RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	EIF5	P55010	431 aa	Known RBP	7.34	□□□□□ -1.23
MSI2-216	ENST00000582772	SMAD3	P84022	425 aa	Known RBP	7.34	□□□□□ -1.23
MSI2-216	ENST00000582772	AKNAD1	Q5T1N1	836 aa		7.34	□□□□□ -1.23
MSI2-216	ENST00000582772	TBC1D9B	Q66K14	1250 aa		7.34	□□□□□ -1.23
MSI2-216	ENST00000582772	NME9	Q86XW9	330 aa		7.34	□□□□□ -1.23
MSI2-216	ENST00000582772	MICALL2	Q8IY33	904 aa		7.34	□□□□□ -1.23
MSI2-216	ENST00000582772	C7orf61	Q8IZ16	206 aa		7.34	□□□□□ -1.23
MSI2-216	ENST00000582772	STAC3	Q96MF2	364 aa		7.34	□□□□□ -1.23
MSI2-216	ENST00000582772	DMXL1	Q9Y485	3027 aa		7.34	□□□□□ -1.23
MSI2-216	ENST00000582772	LTBP2	Q14767	1821 aa		7.34	□□□□□ -1.24
MSI2-216	ENST00000582772	LRRC37A2	A6NM11	1700 aa		7.33	□□□□□ -1.24
MSI2-216	ENST00000582772	MAP1B	P46821	2468 aa	Known RBP	7.33	□□□□□ -1.24
MSI2-216	ENST00000582772	SHTN1	A0MZ66	631 aa		7.33	□□□□□ -1.24
MSI2-216	ENST00000582772	SGPL1	O95470	568 aa		7.33	□□□□□ -1.24
MSI2-216	ENST00000582772	PHKG2	P15735	406 aa		7.33	□□□□□ -1.24
MSI2-216	ENST00000582772	ALDH1B1	P30837	517 aa		7.33	□□□□□ -1.24
MSI2-216	ENST00000582772	SPRYD7	Q5W111	196 aa		7.33	□□□□□ -1.24
MSI2-216	ENST00000582772	BCL2L13	Q9BXK5	485 aa		7.33	□□□□□ -1.24
MSI2-216	ENST00000582772	SPG7	Q9UQ90	795 aa		7.33	□□□□□ -1.24
MSI2-216	ENST00000582772	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	7.33	□□□□□ -1.24
MSI2-216	ENST00000582772	DDX60	Q8IY21	1712 aa	Known RBP	7.32	□□□□□ -1.24
MSI2-216	ENST00000582772	PTPRZ1	P23471	2315 aa	Predicted RBP	7.32	□□□□□ -1.24
MSI2-216	ENST00000582772	EGFR	P00533	1210 aa		7.32	□□□□□ -1.24
MSI2-216	ENST00000582772	ZBTB48	P10074	688 aa	Predicted RBP	7.32	□□□□□ -1.24
MSI2-216	ENST00000582772	TNIP1	Q15025	636 aa		7.32	□□□□□ -1.24
MSI2-216	ENST00000582772	IFNL2	Q8IZJ0	200 aa		7.32	□□□□□ -1.24
MSI2-216	ENST00000582772	EDC4	Q6P2E9	1401 aa	Known RBP	7.32	□□□□□ -1.24
MSI2-216	ENST00000582772	CENPJ	Q9HC77	1338 aa	Predicted RBP	7.31	□□□□□ -1.24
MSI2-216	ENST00000582772	CHD9	Q3L8U1	2897 aa		7.31	□□□□□ -1.24
MSI2-216	ENST00000582772	SYN1	P17600	705 aa		7.31	□□□□□ -1.24
MSI2-216	ENST00000582772	DDX60L	Q5H9U9	1706 aa	Known RBP	7.31	□□□□□ -1.24
MSI2-216	ENST00000582772	MOB2	Q70IA6	237 aa		7.31	□□□□□ -1.24
MSI2-216	ENST00000582772	PHOX2B	Q99453	314 aa		7.31	□□□□□ -1.24
MSI2-216	ENST00000582772	RNF208	Q9H0X6	261 aa		7.31	□□□□□ -1.24
MSI2-216	ENST00000582772	GGA3	Q9NZ52	723 aa		7.31	□□□□□ -1.24
MSI2-216	ENST00000582772	CXXC1	Q9P0U4	656 aa	Predicted RBP	7.31	□□□□□ -1.24
MSI2-216	ENST00000582772	FAM186A	A6NE01	2351 aa		7.3	□□□□□ -1.24
MSI2-216	ENST00000582772	UBE2Q2L	H0YL09	131 aa		7.3	□□□□□ -1.24
MSI2-216	ENST00000582772	PPIP5K2	O43314	1243 aa		7.3	□□□□□ -1.24
MSI2-216	ENST00000582772	MKRN3	Q13064	507 aa	Known RBP	7.3	□□□□□ -1.24
MSI2-216	ENST00000582772	TCIRG1	Q13488	830 aa		7.3	□□□□□ -1.24
MSI2-216	ENST00000582772	NECAB2	Q7Z6G3	386 aa		7.3	□□□□□ -1.24
MSI2-216	ENST00000582772	ANKLE1	Q8NAG6	615 aa		7.3	□□□□□ -1.24
MSI2-216	ENST00000582772	KHSRP	Q92945	711 aa	Known RBP eCLIP	7.3	□□□□□ -1.24
MSI2-216	ENST00000582772	CRISPLD2	Q9H0B8	497 aa		7.3	□□□□□ -1.24
MSI2-216	ENST00000582772	MAST2	Q6P0Q8	1798 aa		7.3	□□□□□ -1.24
MSI2-216	ENST00000582772	VPS13A	Q96RL7	3174 aa		7.29	□□□□□ -1.24
MSI2-216	ENST00000582772	GCN1	Q92616	2671 aa	Known RBP	7.29	□□□□□ -1.24
MSI2-216	ENST00000582772	PTCD1	O75127	700 aa	Known RBP	7.29	□□□□□ -1.24
MSI2-216	ENST00000582772	CYP19A1	P11511	503 aa	Predicted RBP	7.29	□□□□□ -1.24
MSI2-216	ENST00000582772	GRK4	P32298	578 aa		7.29	□□□□□ -1.24
MSI2-216	ENST00000582772	AMPH	P49418	695 aa		7.29	□□□□□ -1.24
MSI2-216	ENST00000582772	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	7.29	□□□□□ -1.24
MSI2-216	ENST00000582772	OTUD7B	Q6GQQ9	843 aa		7.29	□□□□□ -1.24
MSI2-216	ENST00000582772	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	7.29	□□□□□ -1.24	2e-6	■■■■□ 20.2
MSI2-216	ENST00000582772	PAWR	Q96IZ0	340 aa	Known RBP	7.29	□□□□□ -1.24
MSI2-216	ENST00000582772	CNTNAP3B	Q96NU0	1288 aa		7.29	□□□□□ -1.24
MSI2-216	ENST00000582772	CNTNAP3	Q9BZ76	1288 aa		7.29	□□□□□ -1.24
MSI2-216	ENST00000582772	CHD7	Q9P2D1	2997 aa		7.29	□□□□□ -1.24
MSI2-216	ENST00000582772	ZBTB1	Q9Y2K1	713 aa		7.29	□□□□□ -1.24
MSI2-216	ENST00000582772	RIF1	Q5UIP0	2472 aa	Known RBP	7.29	□□□□□ -1.24
MSI2-216	ENST00000582772	TRIO	O75962	3097 aa		7.28	□□□□□ -1.24
MSI2-216	ENST00000582772	TESPA1	A2RU30	521 aa	Predicted RBP	7.28	□□□□□ -1.24
MSI2-216	ENST00000582772	GFRA3	O60609	400 aa		7.28	□□□□□ -1.24
MSI2-216	ENST00000582772	AOC3	Q16853	763 aa		7.28	□□□□□ -1.24
MSI2-216	ENST00000582772	AAK1	Q2M2I8	961 aa		7.28	□□□□□ -1.24
MSI2-216	ENST00000582772	CRY2	Q49AN0	593 aa		7.28	□□□□□ -1.24
MSI2-216	ENST00000582772	LDLRAD1	Q5T700	205 aa		7.28	□□□□□ -1.24
MSI2-216	ENST00000582772	RTFDC1	Q9BY42	306 aa	Predicted RBP	7.28	□□□□□ -1.24
MSI2-216	ENST00000582772	UBR2	Q8IWV8	1755 aa		7.28	□□□□□ -1.24
MSI2-216	ENST00000582772	CACNA1H	O95180	2353 aa		7.27	□□□□□ -1.24
MSI2-216	ENST00000582772	RPS12	P25398	132 aa	Known RBP	7.27	□□□□□ -1.25
MSI2-216	ENST00000582772	UBXN2A	P68543	259 aa		7.27	□□□□□ -1.25
MSI2-216	ENST00000582772	GRIN2C	Q14957	1233 aa		7.27	□□□□□ -1.25
MSI2-216	ENST00000582772	POTEE	Q6S8J3	1075 aa		7.27	□□□□□ -1.25
MSI2-216	ENST00000582772	PPP4R3CP	Q6ZMV5	832 aa		7.27	□□□□□ -1.25
MSI2-216	ENST00000582772	NECTIN2	Q92692	538 aa		7.27	□□□□□ -1.25
MSI2-216	ENST00000582772	SETDB2	Q96T68	719 aa		7.27	□□□□□ -1.25
MSI2-216	ENST00000582772	PLXNA3	P51805	1871 aa		7.27	□□□□□ -1.25
MSI2-216	ENST00000582772	GVINP1	Q7Z2Y8	2422 aa		7.27	□□□□□ -1.25
MSI2-216	ENST00000582772	PSME4	Q14997	1843 aa		7.27	□□□□□ -1.25
MSI2-216	ENST00000582772	EVC2	Q86UK5	1308 aa		7.27	□□□□□ -1.25
MSI2-216	ENST00000582772	ADGRA2	Q96PE1	1338 aa		7.27	□□□□□ -1.25
MSI2-216	ENST00000582772		A0A087WZG4	1122 aa		7.26	□□□□□ -1.25
MSI2-216	ENST00000582772	MED19	A0JLT2	244 aa	Predicted RBP	7.26	□□□□□ -1.25
MSI2-216	ENST00000582772	PRAMEF22	A3QJZ6	481 aa		7.26	□□□□□ -1.25
MSI2-216	ENST00000582772	ECM2	O94769	699 aa	Predicted RBP	7.26	□□□□□ -1.25
MSI2-216	ENST00000582772	ID4	P47928	161 aa		7.26	□□□□□ -1.25
MSI2-216	ENST00000582772	LACTB	P83111	547 aa	Predicted RBP	7.26	□□□□□ -1.25
MSI2-216	ENST00000582772	PTPN12	Q05209	780 aa	Known RBP	7.26	□□□□□ -1.25
MSI2-216	ENST00000582772	KIF4B	Q2VIQ3	1234 aa		7.26	□□□□□ -1.25
MSI2-216	ENST00000582772	DNAJC10	Q8IXB1	793 aa		7.26	□□□□□ -1.25
MSI2-216	ENST00000582772	PAK6	Q9NQU5	681 aa	Predicted RBP	7.26	□□□□□ -1.25
MSI2-216	ENST00000582772	RIPOR2	Q9Y4F9	1068 aa		7.26	□□□□□ -1.25
MSI2-216	ENST00000582772	MGAM	O43451	1857 aa		7.26	□□□□□ -1.25
MSI2-216	ENST00000582772	ATRNL1	Q5VV63	1379 aa		7.25	□□□□□ -1.25
MSI2-216	ENST00000582772	RAD17	O75943	681 aa		7.25	□□□□□ -1.25
MSI2-216	ENST00000582772	KIAA2012	Q0VF49	1180 aa		7.25	□□□□□ -1.25
MSI2-216	ENST00000582772	DIS3L	Q8TF46	1054 aa	Known RBP	7.25	□□□□□ -1.25
MSI2-216	ENST00000582772	PTPN18	Q99952	460 aa		7.25	□□□□□ -1.25

Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms