RNA–Protein interactions for RNA: ENST00000582717.5

GGA3-214, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2 BASIC

Gene GGA3, Length 2,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-214ENST00000582717 RUFY3Q7L099 469 aa16.16■□□□□ 0.18
GGA3-214ENST00000582717 ZSCAN31Q96LW9 406 aaPredicted RBP16.16■□□□□ 0.18
GGA3-214ENST00000582717 NDUFB9Q9Y6M9 179 aa16.16■□□□□ 0.18
GGA3-214ENST00000582717 SPATA31A1Q5TZJ5 1347 aa16.16■□□□□ 0.18
GGA3-214ENST00000582717 LRRC24Q50LG9 513 aa16.16■□□□□ 0.18
GGA3-214ENST00000582717 SH2B1Q9NRF2 756 aaPredicted RBP16.16■□□□□ 0.18
GGA3-214ENST00000582717 SNRKQ9NRH2 765 aa16.16■□□□□ 0.18
GGA3-214ENST00000582717 MAP3K15Q6ZN16 1313 aa16.16■□□□□ 0.18
GGA3-214ENST00000582717 FIBPO43427 364 aa16.15■□□□□ 0.18
GGA3-214ENST00000582717 CHAF1AQ13111 956 aaPredicted RBP16.15■□□□□ 0.18
GGA3-214ENST00000582717 TRIM28Q13263 835 aaKnown RBP16.15■□□□□ 0.18
GGA3-214ENST00000582717 PRPF40BQ6NWY9 871 aaKnown RBP16.15■□□□□ 0.18
GGA3-214ENST00000582717 MED23Q9ULK4 1368 aa16.15■□□□□ 0.18
GGA3-214ENST00000582717 ANKRD36CQ5JPF3 1778 aa16.15■□□□□ 0.18
GGA3-214ENST00000582717 HLFQ16534 295 aa16.15■□□□□ 0.18
GGA3-214ENST00000582717 ZNF710Q8N1W2 664 aa16.15■□□□□ 0.18
GGA3-214ENST00000582717 KIAA1524Q8TCG1 905 aa16.15■□□□□ 0.18
GGA3-214ENST00000582717 KCNB2Q92953 911 aa16.15■□□□□ 0.18
GGA3-214ENST00000582717 ZBTB1Q9Y2K1 713 aa16.15■□□□□ 0.18
GGA3-214ENST00000582717 EYA2O00167 538 aa16.14■□□□□ 0.17
GGA3-214ENST00000582717 CPA1P15085 419 aa16.14■□□□□ 0.17
GGA3-214ENST00000582717 NECTIN1Q15223 517 aa16.14■□□□□ 0.17
GGA3-214ENST00000582717 TM6SF1Q9BZW5 370 aa16.14■□□□□ 0.17
GGA3-214ENST00000582717 CCDC9Q9Y3X0 531 aaKnown RBP16.14■□□□□ 0.17
GGA3-214ENST00000582717 RBM8AQ9Y5S9 174 aaKnown RBP16.14■□□□□ 0.17
GGA3-214ENST00000582717 ZNF609O15014 1411 aa16.14■□□□□ 0.17
GGA3-214ENST00000582717 PCCAP05165 728 aaPredicted RBP16.14■□□□□ 0.17
GGA3-214ENST00000582717 CCDC192P0DO97 292 aa16.14■□□□□ 0.17
GGA3-214ENST00000582717 IL15P40933 162 aaPredicted RBP16.14■□□□□ 0.17
GGA3-214ENST00000582717 VPS53Q5VIR6 699 aa16.14■□□□□ 0.17
GGA3-214ENST00000582717 GIGYF2Q6Y7W6 1299 aaKnown RBP16.14■□□□□ 0.17
GGA3-214ENST00000582717 FAM89AQ96GI7 184 aa16.14■□□□□ 0.17
GGA3-214ENST00000582717 PUS3Q9BZE2 481 aaKnown RBP16.14■□□□□ 0.17
GGA3-214ENST00000582717 CASTP20810 708 aaKnown RBP16.13■□□□□ 0.17
GGA3-214ENST00000582717 ADCK5Q3MIX3 580 aa16.13■□□□□ 0.17
GGA3-214ENST00000582717 ZNF589Q86UQ0 364 aaPredicted RBP16.13■□□□□ 0.17
GGA3-214ENST00000582717 MAP4K1Q92918 833 aa16.13■□□□□ 0.17
GGA3-214ENST00000582717 DNAJC2Q99543 621 aaKnown RBP16.13■□□□□ 0.17
GGA3-214ENST00000582717 HAUS7Q99871 368 aa16.13■□□□□ 0.17
GGA3-214ENST00000582717 MTMR6Q9Y217 621 aa16.13■□□□□ 0.17
GGA3-214ENST00000582717 NUTM2BA6NNL0 878 aaPredicted RBP16.12■□□□□ 0.17
GGA3-214ENST00000582717 NUTM2EB1AL46 878 aaPredicted RBP16.12■□□□□ 0.17
GGA3-214ENST00000582717 GPTP24298 496 aa16.12■□□□□ 0.17
GGA3-214ENST00000582717 NUTM2AQ8IVF1 878 aaPredicted RBP16.12■□□□□ 0.17
GGA3-214ENST00000582717 CDCA7Q9BWT1 371 aaPredicted RBP16.12■□□□□ 0.17
GGA3-214ENST00000582717 GPR108Q9NPR9 543 aa16.12■□□□□ 0.17
GGA3-214ENST00000582717 JCADQ9P266 1359 aa16.12■□□□□ 0.17
GGA3-214ENST00000582717 NUP98P52948 1817 aa16.12■□□□□ 0.17
GGA3-214ENST00000582717 CIAO1O76071 339 aa16.12■□□□□ 0.17
GGA3-214ENST00000582717 CHGBP05060 677 aa16.12■□□□□ 0.17
GGA3-214ENST00000582717 TIMM10P62072 90 aa16.12■□□□□ 0.17
GGA3-214ENST00000582717 DMTNQ08495 405 aa16.12■□□□□ 0.17
GGA3-214ENST00000582717 DDB1Q16531 1140 aa16.12■□□□□ 0.17
GGA3-214ENST00000582717 CREB3L3Q68CJ9 461 aa16.12■□□□□ 0.17
GGA3-214ENST00000582717 GIMAP6Q6P9H5 292 aa16.12■□□□□ 0.17
GGA3-214ENST00000582717 SYNE4Q8N205 404 aa16.12■□□□□ 0.17
GGA3-214ENST00000582717 MPNDQ8N594 471 aa16.12■□□□□ 0.17
GGA3-214ENST00000582717 JAKMIP1Q96N16 626 aaKnown RBP16.12■□□□□ 0.17
GGA3-214ENST00000582717 NEUROD6Q96NK8 337 aa16.12■□□□□ 0.17
GGA3-214ENST00000582717 GJB2P29033 226 aa16.11■□□□□ 0.17
GGA3-214ENST00000582717 ZBTB38Q8NAP3 1195 aaPredicted RBP16.11■□□□□ 0.17
GGA3-214ENST00000582717 CCDC85AQ96PX6 553 aaPredicted RBP16.11■□□□□ 0.17
GGA3-214ENST00000582717 PLA2G12BQ9BX93 195 aa16.11■□□□□ 0.17
GGA3-214ENST00000582717 RFX7Q2KHR2 1363 aa16.11■□□□□ 0.17
GGA3-214ENST00000582717 NLRP10Q86W26 655 aa16.11■□□□□ 0.17
GGA3-214ENST00000582717 C17orf53Q8N3J3 647 aaPredicted RBP16.11■□□□□ 0.17
GGA3-214ENST00000582717 LARP6Q9BRS8 491 aaKnown RBP16.11■□□□□ 0.17
GGA3-214ENST00000582717 THRAP3Q9Y2W1 955 aaKnown RBP16.11■□□□□ 0.17
GGA3-214ENST00000582717 DNM1Q05193 864 aaKnown RBP16.1■□□□□ 0.17
GGA3-214ENST00000582717 CCDC57Q2TAC2 916 aa16.1■□□□□ 0.17
GGA3-214ENST00000582717 DDX46Q7L014 1031 aaKnown RBP16.1■□□□□ 0.17
GGA3-214ENST00000582717 MARCH10Q8NA82 808 aaPredicted RBP16.1■□□□□ 0.17
GGA3-214ENST00000582717 ARID3AQ99856 593 aa16.1■□□□□ 0.17
GGA3-214ENST00000582717 PDRG1Q9NUG6 133 aa16.1■□□□□ 0.17
GGA3-214ENST00000582717 NWD2Q9ULI1 1742 aa16.1■□□□□ 0.17
GGA3-214ENST00000582717 SPATA31A5Q5VU36 1347 aa16.1■□□□□ 0.17
GGA3-214ENST00000582717 SPATA31A7Q8IWB4 1347 aa16.1■□□□□ 0.17
GGA3-214ENST00000582717 SLC27A2O14975 620 aa16.1■□□□□ 0.17
GGA3-214ENST00000582717 KCNJ4P48050 445 aa16.1■□□□□ 0.17
GGA3-214ENST00000582717 PIP4K2BP78356 416 aa16.1■□□□□ 0.17
GGA3-214ENST00000582717 FAM200AQ8TCP9 573 aa16.1■□□□□ 0.17
GGA3-214ENST00000582717 ACSBG1Q96GR2 724 aa16.1■□□□□ 0.17
GGA3-214ENST00000582717 BCL2L12Q9HB09 334 aa16.1■□□□□ 0.17
GGA3-214ENST00000582717 ZSWIM6Q9HCJ5 1215 aa16.1■□□□□ 0.17
GGA3-214ENST00000582717 CYP46A1Q9Y6A2 500 aa16.1■□□□□ 0.17
GGA3-214ENST00000582717 ELP1O95163 1332 aa16.09■□□□□ 0.17
GGA3-214ENST00000582717 CDHR2Q9BYE9 1310 aa16.09■□□□□ 0.17
GGA3-214ENST00000582717 A0A0G2JS52 829 aa16.09■□□□□ 0.17
GGA3-214ENST00000582717 A0A1B0GUL7 405 aa16.09■□□□□ 0.17
GGA3-214ENST00000582717 CSF1RP07333 972 aa16.09■□□□□ 0.17
GGA3-214ENST00000582717 CCDC83Q8IWF9 413 aa16.09■□□□□ 0.17
GGA3-214ENST00000582717 GTPBP4Q9BZE4 634 aaKnown RBP16.09■□□□□ 0.17
GGA3-214ENST00000582717 KCNF1Q9H3M0 494 aa16.09■□□□□ 0.17
GGA3-214ENST00000582717 MYH3P11055 1940 aa16.09■□□□□ 0.17
GGA3-214ENST00000582717 SLIT2O94813 1529 aa16.09■□□□□ 0.17
GGA3-214ENST00000582717 TAF5LO75529 589 aa16.08■□□□□ 0.17
GGA3-214ENST00000582717 PLCB2Q00722 1185 aa16.08■□□□□ 0.17
GGA3-214ENST00000582717 COL9A3Q14050 684 aaPredicted RBP16.08■□□□□ 0.17
GGA3-214ENST00000582717 SEC62Q99442 399 aaKnown RBP16.08■□□□□ 0.17
GGA3-214ENST00000582717 TAF6LQ9Y6J9 622 aa16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms