RNA–Protein interactions for RNA: ENST00000582376.1

GGA3-212, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-212ENST00000582376 PRAMEF18Q5VWM3 479 aa12.3□□□□□ -0.44
GGA3-212ENST00000582376 CD99L2Q8TCZ2 262 aa12.3□□□□□ -0.44
GGA3-212ENST00000582376 NECTIN2Q92692 538 aa12.3□□□□□ -0.44
GGA3-212ENST00000582376 ZNF333Q96JL9 665 aa12.3□□□□□ -0.44
GGA3-212ENST00000582376 POLLQ9UGP5 575 aa12.3□□□□□ -0.44
GGA3-212ENST00000582376 SCAF8Q9UPN6 1271 aaKnown RBP12.3□□□□□ -0.44
GGA3-212ENST00000582376 ANKRD36CQ5JPF3 1778 aa12.3□□□□□ -0.44
GGA3-212ENST00000582376 MKI67P46013 3256 aaKnown RBP12.29□□□□□ -0.44
GGA3-212ENST00000582376 LRRC37AA6NMS7 1700 aa12.29□□□□□ -0.44
GGA3-212ENST00000582376 CUL9Q8IWT3 2517 aa12.29□□□□□ -0.44
GGA3-212ENST00000582376 LAMB2P55268 1798 aa12.29□□□□□ -0.44
GGA3-212ENST00000582376 MANSC4A6NHS7 340 aaPredicted RBP12.29□□□□□ -0.44
GGA3-212ENST00000582376 INHBEP58166 350 aa12.29□□□□□ -0.44
GGA3-212ENST00000582376 PTPN12Q05209 780 aaKnown RBP12.29□□□□□ -0.44
GGA3-212ENST00000582376 TAF7Q15545 349 aaPredicted RBP12.29□□□□□ -0.44
GGA3-212ENST00000582376 SPRYD7Q5W111 196 aa12.29□□□□□ -0.44
GGA3-212ENST00000582376 ARMC9Q7Z3E5 817 aa12.29□□□□□ -0.44
GGA3-212ENST00000582376 IFNL1Q8IU54 200 aa12.29□□□□□ -0.44
GGA3-212ENST00000582376 AGBL3Q8NEM8 1001 aa12.29□□□□□ -0.44
GGA3-212ENST00000582376 MYOZ2Q9NPC6 264 aa12.29□□□□□ -0.44
GGA3-212ENST00000582376 CEP290O15078 2479 aa12.29□□□□□ -0.44
GGA3-212ENST00000582376 COL3A1P02461 1466 aaPredicted RBP12.28□□□□□ -0.44
GGA3-212ENST00000582376 G3V3G9 751 aa12.28□□□□□ -0.44
GGA3-212ENST00000582376 GPSM2P81274 684 aa12.28□□□□□ -0.44
GGA3-212ENST00000582376 DCTN1Q14203 1278 aa12.28□□□□□ -0.44
GGA3-212ENST00000582376 DCAF8Q5TAQ9 597 aa12.28□□□□□ -0.44
GGA3-212ENST00000582376 RSBN1LQ6PCB5 846 aaPredicted RBP12.28□□□□□ -0.44
GGA3-212ENST00000582376 NBPF11Q86T75 865 aa12.28□□□□□ -0.44
GGA3-212ENST00000582376 MIS18AQ9NYP9 233 aa12.28□□□□□ -0.44
GGA3-212ENST00000582376 USP17L8P0C7I0 530 aa12.27□□□□□ -0.45
GGA3-212ENST00000582376 ZC3H12CQ9C0D7 883 aaKnown RBP12.27□□□□□ -0.45
GGA3-212ENST00000582376 TAF1P21675 1872 aa12.26□□□□□ -0.45
GGA3-212ENST00000582376 HTATSF1O43719 755 aaKnown RBP12.26□□□□□ -0.45
GGA3-212ENST00000582376 PRKG1Q13976 671 aa12.26□□□□□ -0.45
GGA3-212ENST00000582376 SLC9C1Q4G0N8 1177 aa12.26□□□□□ -0.45
GGA3-212ENST00000582376 TBC1D16Q8TBP0 767 aa12.26□□□□□ -0.45
GGA3-212ENST00000582376 DPF3Q92784 378 aa12.26□□□□□ -0.45
GGA3-212ENST00000582376 RSPH6AQ9H0K4 717 aa12.26□□□□□ -0.45
GGA3-212ENST00000582376 SCN9AQ15858 1988 aa12.26□□□□□ -0.45
GGA3-212ENST00000582376 SH3TC1Q8TE82 1336 aa12.26□□□□□ -0.45
GGA3-212ENST00000582376 SZT2Q5T011 3432 aa12.25□□□□□ -0.45
GGA3-212ENST00000582376 IGF2BP3O00425 579 aaKnown RBP eCLIP12.25□□□□□ -0.45
GGA3-212ENST00000582376 SP3Q02447 781 aa12.25□□□□□ -0.45
GGA3-212ENST00000582376 NLRP10Q86W26 655 aa12.25□□□□□ -0.45
GGA3-212ENST00000582376 CELF1Q92879 486 aaKnown RBP12.25□□□□□ -0.45
GGA3-212ENST00000582376 TRMT112Q9UI30 125 aaKnown RBP12.25□□□□□ -0.45
GGA3-212ENST00000582376 ERBB4Q15303 1308 aa12.25□□□□□ -0.45
GGA3-212ENST00000582376 EIF4G2P78344 907 aaKnown RBP eCLIP12.24□□□□□ -0.45
GGA3-212ENST00000582376 CRHR2Q13324 411 aa12.24□□□□□ -0.45
GGA3-212ENST00000582376 ARHGEF6Q15052 776 aa12.24□□□□□ -0.45
GGA3-212ENST00000582376 NBPF9Q3BBW0 867 aa12.24□□□□□ -0.45
GGA3-212ENST00000582376 HSP90AB3PQ58FF7 597 aa12.24□□□□□ -0.45
GGA3-212ENST00000582376 CC2D1BQ5T0F9 858 aaKnown RBP12.24□□□□□ -0.45
GGA3-212ENST00000582376 LDLRAD1Q5T700 205 aa12.24□□□□□ -0.45
GGA3-212ENST00000582376 OTUD7BQ6GQQ9 843 aa12.24□□□□□ -0.45
GGA3-212ENST00000582376 PNISRQ8TF01 805 aaKnown RBP12.24□□□□□ -0.45
GGA3-212ENST00000582376 SLC10A4Q96EP9 437 aa12.24□□□□□ -0.45
GGA3-212ENST00000582376 GMLQ99445 158 aa12.24□□□□□ -0.45
GGA3-212ENST00000582376 PRO3102Q9H379 93 aa12.24□□□□□ -0.45
GGA3-212ENST00000582376 ANGEL1Q9UNK9 670 aaKnown RBP12.24□□□□□ -0.45
GGA3-212ENST00000582376 PTCH2Q9Y6C5 1203 aa12.24□□□□□ -0.45
GGA3-212ENST00000582376 MYCP01106 439 aaPredicted RBP12.23□□□□□ -0.45
GGA3-212ENST00000582376 ZBTB48P10074 688 aaPredicted RBP12.23□□□□□ -0.45
GGA3-212ENST00000582376 HSPA5P11021 654 aaKnown RBP12.23□□□□□ -0.45
GGA3-212ENST00000582376 EIF4A1P60842 406 aaKnown RBP12.23□□□□□ -0.45
GGA3-212ENST00000582376 KDM3BQ7LBC6 1761 aa12.23□□□□□ -0.45
GGA3-212ENST00000582376 A0A1W2PPC1 479 aa12.22□□□□□ -0.45
GGA3-212ENST00000582376 WTIPA6NIX2 430 aaPredicted RBP12.22□□□□□ -0.45
GGA3-212ENST00000582376 CAP1Q01518 475 aa12.22□□□□□ -0.45
GGA3-212ENST00000582376 WNK4Q96J92 1243 aa12.22□□□□□ -0.45
GGA3-212ENST00000582376 THUMPD2Q9BTF0 503 aaKnown RBP12.22□□□□□ -0.45
GGA3-212ENST00000582376 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.22□□□□□ -0.45
GGA3-212ENST00000582376 HTTP42858 3142 aa12.21□□□□□ -0.45
GGA3-212ENST00000582376 USP17L3A6NCW0 530 aa12.21□□□□□ -0.45
GGA3-212ENST00000582376 USP17L4A6NCW7 530 aa12.21□□□□□ -0.45
GGA3-212ENST00000582376 SOX1O00570 391 aaPredicted RBP12.21□□□□□ -0.45
GGA3-212ENST00000582376 UFL1O94874 794 aa12.21□□□□□ -0.45
GGA3-212ENST00000582376 SF3B3Q15393 1217 aaKnown RBP12.21□□□□□ -0.45
GGA3-212ENST00000582376 USP17L1Q7RTZ2 530 aa12.21□□□□□ -0.45
GGA3-212ENST00000582376 LRP10Q7Z4F1 713 aa12.21□□□□□ -0.45
GGA3-212ENST00000582376 LRCH3Q96II8 777 aa12.21□□□□□ -0.45
GGA3-212ENST00000582376 COL25A1Q9BXS0 654 aaPredicted RBP12.21□□□□□ -0.45
GGA3-212ENST00000582376 PODXL2Q9NZ53 605 aa12.21□□□□□ -0.45
GGA3-212ENST00000582376 WNT10BO00744 389 aa12.2□□□□□ -0.46
GGA3-212ENST00000582376 RPS8P62241 208 aaKnown RBP12.2□□□□□ -0.46
GGA3-212ENST00000582376 HTATIP2Q9BUP3 242 aa12.2□□□□□ -0.46
GGA3-212ENST00000582376 ANKIB1Q9P2G1 1089 aa12.2□□□□□ -0.46
GGA3-212ENST00000582376 GGA1Q9UJY5 639 aa12.2□□□□□ -0.46
GGA3-212ENST00000582376 NR2E3Q9Y5X4 410 aa12.2□□□□□ -0.46
GGA3-212ENST00000582376 PSME4Q14997 1843 aa12.19□□□□□ -0.46
GGA3-212ENST00000582376 PDIA6Q15084 440 aa12.19□□□□□ -0.46
GGA3-212ENST00000582376 MAP3K11Q16584 847 aa12.19□□□□□ -0.46
GGA3-212ENST00000582376 APOBEC3FQ8IUX4 373 aaKnown RBP12.19□□□□□ -0.46
GGA3-212ENST00000582376 OGFOD1Q8N543 542 aa12.19□□□□□ -0.46
GGA3-212ENST00000582376 CFAP53Q96M91 514 aa12.19□□□□□ -0.46
GGA3-212ENST00000582376 FZD1Q9UP38 647 aa12.19□□□□□ -0.46
GGA3-212ENST00000582376 NUDCQ9Y266 331 aa12.19□□□□□ -0.46
GGA3-212ENST00000582376 U2AF1L5P0DN76 240 aaPredicted RBP12.18□□□□□ -0.46
GGA3-212ENST00000582376 U2AF1Q01081 240 aaKnown RBP eCLIP12.18□□□□□ -0.46
GGA3-212ENST00000582376 ANKRD13DQ6ZTN6 518 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms