00000585594 BAG4O95429 457 aaKnown RBP2.03□□□□□ -2.08
NEDD4L-212ENST00000585594 SRGNP10124 158 aa2.03□□□□□ -2.08
NEDD4L-212ENST00000585594 IMPDH2P12268 514 aa2.03□□□□□ -2.08
NEDD4L-212ENST00000585594 MYCLP1P12525 358 aaPredicted RBP2.03□□□□□ -2.08
NEDD4L-212ENST00000585594 XRCC5P13010 732 aaKnown RBP2.03□□□□□ -2.08
NEDD4L-212ENST00000585594 GYS1P13807 737 aa2.03□□□□□ -2.08
NEDD4L-212ENST00000585594 CCNCP24863 283 aa2.03□□□□□ -2.08
NEDD4L-212ENST00000585594 SMARCA1P28370 1054 aa2.03□□□□□ -2.08
NEDD4L-212ENST00000585594 LMOD1P29536 600 aaPredicted RBP2.03□□□□□ -2.08
NEDD4L-212ENST00000585594 ALDH1B1P30837 517 aa2.03□□□□□ -2.08
NEDD4L-212ENST00000585594 CTHP32929 405 aa2.03□□□□□ -2.08
NEDD4L-212ENST00000585594 NOS2P35228 1153 aa2.03□□□□□ -2.08
NEDD4L-212ENST00000585594 TIE1P35590 1138 aa2.03□□□□□ -2.08
NEDD4L-212ENST00000585594 ADD2P35612 726 aa2.03□□□□□ -2.08
NEDD4L-212ENST00000585594 PRPHP41219 470 aa2.03□□□□□ -2.08
NEDD4L-212ENST00000585594 MLLT3P42568 568 aaPredicted RBP2.03□□□□□ -2.08
NEDD4L-212ENST00000585594 NOP2P46087 812 aaKnown RBP2.03□□□□□ -2.08
NEDD4L-212ENST00000585594 GJA8P48165 433 aa2.03□□□□□ -2.08
NEDD4L-212ENST00000585594 PPM1FP49593 454 aaPredicted RBP2.03□□□□□ -2.08
NEDD4L-212ENST00000585594 UBASH3AP57075 661 aa2.03□□□□□ -2.08
NEDD4L-212ENST00000585594 INHBEP58166 350 aa2.03□□□□□ -2.08
NEDD4L-212ENST00000585594 RBL2Q08999 1139 aa2.03□□□□□ -2.08
NEDD4L-212ENST00000585594 NFX1Q12986 1120 aaKnown RBP2.03□□□□□ -2.08
NEDD4L-212ENST00000585594 MRPL28Q13084 256 aaKnown RBP2.03□□□□□ -2.08
NEDD4L-212ENST00000585594 ZBTB17Q13105 803 aa2.03□□□□□ -2.08
NEDD4L-212ENST00000585594 PDE1CQ14123 709 aaPredicted RBP2.03□□□□□ -2.08
NEDD4L-212ENST00000585594 EIF4A2Q14240 407 aaKnown RBP2.03□□□□□ -2.08
NEDD4L-212ENST00000585594 SMC1AQ14683 1233 aaKnown RBP2.03□□□□□ -2.08
NEDD4L-212ENST00000585594 MYBPC3Q14896 1274 aa2.03□□□□□ -2.08
NEDD4L-212ENST00000585594 TAF7Q15545 349 aaPredicted RBP2.03□□□□□ -2.08
NEDD4L-212ENST00000585594 PDCD2Q16342 344 aaPredicted RBP2.03□□□□□ -2.08
NEDD4L-212ENST00000585594 KIF4BQ2VIQ3 1234 aa2.03□□□□□ -2.08
NEDD4L-212ENST00000585594 LARP7Q4G0J3 582 aaKnown RBP eCLIP2.03□□□□□ -2.08
NEDD4L-212ENST00000585594 PREPLQ4J6C6 727 aaPredicted RBP2.03□□□□□ -2.08
NEDD4L-212ENST00000585594 CCDC178Q5BJE1 867 aa2.03□□□□□ -2.08
NEDD4L-212ENST00000585594 CFAP58Q5T655 872 aa2.03□□□□□ -2.08
NEDD4L-212ENST00000585594 ACBD5Q5T8D3 534 aaPredicted RBP2.03□□□□□ -2.08
NEDD4L-212ENST00000585594 RNF20Q5VTR2 975 aa2.03□□□□□ -2.08
NEDD4L-212ENST00000585594 MYSM1Q5VVJ2 828 aa2.03□□□□□ -2.08
NEDD4L-212ENST00000585594 ANO1Q5XXA6 986 aa2.03□□□□□ -2.08
NEDD4L-212ENST00000585594 TSHZ3Q63HK5 1081 aa2.03□□□□□ -2.08
NEDD4L-212ENST00000585594 MCTP2Q6DN12 878 aa2.03□□□□□ -2.08
NEDD4L-212ENST00000585594 FAAH2Q6GMR7 532 aa2.03□□□□□ -2.08
NEDD4L-212ENST00000585594 ISM2Q6H9L7 571 aa2.03□□□□□ -2.08
NEDD4L-212ENST00000585594 PDXDC2PQ6P474 469 aa2.03□□□□□ -2.08
NEDD4L-212ENST00000585594 KSR2Q6VAB6 950 aa2.03□□□□□ -2.08
NEDD4L-212ENST00000585594 ZNF771Q7L3S4 317 aaPredicted RBP2.03□□□□□ -2.08
NEDD4L-212ENST00000585594 MCM10Q7L590 875 aa2.03□□□□□ -2.08
NEDD4L-212ENST00000585594 FBXO33Q7Z6M2 555 aa2.03□□□□□ -2.08
NEDD4L-212ENST00000585594 ZNF467Q7Z7K2 595 aaPredicted RBP2.03□□□□□ -2.08
NEDD4L-212ENST00000585594 USP48Q86UV5 1035 aa2.03□□□□□ -2.08
NEDD4L-212ENST00000585594 RASSF3Q86WH2 238 aa2.03□□□□□ -2.08
NEDD4L-212ENST00000585594 NCAPG2Q86XI2 1143 aa2.03□□□□□ -2.08
NEDD4L-212ENST00000585594 DZIP1Q86YF9 867 aaKnown RBP2.03□□□□□ -2.08
NEDD4L-212ENST00000585594 MYLK4Q86YV6 388 aaPredicted RBP2.03□□□□□ -2.08
NEDD4L-212ENST00000585594 ANKRD18AQ8IVF6 992 aa2.03□□□□□ -2.08
NEDD4L-212ENST00000585594 CCDC65Q8IXS2 484 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms