RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 ANKRD1Q15327 319 aa16.26■□□□□ 0.19
SRSF1-205ENST00000582730 HLFQ16534 295 aa16.26■□□□□ 0.19
SRSF1-205ENST00000582730 NEK1Q96PY6 1258 aa16.26■□□□□ 0.19
SRSF1-205ENST00000582730 LRRC2Q9BYS8 371 aa16.26■□□□□ 0.19
SRSF1-205ENST00000582730 IFIT5Q13325 482 aaKnown RBP16.25■□□□□ 0.19
SRSF1-205ENST00000582730 LARP1BQ659C4 914 aaKnown RBP16.25■□□□□ 0.19
SRSF1-205ENST00000582730 FERMT3Q86UX7 667 aa16.25■□□□□ 0.19
SRSF1-205ENST00000582730 SYAP1Q96A49 352 aaPredicted RBP16.25■□□□□ 0.19
SRSF1-205ENST00000582730 ATP6V1DQ9Y5K8 247 aa16.25■□□□□ 0.19
SRSF1-205ENST00000582730 U3KPZ7 1027 aaPredicted RBP16.25■□□□□ 0.19
SRSF1-205ENST00000582730 TOGARAM1Q9Y4F4 1720 aa16.25■□□□□ 0.19
SRSF1-205ENST00000582730 NUP188Q5SRE5 1749 aa16.25■□□□□ 0.19
SRSF1-205ENST00000582730 TTC39AQ5SRH9 613 aa16.25■□□□□ 0.19
SRSF1-205ENST00000582730 KRT32Q14532 448 aa16.25■□□□□ 0.19
SRSF1-205ENST00000582730 ZBTB1Q9Y2K1 713 aa16.25■□□□□ 0.19
SRSF1-205ENST00000582730 R3HCC1Q9Y3T6 440 aaKnown RBP16.25■□□□□ 0.19
SRSF1-205ENST00000582730 CYP21A2P08686 494 aa16.24■□□□□ 0.19
SRSF1-205ENST00000582730 ADORA1P30542 326 aa16.24■□□□□ 0.19
SRSF1-205ENST00000582730 DNM1Q05193 864 aaKnown RBP16.24■□□□□ 0.19
SRSF1-205ENST00000582730 LRSAM1Q6UWE0 723 aa16.24■□□□□ 0.19
SRSF1-205ENST00000582730 MTMR6Q9Y217 621 aa16.24■□□□□ 0.19
SRSF1-205ENST00000582730 MAP3K15Q6ZN16 1313 aa16.24■□□□□ 0.19
SRSF1-205ENST00000582730 PAPPAQ13219 1627 aa16.24■□□□□ 0.19
SRSF1-205ENST00000582730 TJP1Q07157 1748 aa16.24■□□□□ 0.19
SRSF1-205ENST00000582730 TERF1P54274 439 aa16.24■□□□□ 0.19
SRSF1-205ENST00000582730 TOB2Q14106 344 aaPredicted RBP16.24■□□□□ 0.19
SRSF1-205ENST00000582730 CCDC158Q5M9N0 1113 aa16.24■□□□□ 0.19
SRSF1-205ENST00000582730 GPR108Q9NPR9 543 aa16.24■□□□□ 0.19
SRSF1-205ENST00000582730 TBC1D2BQ9UPU7 963 aa16.24■□□□□ 0.19
SRSF1-205ENST00000582730 CIAO1O76071 339 aa16.23■□□□□ 0.19
SRSF1-205ENST00000582730 PCCAP05165 728 aaPredicted RBP16.23■□□□□ 0.19
SRSF1-205ENST00000582730 NAP1L2Q9ULW6 460 aaPredicted RBP16.23■□□□□ 0.19
SRSF1-205ENST00000582730 NHSL1Q5SYE7 1610 aa16.23■□□□□ 0.19
SRSF1-205ENST00000582730 GIGYF2Q6Y7W6 1299 aaKnown RBP16.23■□□□□ 0.19
SRSF1-205ENST00000582730 ZBTB38Q8NAP3 1195 aaPredicted RBP16.23■□□□□ 0.19
SRSF1-205ENST00000582730 FAM177BA6PVY3 158 aa16.23■□□□□ 0.19
SRSF1-205ENST00000582730 Q6ZUG5 572 aa16.23■□□□□ 0.19
SRSF1-205ENST00000582730 XAGE2Q96GT9 111 aa16.23■□□□□ 0.19
SRSF1-205ENST00000582730 SLC4A9Q96Q91 983 aa16.23■□□□□ 0.19
SRSF1-205ENST00000582730 FAM13BQ9NYF5 915 aa16.23■□□□□ 0.19
SRSF1-205ENST00000582730 WASHC4Q2M389 1173 aa16.22■□□□□ 0.19
SRSF1-205ENST00000582730 METTL24Q5JXM2 366 aa16.22■□□□□ 0.19
SRSF1-205ENST00000582730 USPL1Q5W0Q7 1092 aa16.22■□□□□ 0.19
SRSF1-205ENST00000582730 TRMT112Q9UI30 125 aaKnown RBP16.22■□□□□ 0.19
SRSF1-205ENST00000582730 TCHHQ07283 1943 aa16.22■□□□□ 0.19
SRSF1-205ENST00000582730 RFX7Q2KHR2 1363 aa16.22■□□□□ 0.19
SRSF1-205ENST00000582730 HS1BP3Q53T59 392 aa16.22■□□□□ 0.19
SRSF1-205ENST00000582730 HSP90AB3PQ58FF7 597 aa16.22■□□□□ 0.19
SRSF1-205ENST00000582730 NOL7Q9UMY1 257 aaKnown RBP16.22■□□□□ 0.19
SRSF1-205ENST00000582730 AKAP2Q9Y2D5 859 aa16.22■□□□□ 0.19
SRSF1-205ENST00000582730 SH3TC1Q8TE82 1336 aa16.21■□□□□ 0.19
SRSF1-205ENST00000582730 LDHAL6AQ6ZMR3 332 aa16.21■□□□□ 0.19
SRSF1-205ENST00000582730 CNNM1Q9NRU3 951 aa16.21■□□□□ 0.19
SRSF1-205ENST00000582730 JCADQ9P266 1359 aa16.21■□□□□ 0.19
SRSF1-205ENST00000582730 CYP19A1P11511 503 aaPredicted RBP16.21■□□□□ 0.19
SRSF1-205ENST00000582730 CDC37L1Q7L3B6 337 aa16.21■□□□□ 0.19
SRSF1-205ENST00000582730 NLRP10Q86W26 655 aa16.21■□□□□ 0.19
SRSF1-205ENST00000582730 BRF1Q92994 677 aa16.21■□□□□ 0.19
SRSF1-205ENST00000582730 ACSBG1Q96GR2 724 aa16.21■□□□□ 0.19
SRSF1-205ENST00000582730 GREM2Q9H772 168 aa16.21■□□□□ 0.19
SRSF1-205ENST00000582730 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.21■□□□□ 0.19
SRSF1-205ENST00000582730 TRIM28Q13263 835 aaKnown RBP16.21■□□□□ 0.18
SRSF1-205ENST00000582730 FAM173BQ6P4H8 233 aa16.21■□□□□ 0.18
SRSF1-205ENST00000582730 HELLSQ9NRZ9 838 aa16.21■□□□□ 0.18
SRSF1-205ENST00000582730 PALLDQ8WX93 1383 aa16.2■□□□□ 0.18
SRSF1-205ENST00000582730 MAST3O60307 1309 aa16.2■□□□□ 0.18
SRSF1-205ENST00000582730 RNF113AO15541 343 aaKnown RBP16.2■□□□□ 0.18
SRSF1-205ENST00000582730 ITGA6P23229 1130 aa16.2■□□□□ 0.18
SRSF1-205ENST00000582730 TSGA10IPQ3SY00 556 aa16.2■□□□□ 0.18
SRSF1-205ENST00000582730 IRS4O14654 1257 aaPredicted RBP16.2■□□□□ 0.18
SRSF1-205ENST00000582730 ZNF500O60304 480 aaPredicted RBP16.2■□□□□ 0.18
SRSF1-205ENST00000582730 ZMYM1Q5SVZ6 1142 aa16.2■□□□□ 0.18
SRSF1-205ENST00000582730 PI16Q6UXB8 463 aa16.2■□□□□ 0.18
SRSF1-205ENST00000582730 DZIP3Q86Y13 1208 aaKnown RBP16.2■□□□□ 0.18
SRSF1-205ENST00000582730 DDX11Q96FC9 970 aa16.2■□□□□ 0.18
SRSF1-205ENST00000582730 PDLIM2Q96JY6 352 aa16.2■□□□□ 0.18
SRSF1-205ENST00000582730 A0A0G2JLW4 131 aa16.19■□□□□ 0.18
SRSF1-205ENST00000582730 NUTM2BA6NNL0 878 aaPredicted RBP16.19■□□□□ 0.18
SRSF1-205ENST00000582730 NUTM2EB1AL46 878 aaPredicted RBP16.19■□□□□ 0.18
SRSF1-205ENST00000582730 JAK2O60674 1132 aa16.19■□□□□ 0.18
SRSF1-205ENST00000582730 PHF14O94880 888 aa16.19■□□□□ 0.18
SRSF1-205ENST00000582730 PDCP20941 246 aa16.19■□□□□ 0.18
SRSF1-205ENST00000582730 FOSBP53539 338 aa16.19■□□□□ 0.18
SRSF1-205ENST00000582730 STOX1Q6ZVD7 989 aa16.19■□□□□ 0.18
SRSF1-205ENST00000582730 NUTM2AQ8IVF1 878 aaPredicted RBP16.19■□□□□ 0.18
SRSF1-205ENST00000582730 TSPY26PQ9H489 355 aa16.19■□□□□ 0.18
SRSF1-205ENST00000582730 BCL9O00512 1426 aa16.19■□□□□ 0.18
SRSF1-205ENST00000582730 SCARF1Q14162 830 aa16.19■□□□□ 0.18
SRSF1-205ENST00000582730 ATP2B3Q16720 1220 aa16.19■□□□□ 0.18
SRSF1-205ENST00000582730 M0R2C6 588 aa16.19■□□□□ 0.18
SRSF1-205ENST00000582730 HSPD1P10809 573 aaKnown RBP16.19■□□□□ 0.18
SRSF1-205ENST00000582730 UBE2HP62256 183 aa16.19■□□□□ 0.18
SRSF1-205ENST00000582730 ANKRD18BA2A2Z9 1011 aa16.18■□□□□ 0.18
SRSF1-205ENST00000582730 ZAP70P43403 619 aa16.18■□□□□ 0.18
SRSF1-205ENST00000582730 CSPP1Q1MSJ5 1256 aa16.18■□□□□ 0.18
SRSF1-205ENST00000582730 CHST3Q7LGC8 479 aa16.18■□□□□ 0.18
SRSF1-205ENST00000582730 TTLL5Q6EMB2 1281 aa16.18■□□□□ 0.18
SRSF1-205ENST00000582730 TMEM87AQ8NBN3 555 aa16.18■□□□□ 0.18
SRSF1-205ENST00000582730 TTLL11Q8NHH1 800 aa16.18■□□□□ 0.18
SRSF1-205ENST00000582730 PPFIA3O75145 1194 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms