RNA–Protein interactions for RNA: ENST00000583277.1

SENP3-208, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 1,578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-208ENST00000583277 RPGRQ92834 1020 aaKnown RBP17.95■□□□□ 0.46
SENP3-208ENST00000583277 BRIP1Q9BX63 1249 aa17.95■□□□□ 0.46
SENP3-208ENST00000583277 AK9Q5TCS8 1911 aa17.95■□□□□ 0.46
SENP3-208ENST00000583277 ECHDC1Q9NTX5 307 aa17.94■□□□□ 0.46
SENP3-208ENST00000583277 BSDC1Q9NW68 430 aaPredicted RBP17.94■□□□□ 0.46
SENP3-208ENST00000583277 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.94■□□□□ 0.46
SENP3-208ENST00000583277 COL4A1P02462 1669 aa17.93■□□□□ 0.46
SENP3-208ENST00000583277 KLRG2A4D1S0 409 aaPredicted RBP17.93■□□□□ 0.46
SENP3-208ENST00000583277 GLRX3O76003 335 aaKnown RBP17.92■□□□□ 0.46
SENP3-208ENST00000583277 GSPT1P15170 499 aaKnown RBP17.92■□□□□ 0.46
SENP3-208ENST00000583277 RPS8P62241 208 aaKnown RBP17.92■□□□□ 0.46
SENP3-208ENST00000583277 VGLL2Q8N8G2 317 aa17.92■□□□□ 0.46
SENP3-208ENST00000583277 CCDC8Q9H0W5 538 aaPredicted RBP17.92■□□□□ 0.46
SENP3-208ENST00000583277 A0A1B0GUL7 405 aa17.91■□□□□ 0.46
SENP3-208ENST00000583277 PDE8BO95263 885 aa17.91■□□□□ 0.46
SENP3-208ENST00000583277 PDE6BP35913 854 aa17.91■□□□□ 0.46
SENP3-208ENST00000583277 GRAPQ13588 217 aa17.91■□□□□ 0.46
SENP3-208ENST00000583277 ATP2B3Q16720 1220 aa17.91■□□□□ 0.46
SENP3-208ENST00000583277 GRAPLQ8TC17 118 aaPredicted RBP17.91■□□□□ 0.46
SENP3-208ENST00000583277 CELF1Q92879 486 aaKnown RBP17.91■□□□□ 0.46
SENP3-208ENST00000583277 RBM17Q96I25 401 aaKnown RBP17.91■□□□□ 0.46
SENP3-208ENST00000583277 DBNLQ9UJU6 430 aaKnown RBP17.91■□□□□ 0.46
SENP3-208ENST00000583277 COL11A2P13942 1736 aaPredicted RBP17.91■□□□□ 0.46
SENP3-208ENST00000583277 HOXA10P31260 410 aaPredicted RBP17.91■□□□□ 0.46
SENP3-208ENST00000583277 PUM3Q15397 648 aaKnown RBP17.91■□□□□ 0.46
SENP3-208ENST00000583277 TSHZ3Q63HK5 1081 aa17.91■□□□□ 0.46
SENP3-208ENST00000583277 PI4K2BQ8TCG2 481 aa17.91■□□□□ 0.46
SENP3-208ENST00000583277 TLR7Q9NYK1 1049 aaKnown RBP17.91■□□□□ 0.46
SENP3-208ENST00000583277 C8orf34Q49A92 452 aa17.9■□□□□ 0.46
SENP3-208ENST00000583277 NEUROD6Q96NK8 337 aa17.9■□□□□ 0.46
SENP3-208ENST00000583277 BACH2Q9BYV9 841 aa17.9■□□□□ 0.46
SENP3-208ENST00000583277 CHRNDQ07001 517 aa17.89■□□□□ 0.45
SENP3-208ENST00000583277 CRAMP1Q96RY5 1269 aa17.89■□□□□ 0.45
SENP3-208ENST00000583277 DBNDD2Q9BQY9 259 aa17.89■□□□□ 0.45
SENP3-208ENST00000583277 PDGFDQ9GZP0 370 aaPredicted RBP17.89■□□□□ 0.45
SENP3-208ENST00000583277 TMC4Q7Z404 712 aa17.88■□□□□ 0.45
SENP3-208ENST00000583277 LPIN2Q92539 896 aa17.88■□□□□ 0.45
SENP3-208ENST00000583277 ANKRD2Q9GZV1 360 aa17.88■□□□□ 0.45
SENP3-208ENST00000583277 C10orf71Q711Q0 1435 aa17.88■□□□□ 0.45
SENP3-208ENST00000583277 SLC5A1P13866 664 aa17.87■□□□□ 0.45
SENP3-208ENST00000583277 NPR1P16066 1061 aa17.87■□□□□ 0.45
SENP3-208ENST00000583277 ATP5JP18859 108 aa17.87■□□□□ 0.45
SENP3-208ENST00000583277 SDSP20132 328 aa17.87■□□□□ 0.45
SENP3-208ENST00000583277 TIMM10P62072 90 aa17.87■□□□□ 0.45
SENP3-208ENST00000583277 MINPP1Q9UNW1 487 aa17.87■□□□□ 0.45
SENP3-208ENST00000583277 LRRC37AA6NMS7 1700 aa17.87■□□□□ 0.45
SENP3-208ENST00000583277 CDC45O75419 566 aa17.87■□□□□ 0.45
SENP3-208ENST00000583277 SRGNP10124 158 aa17.87■□□□□ 0.45
SENP3-208ENST00000583277 FGFR2P21802 821 aa17.87■□□□□ 0.45
SENP3-208ENST00000583277 GORABQ5T7V8 394 aa17.87■□□□□ 0.45
SENP3-208ENST00000583277 XAGE2Q96GT9 111 aa17.87■□□□□ 0.45
SENP3-208ENST00000583277 MTFR1LQ9H019 292 aa17.87■□□□□ 0.45
SENP3-208ENST00000583277 KIF13BQ9NQT8 1826 aa17.87■□□□□ 0.45
SENP3-208ENST00000583277 TRIM6-TRIM34B2RNG4 842 aa17.86■□□□□ 0.45
SENP3-208ENST00000583277 BBOX1O75936 387 aa17.86■□□□□ 0.45
SENP3-208ENST00000583277 IFIT1P09914 478 aaKnown RBP17.86■□□□□ 0.45
SENP3-208ENST00000583277 CCDC158Q5M9N0 1113 aa17.86■□□□□ 0.45
SENP3-208ENST00000583277 CNTROBQ8N137 903 aa17.86■□□□□ 0.45
SENP3-208ENST00000583277 DLEC1Q9Y238 1755 aa17.86■□□□□ 0.45
SENP3-208ENST00000583277 EIF5BO60841 1220 aaKnown RBP17.85■□□□□ 0.45
SENP3-208ENST00000583277 UBE4AQ14139 1066 aa17.85■□□□□ 0.45
SENP3-208ENST00000583277 R3HDM1Q15032 1099 aaKnown RBP17.85■□□□□ 0.45
SENP3-208ENST00000583277 CASC1Q6TDU7 716 aa17.85■□□□□ 0.45
SENP3-208ENST00000583277 HELBQ8NG08 1087 aaPredicted RBP17.85■□□□□ 0.45
SENP3-208ENST00000583277 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.85■□□□□ 0.45
SENP3-208ENST00000583277 MASTLQ96GX5 879 aa17.85■□□□□ 0.45
SENP3-208ENST00000583277 TAF5LO75529 589 aa17.84■□□□□ 0.45
SENP3-208ENST00000583277 POLD1P28340 1107 aa17.84■□□□□ 0.45
SENP3-208ENST00000583277 ALDH1B1P30837 517 aa17.84■□□□□ 0.45
SENP3-208ENST00000583277 CACNA1SQ13698 1873 aa17.84■□□□□ 0.45
SENP3-208ENST00000583277 H0YIN7 160 aa17.83■□□□□ 0.45
SENP3-208ENST00000583277 ADORA1P30542 326 aa17.83■□□□□ 0.45
SENP3-208ENST00000583277 TTC39AQ5SRH9 613 aa17.83■□□□□ 0.45
SENP3-208ENST00000583277 C2CD5Q86YS7 1000 aa17.83■□□□□ 0.45
SENP3-208ENST00000583277 RILPL2Q969X0 211 aa17.83■□□□□ 0.45
SENP3-208ENST00000583277 EVI5LQ96CN4 794 aa17.83■□□□□ 0.45
SENP3-208ENST00000583277 KCNJ4P48050 445 aa17.83■□□□□ 0.44
SENP3-208ENST00000583277 STYK1Q6J9G0 422 aa17.83■□□□□ 0.44
SENP3-208ENST00000583277 ZNF512BQ96KM6 892 aaPredicted RBP17.83■□□□□ 0.44
SENP3-208ENST00000583277 HAUS7Q99871 368 aa17.83■□□□□ 0.44
SENP3-208ENST00000583277 BOLA2Q9H3K6 86 aa17.83■□□□□ 0.44
SENP3-208ENST00000583277 XDHP47989 1333 aa17.82■□□□□ 0.44
SENP3-208ENST00000583277 PPEF1O14829 653 aaPredicted RBP17.82■□□□□ 0.44
SENP3-208ENST00000583277 ZBTB7AO95365 584 aa17.82■□□□□ 0.44
SENP3-208ENST00000583277 TBC1D9Q6ZT07 1266 aa17.82■□□□□ 0.44
SENP3-208ENST00000583277 UQCRFS1P1P0C7P4 283 aa17.81■□□□□ 0.44
SENP3-208ENST00000583277 TSHZ2Q9NRE2 1034 aa17.81■□□□□ 0.44
SENP3-208ENST00000583277 LTBP1Q14766 1721 aa17.81■□□□□ 0.44
SENP3-208ENST00000583277 AKAP11Q9UKA4 1901 aa17.81■□□□□ 0.44
SENP3-208ENST00000583277 RFX7Q2KHR2 1363 aa17.81■□□□□ 0.44
SENP3-208ENST00000583277 ANKIB1Q9P2G1 1089 aa17.8■□□□□ 0.44
SENP3-208ENST00000583277 LEMD3Q9Y2U8 911 aa17.8■□□□□ 0.44
SENP3-208ENST00000583277 MYH13Q9UKX3 1938 aa17.8■□□□□ 0.44
SENP3-208ENST00000583277 MAP4K4O95819 1239 aaPredicted RBP17.79■□□□□ 0.44
SENP3-208ENST00000583277 ARID4AP29374 1257 aaPredicted RBP17.79■□□□□ 0.44
SENP3-208ENST00000583277 CCDC102BQ68D86 513 aa17.79■□□□□ 0.44
SENP3-208ENST00000583277 TICAM2Q86XR7 235 aa17.79■□□□□ 0.44
SENP3-208ENST00000583277 CNKSR1Q969H4 720 aa17.79■□□□□ 0.44
SENP3-208ENST00000583277 TMX4Q9H1E5 349 aaPredicted RBP17.79■□□□□ 0.44
SENP3-208ENST00000583277 ATP6V0A2Q9Y487 856 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms