RNA–Protein interactions for RNA: ENST00000583206.1

TVP23C-209, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 5

Gene TVP23C, Length 701 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-209ENST00000583206 HDAC9Q9UKV0 1011 aa12.43□□□□□ -0.42
TVP23C-209ENST00000583206 LRRC37AA6NMS7 1700 aa12.42□□□□□ -0.42
TVP23C-209ENST00000583206 COL4A1P02462 1669 aa12.42□□□□□ -0.42
TVP23C-209ENST00000583206 PPP2R1AP30153 589 aa12.42□□□□□ -0.42
TVP23C-209ENST00000583206 FXR1P51114 621 aaKnown RBP eCLIP12.42□□□□□ -0.42
TVP23C-209ENST00000583206 SF3B3Q15393 1217 aaKnown RBP12.42□□□□□ -0.42
TVP23C-209ENST00000583206 ANGEL2Q5VTE6 544 aaKnown RBP12.42□□□□□ -0.42
TVP23C-209ENST00000583206 COPS6Q7L5N1 327 aa12.42□□□□□ -0.42
TVP23C-209ENST00000583206 TBC1D16Q8TBP0 767 aa12.42□□□□□ -0.42
TVP23C-209ENST00000583206 PLEKHF1Q96S99 279 aa12.42□□□□□ -0.42
TVP23C-209ENST00000583206 GMLQ99445 158 aa12.42□□□□□ -0.42
TVP23C-209ENST00000583206 CFHR5Q9BXR6 569 aa12.42□□□□□ -0.42
TVP23C-209ENST00000583206 TRMT112Q9UI30 125 aaKnown RBP12.42□□□□□ -0.42
TVP23C-209ENST00000583206 SH3TC1Q8TE82 1336 aa12.41□□□□□ -0.42
TVP23C-209ENST00000583206 UBE2Q2LH0YL09 131 aa12.41□□□□□ -0.42
TVP23C-209ENST00000583206 SCN9AQ15858 1988 aa12.4□□□□□ -0.42
TVP23C-209ENST00000583206 ZNF609O15014 1411 aa12.4□□□□□ -0.42
TVP23C-209ENST00000583206 POTEFA5A3E0 1075 aa12.4□□□□□ -0.42
TVP23C-209ENST00000583206 C6orf229H3BNL8 230 aa12.4□□□□□ -0.42
TVP23C-209ENST00000583206 HSP90AB3PQ58FF7 597 aa12.4□□□□□ -0.42
TVP23C-209ENST00000583206 ZNF428Q96B54 188 aa12.4□□□□□ -0.42
TVP23C-209ENST00000583206 SCAF8Q9UPN6 1271 aaKnown RBP12.4□□□□□ -0.42
TVP23C-209ENST00000583206 A0A0C4DFX4 3053 aa12.39□□□□□ -0.43
TVP23C-209ENST00000583206 EIF2S2P20042 333 aaKnown RBP12.39□□□□□ -0.43
TVP23C-209ENST00000583206 PRAMEF18Q5VWM3 479 aa12.39□□□□□ -0.43
TVP23C-209ENST00000583206 AGBL3Q8NEM8 1001 aa12.39□□□□□ -0.43
TVP23C-209ENST00000583206 XAGE3Q8WTP9 111 aa12.39□□□□□ -0.43
TVP23C-209ENST00000583206 PCGF6Q9BYE7 350 aa12.39□□□□□ -0.43
TVP23C-209ENST00000583206 PODXL2Q9NZ53 605 aa12.39□□□□□ -0.43
TVP23C-209ENST00000583206 PITPNM2Q9BZ72 1349 aa12.38□□□□□ -0.43
TVP23C-209ENST00000583206 PAPPA2Q9BXP8 1791 aa12.38□□□□□ -0.43
TVP23C-209ENST00000583206 FKTNO75072 461 aa12.38□□□□□ -0.43
TVP23C-209ENST00000583206 NFE2L2Q16236 605 aa12.38□□□□□ -0.43
TVP23C-209ENST00000583206 RSBN1LQ6PCB5 846 aaPredicted RBP12.38□□□□□ -0.43
TVP23C-209ENST00000583206 ISCA1Q9BUE6 129 aa12.38□□□□□ -0.43
TVP23C-209ENST00000583206 RPS8P62241 208 aaKnown RBP12.37□□□□□ -0.43
TVP23C-209ENST00000583206 AIMP1Q12904 312 aaKnown RBP12.37□□□□□ -0.43
TVP23C-209ENST00000583206 NECTIN2Q92692 538 aa12.37□□□□□ -0.43
TVP23C-209ENST00000583206 FAM89AQ96GI7 184 aa12.37□□□□□ -0.43
TVP23C-209ENST00000583206 EYA3Q99504 573 aa12.37□□□□□ -0.43
TVP23C-209ENST00000583206 ZC3H12CQ9C0D7 883 aaKnown RBP12.37□□□□□ -0.43
TVP23C-209ENST00000583206 MYOZ2Q9NPC6 264 aa12.37□□□□□ -0.43
TVP23C-209ENST00000583206 PTPN12Q05209 780 aaKnown RBP12.36□□□□□ -0.43
TVP23C-209ENST00000583206 NBPF9Q3BBW0 867 aa12.36□□□□□ -0.43
TVP23C-209ENST00000583206 RANBP2P49792 3224 aaKnown RBP12.35□□□□□ -0.43
TVP23C-209ENST00000583206 DLG5Q8TDM6 1919 aa12.35□□□□□ -0.43
TVP23C-209ENST00000583206 USP17L8P0C7I0 530 aa12.35□□□□□ -0.43
TVP23C-209ENST00000583206 MKRN3Q13064 507 aaKnown RBP12.35□□□□□ -0.43
TVP23C-209ENST00000583206 LDLRAD1Q5T700 205 aa12.35□□□□□ -0.43
TVP23C-209ENST00000583206 INTS3Q68E01 1043 aaKnown RBP12.35□□□□□ -0.43
TVP23C-209ENST00000583206 TSPYL4Q9UJ04 414 aa12.35□□□□□ -0.43
TVP23C-209ENST00000583206 DDX60Q8IY21 1712 aaKnown RBP12.34□□□□□ -0.43
TVP23C-209ENST00000583206 KIAA0100Q14667 2235 aaKnown RBP12.34□□□□□ -0.43
TVP23C-209ENST00000583206 CAP1Q01518 475 aa12.34□□□□□ -0.43
TVP23C-209ENST00000583206 OTOP1Q7RTM1 612 aa12.34□□□□□ -0.43
TVP23C-209ENST00000583206 SEC31BQ9NQW1 1179 aa12.34□□□□□ -0.43
TVP23C-209ENST00000583206 BABAM1Q9NWV8 329 aa12.34□□□□□ -0.43
TVP23C-209ENST00000583206 WTIPA6NIX2 430 aaPredicted RBP12.33□□□□□ -0.44
TVP23C-209ENST00000583206 UFL1O94874 794 aa12.33□□□□□ -0.44
TVP23C-209ENST00000583206 EN2P19622 333 aaPredicted RBP12.33□□□□□ -0.44
TVP23C-209ENST00000583206 SREBF2Q12772 1141 aa12.33□□□□□ -0.44
TVP23C-209ENST00000583206 TRIM28Q13263 835 aaKnown RBP12.33□□□□□ -0.44
TVP23C-209ENST00000583206 SPRYD7Q5W111 196 aa12.33□□□□□ -0.44
TVP23C-209ENST00000583206 ARMC5Q96C12 935 aa12.33□□□□□ -0.44
TVP23C-209ENST00000583206 COLQQ9Y215 455 aaPredicted RBP12.33□□□□□ -0.44
TVP23C-209ENST00000583206 TRIM17Q9Y577 477 aa12.33□□□□□ -0.44
TVP23C-209ENST00000583206 COL6A3P12111 3177 aa12.32□□□□□ -0.44
TVP23C-209ENST00000583206 ATP5J2-PTCD1G3V325 749 aa12.32□□□□□ -0.44
TVP23C-209ENST00000583206 WNT10BO00744 389 aa12.32□□□□□ -0.44
TVP23C-209ENST00000583206 KRT24Q2M2I5 525 aa12.32□□□□□ -0.44
TVP23C-209ENST00000583206 ANKRD13DQ6ZTN6 518 aa12.32□□□□□ -0.44
TVP23C-209ENST00000583206 PODNQ7Z5L7 613 aa12.32□□□□□ -0.44
TVP23C-209ENST00000583206 PLBD2Q8NHP8 589 aa12.32□□□□□ -0.44
TVP23C-209ENST00000583206 GGA1Q9UJY5 639 aa12.32□□□□□ -0.44
TVP23C-209ENST00000583206 USP17L3A6NCW0 530 aa12.31□□□□□ -0.44
TVP23C-209ENST00000583206 USP17L4A6NCW7 530 aa12.31□□□□□ -0.44
TVP23C-209ENST00000583206 IRS4O14654 1257 aaPredicted RBP12.31□□□□□ -0.44
TVP23C-209ENST00000583206 RTL5Q5HYW3 569 aaPredicted RBP12.31□□□□□ -0.44
TVP23C-209ENST00000583206 USP17L1Q7RTZ2 530 aa12.31□□□□□ -0.44
TVP23C-209ENST00000583206 IFNL1Q8IU54 200 aa12.31□□□□□ -0.44
TVP23C-209ENST00000583206 MXD3Q9BW11 206 aa12.31□□□□□ -0.44
TVP23C-209ENST00000583206 PTPN22Q9Y2R2 807 aa12.31□□□□□ -0.44
TVP23C-209ENST00000583206 ALDH1A1P00352 501 aa12.3□□□□□ -0.44
TVP23C-209ENST00000583206 TTLL12Q14166 644 aaPredicted RBP12.3□□□□□ -0.44
TVP23C-209ENST00000583206 DACT2Q5SW24 774 aa12.3□□□□□ -0.44
TVP23C-209ENST00000583206 OTUD5Q96G74 571 aa12.3□□□□□ -0.44
TVP23C-209ENST00000583206 ZBED3Q96IU2 234 aaPredicted RBP12.3□□□□□ -0.44
TVP23C-209ENST00000583206 CHPF2Q9P2E5 772 aa12.3□□□□□ -0.44
TVP23C-209ENST00000583206 ANKIB1Q9P2G1 1089 aa12.3□□□□□ -0.44
TVP23C-209ENST00000583206 FZD1Q9UP38 647 aa12.3□□□□□ -0.44
TVP23C-209ENST00000583206 IGF2BP3O00425 579 aaKnown RBP eCLIP12.29□□□□□ -0.44
TVP23C-209ENST00000583206 INHBEP58166 350 aa12.29□□□□□ -0.44
TVP23C-209ENST00000583206 PSME4Q14997 1843 aa12.28□□□□□ -0.44
TVP23C-209ENST00000583206 G3V3G9 751 aa12.28□□□□□ -0.44
TVP23C-209ENST00000583206 CHL1O00533 1208 aa12.28□□□□□ -0.44
TVP23C-209ENST00000583206 NEFMP07197 916 aa12.28□□□□□ -0.44
TVP23C-209ENST00000583206 MAP3K11Q16584 847 aa12.28□□□□□ -0.44
TVP23C-209ENST00000583206 DCAF8Q5TAQ9 597 aa12.28□□□□□ -0.44
TVP23C-209ENST00000583206 RBBP6Q7Z6E9 1792 aaKnown RBP12.28□□□□□ -0.44
TVP23C-209ENST00000583206 TRIOBPQ9H2D6 2365 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms