RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 SLC15A2Q16348 729 aa17.07■□□□□ 0.32
UBBP4-202ENST00000584755 METTL24Q5JXM2 366 aa17.07■□□□□ 0.32
UBBP4-202ENST00000584755 CNTROBQ8N137 903 aa17.07■□□□□ 0.32
UBBP4-202ENST00000584755 ARAP2Q8WZ64 1704 aa17.07■□□□□ 0.32
UBBP4-202ENST00000584755 TIMM10P62072 90 aa17.06■□□□□ 0.32
UBBP4-202ENST00000584755 SF3B2Q13435 895 aaKnown RBP17.06■□□□□ 0.32
UBBP4-202ENST00000584755 CASC1Q6TDU7 716 aa17.06■□□□□ 0.32
UBBP4-202ENST00000584755 MPHOSPH8Q99549 860 aa17.06■□□□□ 0.32
UBBP4-202ENST00000584755 UPF2Q9HAU5 1272 aaKnown RBP17.06■□□□□ 0.32
UBBP4-202ENST00000584755 SPEF2Q9C093 1822 aa17.06■□□□□ 0.32
UBBP4-202ENST00000584755 FGFR2P21802 821 aa17.05■□□□□ 0.32
UBBP4-202ENST00000584755 CHMLP26374 656 aa17.05■□□□□ 0.32
UBBP4-202ENST00000584755 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.05■□□□□ 0.32
UBBP4-202ENST00000584755 RILPL2Q969X0 211 aa17.05■□□□□ 0.32
UBBP4-202ENST00000584755 TBC1D32Q96NH3 1257 aa17.05■□□□□ 0.32
UBBP4-202ENST00000584755 BSDC1Q9NW68 430 aaPredicted RBP17.05■□□□□ 0.32
UBBP4-202ENST00000584755 A0A1B0GUL6 1792 aa17.05■□□□□ 0.32
UBBP4-202ENST00000584755 MFAP1P55081 439 aaKnown RBP17.05■□□□□ 0.32
UBBP4-202ENST00000584755 ATP2B3Q16720 1220 aa17.05■□□□□ 0.32
UBBP4-202ENST00000584755 CCDC125Q86Z20 511 aa17.05■□□□□ 0.32
UBBP4-202ENST00000584755 ANKRD18AQ8IVF6 992 aa17.05■□□□□ 0.32
UBBP4-202ENST00000584755 EVI5LQ96CN4 794 aa17.05■□□□□ 0.32
UBBP4-202ENST00000584755 NEUROD6Q96NK8 337 aa17.05■□□□□ 0.32
UBBP4-202ENST00000584755 STK32BQ9NY57 414 aa17.05■□□□□ 0.32
UBBP4-202ENST00000584755 KLRG2A4D1S0 409 aaPredicted RBP17.04■□□□□ 0.32
UBBP4-202ENST00000584755 ST5P78524 1137 aa17.04■□□□□ 0.32
UBBP4-202ENST00000584755 CRY2Q49AN0 593 aa17.04■□□□□ 0.32
UBBP4-202ENST00000584755 CCDC24Q8N4L8 307 aa17.04■□□□□ 0.32
UBBP4-202ENST00000584755 XAGE2Q96GT9 111 aa17.04■□□□□ 0.32
UBBP4-202ENST00000584755 HAUS7Q99871 368 aa17.04■□□□□ 0.32
UBBP4-202ENST00000584755 BOLA2Q9H3K6 86 aa17.04■□□□□ 0.32
UBBP4-202ENST00000584755 MAP4K4O95819 1239 aaPredicted RBP17.03■□□□□ 0.32
UBBP4-202ENST00000584755 PUM3Q15397 648 aaKnown RBP17.03■□□□□ 0.32
UBBP4-202ENST00000584755 LPIN2Q92539 896 aa17.03■□□□□ 0.32
UBBP4-202ENST00000584755 CELF1Q92879 486 aaKnown RBP17.03■□□□□ 0.32
UBBP4-202ENST00000584755 ZNF512BQ96KM6 892 aaPredicted RBP17.03■□□□□ 0.32
UBBP4-202ENST00000584755 TAF1P21675 1872 aa17.03■□□□□ 0.32
UBBP4-202ENST00000584755 NPHP1O15259 732 aa17.02■□□□□ 0.32
UBBP4-202ENST00000584755 ADORA1P30542 326 aa17.02■□□□□ 0.32
UBBP4-202ENST00000584755 RPS8P62241 208 aaKnown RBP17.02■□□□□ 0.32
UBBP4-202ENST00000584755 DEFB132Q7Z7B7 95 aa17.02■□□□□ 0.32
UBBP4-202ENST00000584755 TICAM2Q86XR7 235 aa17.02■□□□□ 0.32
UBBP4-202ENST00000584755 ESYT1Q9BSJ8 1104 aa17.02■□□□□ 0.32
UBBP4-202ENST00000584755 RFX7Q2KHR2 1363 aa17.02■□□□□ 0.31
UBBP4-202ENST00000584755 MSH5O43196 834 aa17.01■□□□□ 0.31
UBBP4-202ENST00000584755 ANP32AP39687 249 aaKnown RBP17.01■□□□□ 0.31
UBBP4-202ENST00000584755 RBM25P49756 843 aaKnown RBP17.01■□□□□ 0.31
UBBP4-202ENST00000584755 CHRNDQ07001 517 aa17.01■□□□□ 0.31
UBBP4-202ENST00000584755 DDX46Q7L014 1031 aaKnown RBP17.01■□□□□ 0.31
UBBP4-202ENST00000584755 C22orf23Q9BZE7 217 aa17.01■□□□□ 0.31
UBBP4-202ENST00000584755 CCDC158Q5M9N0 1113 aa17■□□□□ 0.31
UBBP4-202ENST00000584755 ANKRD31Q8N7Z5 1873 aa17■□□□□ 0.31
UBBP4-202ENST00000584755 GRAPQ13588 217 aa16.99■□□□□ 0.31
UBBP4-202ENST00000584755 HELBQ8NG08 1087 aaPredicted RBP16.99■□□□□ 0.31
UBBP4-202ENST00000584755 GRAPLQ8TC17 118 aaPredicted RBP16.99■□□□□ 0.31
UBBP4-202ENST00000584755 MINPP1Q9UNW1 487 aa16.99■□□□□ 0.31
UBBP4-202ENST00000584755 HIP1O00291 1037 aa16.99■□□□□ 0.31
UBBP4-202ENST00000584755 EPB41L2O43491 1005 aaKnown RBP16.99■□□□□ 0.31
UBBP4-202ENST00000584755 REC8O95072 547 aa16.99■□□□□ 0.31
UBBP4-202ENST00000584755 IFIT1P09914 478 aaKnown RBP16.99■□□□□ 0.31
UBBP4-202ENST00000584755 SLC5A1P13866 664 aa16.99■□□□□ 0.31
UBBP4-202ENST00000584755 HOXA10P31260 410 aaPredicted RBP16.99■□□□□ 0.31
UBBP4-202ENST00000584755 BRIP1Q9BX63 1249 aa16.99■□□□□ 0.31
UBBP4-202ENST00000584755 USP26Q9BXU7 913 aa16.99■□□□□ 0.31
UBBP4-202ENST00000584755 TAF5LO75529 589 aa16.98■□□□□ 0.31
UBBP4-202ENST00000584755 MMP10P09238 476 aa16.98■□□□□ 0.31
UBBP4-202ENST00000584755 ARID4AP29374 1257 aaPredicted RBP16.98■□□□□ 0.31
UBBP4-202ENST00000584755 UBE4AQ14139 1066 aa16.98■□□□□ 0.31
UBBP4-202ENST00000584755 TTC39AQ5SRH9 613 aa16.98■□□□□ 0.31
UBBP4-202ENST00000584755 GORABQ5T7V8 394 aa16.98■□□□□ 0.31
UBBP4-202ENST00000584755 PARP3Q9Y6F1 533 aa16.98■□□□□ 0.31
UBBP4-202ENST00000584755 AKAP11Q9UKA4 1901 aa16.97■□□□□ 0.31
UBBP4-202ENST00000584755 SGSM2O43147 1006 aa16.97■□□□□ 0.31
UBBP4-202ENST00000584755 KBTBD3Q8NAB2 608 aa16.97■□□□□ 0.31
UBBP4-202ENST00000584755 EDC3Q96F86 508 aaKnown RBP16.97■□□□□ 0.31
UBBP4-202ENST00000584755 ANKRD2Q9GZV1 360 aa16.97■□□□□ 0.31
UBBP4-202ENST00000584755 SNRKQ9NRH2 765 aa16.97■□□□□ 0.31
UBBP4-202ENST00000584755 PAG1Q9NWQ8 432 aa16.97■□□□□ 0.31
UBBP4-202ENST00000584755 CCDC102BQ68D86 513 aa16.96■□□□□ 0.31
UBBP4-202ENST00000584755 RPGRQ92834 1020 aaKnown RBP16.96■□□□□ 0.31
UBBP4-202ENST00000584755 CRAMP1Q96RY5 1269 aa16.96■□□□□ 0.31
UBBP4-202ENST00000584755 DNAJC2Q99543 621 aaKnown RBP16.96■□□□□ 0.31
UBBP4-202ENST00000584755 FSD1Q9BTV5 496 aa16.96■□□□□ 0.31
UBBP4-202ENST00000584755 IL25Q9H293 177 aa16.96■□□□□ 0.31
UBBP4-202ENST00000584755 DIAPH3Q9NSV4 1193 aa16.96■□□□□ 0.31
UBBP4-202ENST00000584755 SNAP23O00161 211 aa16.95■□□□□ 0.3
UBBP4-202ENST00000584755 UQCRFS1P1P0C7P4 283 aa16.95■□□□□ 0.3
UBBP4-202ENST00000584755 SCARF1Q14162 830 aa16.95■□□□□ 0.3
UBBP4-202ENST00000584755 RUFY2Q8WXA3 655 aa16.95■□□□□ 0.3
UBBP4-202ENST00000584755 RBM17Q96I25 401 aaKnown RBP16.95■□□□□ 0.3
UBBP4-202ENST00000584755 RAD50Q92878 1312 aa16.94■□□□□ 0.3
UBBP4-202ENST00000584755 ZBTB22O15209 634 aa16.94■□□□□ 0.3
UBBP4-202ENST00000584755 MCAMP43121 646 aa16.94■□□□□ 0.3
UBBP4-202ENST00000584755 PHKA1P46020 1223 aa16.94■□□□□ 0.3
UBBP4-202ENST00000584755 MSL1Q68DK7 614 aa16.94■□□□□ 0.3
UBBP4-202ENST00000584755 NDUFB9Q9Y6M9 179 aa16.94■□□□□ 0.3
UBBP4-202ENST00000584755 LRRC37AA6NMS7 1700 aa16.94■□□□□ 0.3
UBBP4-202ENST00000584755 ZNF804BA4D1E1 1349 aa16.94■□□□□ 0.3
UBBP4-202ENST00000584755 GOLIM4O00461 696 aa16.93■□□□□ 0.3
UBBP4-202ENST00000584755 CWC27Q6UX04 472 aaKnown RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms