RNA–Protein interactions for RNA: ENST00000583254.1

CTC1-211, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-211ENST00000583254 PRAMEF18Q5VWM3 479 aa9.38□□□□□ -0.91
CTC1-211ENST00000583254 CFHR5Q9BXR6 569 aa9.38□□□□□ -0.91
CTC1-211ENST00000583254 ZNF609O15014 1411 aa9.38□□□□□ -0.91
CTC1-211ENST00000583254 C6orf229H3BNL8 230 aa9.37□□□□□ -0.91
CTC1-211ENST00000583254 CNGB1Q14028 1251 aaPredicted RBP9.37□□□□□ -0.91
CTC1-211ENST00000583254 POLLQ9UGP5 575 aa9.37□□□□□ -0.91
CTC1-211ENST00000583254 NSFL1CQ9UNZ2 370 aaKnown RBP9.37□□□□□ -0.91
CTC1-211ENST00000583254 PITPNM2Q9BZ72 1349 aa9.36□□□□□ -0.91
CTC1-211ENST00000583254 H0YGN5 161 aa9.36□□□□□ -0.91
CTC1-211ENST00000583254 VIL1P09327 827 aaKnown RBP9.36□□□□□ -0.91
CTC1-211ENST00000583254 ZNF280AP59817 542 aaPredicted RBP9.36□□□□□ -0.91
CTC1-211ENST00000583254 GPSM2P81274 684 aa9.36□□□□□ -0.91
CTC1-211ENST00000583254 TAF7Q15545 349 aaPredicted RBP9.36□□□□□ -0.91
CTC1-211ENST00000583254 CHRDL2Q6WN34 429 aa9.36□□□□□ -0.91
CTC1-211ENST00000583254 TMC4Q7Z404 712 aa9.36□□□□□ -0.91
CTC1-211ENST00000583254 ZNF428Q96B54 188 aa9.36□□□□□ -0.91
CTC1-211ENST00000583254 OTUD5Q96G74 571 aa9.36□□□□□ -0.91
CTC1-211ENST00000583254 THUMPD2Q9BTF0 503 aaKnown RBP9.36□□□□□ -0.91
CTC1-211ENST00000583254 RANBP2P49792 3224 aaKnown RBP9.36□□□□□ -0.91
CTC1-211ENST00000583254 CEP290O15078 2479 aa9.36□□□□□ -0.91
CTC1-211ENST00000583254 DLG5Q8TDM6 1919 aa9.35□□□□□ -0.91
CTC1-211ENST00000583254 CD99L2Q8TCZ2 262 aa9.35□□□□□ -0.91
CTC1-211ENST00000583254 CELF1Q92879 486 aaKnown RBP9.35□□□□□ -0.91
CTC1-211ENST00000583254 ARMC5Q96C12 935 aa9.35□□□□□ -0.91
CTC1-211ENST00000583254 EYA3Q99504 573 aa9.35□□□□□ -0.91
CTC1-211ENST00000583254 PTPN22Q9Y2R2 807 aa9.35□□□□□ -0.91
CTC1-211ENST00000583254 EIF4A1P60842 406 aaKnown RBP9.34□□□□□ -0.91
CTC1-211ENST00000583254 PTPN12Q05209 780 aaKnown RBP9.34□□□□□ -0.91
CTC1-211ENST00000583254 TCIRG1Q13488 830 aa9.34□□□□□ -0.91
CTC1-211ENST00000583254 NLRP10Q86W26 655 aa9.34□□□□□ -0.91
CTC1-211ENST00000583254 TBC1D16Q8TBP0 767 aa9.34□□□□□ -0.91
CTC1-211ENST00000583254 MYOZ2Q9NPC6 264 aa9.34□□□□□ -0.91
CTC1-211ENST00000583254 TRMT112Q9UI30 125 aaKnown RBP9.34□□□□□ -0.91
CTC1-211ENST00000583254 LAMB1P07942 1786 aa9.34□□□□□ -0.91
CTC1-211ENST00000583254 SH3TC1Q8TE82 1336 aa9.33□□□□□ -0.92
CTC1-211ENST00000583254 ALDH1A1P00352 501 aa9.33□□□□□ -0.92
CTC1-211ENST00000583254 ANXA1P04083 346 aa9.33□□□□□ -0.92
CTC1-211ENST00000583254 NF2P35240 595 aa9.33□□□□□ -0.92
CTC1-211ENST00000583254 PRKG1Q13976 671 aa9.33□□□□□ -0.92
CTC1-211ENST00000583254 PROSER3Q2NL68 480 aa9.33□□□□□ -0.92
CTC1-211ENST00000583254 SPRYD7Q5W111 196 aa9.33□□□□□ -0.92
CTC1-211ENST00000583254 RSBN1LQ6PCB5 846 aaPredicted RBP9.33□□□□□ -0.92
CTC1-211ENST00000583254 LRP10Q7Z4F1 713 aa9.33□□□□□ -0.92
CTC1-211ENST00000583254 IFNL1Q8IU54 200 aa9.33□□□□□ -0.92
CTC1-211ENST00000583254 AGBL3Q8NEM8 1001 aa9.33□□□□□ -0.92
CTC1-211ENST00000583254 ERO1AQ96HE7 468 aa9.33□□□□□ -0.92
CTC1-211ENST00000583254 TMEM106CQ9BVX2 250 aa9.33□□□□□ -0.92
CTC1-211ENST00000583254 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.33□□□□□ -0.92
CTC1-211ENST00000583254 RBM27Q9P2N5 1060 aaKnown RBP9.33□□□□□ -0.92
CTC1-211ENST00000583254 ERBB4Q15303 1308 aa9.32□□□□□ -0.92
CTC1-211ENST00000583254 CUL9Q8IWT3 2517 aa9.32□□□□□ -0.92
CTC1-211ENST00000583254 G3V3G9 751 aa9.32□□□□□ -0.92
CTC1-211ENST00000583254 IGF2BP3O00425 579 aaKnown RBP eCLIP9.32□□□□□ -0.92
CTC1-211ENST00000583254 HTATSF1O43719 755 aaKnown RBP9.32□□□□□ -0.92
CTC1-211ENST00000583254 USP17L8P0C7I0 530 aa9.32□□□□□ -0.92
CTC1-211ENST00000583254 CAP1Q01518 475 aa9.32□□□□□ -0.92
CTC1-211ENST00000583254 NBPF9Q3BBW0 867 aa9.32□□□□□ -0.92
CTC1-211ENST00000583254 DCAF8Q5TAQ9 597 aa9.32□□□□□ -0.92
CTC1-211ENST00000583254 ZNF333Q96JL9 665 aa9.32□□□□□ -0.92
CTC1-211ENST00000583254 ZC3H12CQ9C0D7 883 aaKnown RBP9.32□□□□□ -0.92
CTC1-211ENST00000583254 EFCC1Q9HA90 598 aa9.32□□□□□ -0.92
CTC1-211ENST00000583254 FZD1Q9UP38 647 aa9.32□□□□□ -0.92
CTC1-211ENST00000583254 ZNF646O15015 1829 aaPredicted RBP9.32□□□□□ -0.92
CTC1-211ENST00000583254 PER1O15534 1290 aaPredicted RBP9.31□□□□□ -0.92
CTC1-211ENST00000583254 UFL1O94874 794 aa9.31□□□□□ -0.92
CTC1-211ENST00000583254 MYCP01106 439 aaPredicted RBP9.31□□□□□ -0.92
CTC1-211ENST00000583254 U2AF1L5P0DN76 240 aaPredicted RBP9.31□□□□□ -0.92
CTC1-211ENST00000583254 U2AF1Q01081 240 aaKnown RBP eCLIP9.31□□□□□ -0.92
CTC1-211ENST00000583254 SLC4A8Q2Y0W8 1093 aa9.31□□□□□ -0.92
CTC1-211ENST00000583254 HSP90AB3PQ58FF7 597 aa9.31□□□□□ -0.92
CTC1-211ENST00000583254 ARMC9Q7Z3E5 817 aa9.31□□□□□ -0.92
CTC1-211ENST00000583254 PNISRQ8TF01 805 aaKnown RBP9.31□□□□□ -0.92
CTC1-211ENST00000583254 GMLQ99445 158 aa9.31□□□□□ -0.92
CTC1-211ENST00000583254 MANSC4A6NHS7 340 aaPredicted RBP9.3□□□□□ -0.92
CTC1-211ENST00000583254 EIF2S2P20042 333 aaKnown RBP9.3□□□□□ -0.92
CTC1-211ENST00000583254 AIMP1Q12904 312 aaKnown RBP9.3□□□□□ -0.92
CTC1-211ENST00000583254 CRHR2Q13324 411 aa9.3□□□□□ -0.92
CTC1-211ENST00000583254 PDIA6Q15084 440 aa9.3□□□□□ -0.92
CTC1-211ENST00000583254 SLC9C1Q4G0N8 1177 aa9.3□□□□□ -0.92
CTC1-211ENST00000583254 CFAP53Q96M91 514 aa9.3□□□□□ -0.92
CTC1-211ENST00000583254 ANGEL1Q9UNK9 670 aaKnown RBP9.3□□□□□ -0.92
CTC1-211ENST00000583254 PTCH2Q9Y6C5 1203 aa9.3□□□□□ -0.92
CTC1-211ENST00000583254 ZSWIM8A7E2V4 1837 aa9.29□□□□□ -0.92
CTC1-211ENST00000583254 SASH1O94885 1247 aa9.29□□□□□ -0.92
CTC1-211ENST00000583254 LDLRAD1Q5T700 205 aa9.29□□□□□ -0.92
CTC1-211ENST00000583254 COPS6Q7L5N1 327 aa9.29□□□□□ -0.92
CTC1-211ENST00000583254 XAGE3Q8WTP9 111 aa9.29□□□□□ -0.92
CTC1-211ENST00000583254 NECTIN2Q92692 538 aa9.29□□□□□ -0.92
CTC1-211ENST00000583254 WNK4Q96J92 1243 aa9.29□□□□□ -0.92
CTC1-211ENST00000583254 PODXL2Q9NZ53 605 aa9.29□□□□□ -0.92
CTC1-211ENST00000583254 GGA1Q9UJY5 639 aa9.29□□□□□ -0.92
CTC1-211ENST00000583254 TIMELESSQ9UNS1 1208 aa9.29□□□□□ -0.92
CTC1-211ENST00000583254 NUDCQ9Y266 331 aa9.29□□□□□ -0.92
CTC1-211ENST00000583254 UNC80Q8N2C7 3258 aa9.28□□□□□ -0.92
CTC1-211ENST00000583254 USP17L3A6NCW0 530 aa9.28□□□□□ -0.92
CTC1-211ENST00000583254 USP17L4A6NCW7 530 aa9.28□□□□□ -0.92
CTC1-211ENST00000583254 WNT10BO00744 389 aa9.28□□□□□ -0.92
CTC1-211ENST00000583254 MNX1P50219 401 aaPredicted RBP9.28□□□□□ -0.92
CTC1-211ENST00000583254 SP3Q02447 781 aa9.28□□□□□ -0.92
CTC1-211ENST00000583254 SF3B3Q15393 1217 aaKnown RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms