RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 RFC4P35249 363 aa27.24■■□□□ 1.95
CCDC47-204ENST00000582252 KCNB2Q92953 911 aa27.24■■□□□ 1.95
CCDC47-204ENST00000582252 INTS4Q96HW7 963 aaKnown RBP27.24■■□□□ 1.95
CCDC47-204ENST00000582252 ZNF594Q96JF6 807 aaPredicted RBP27.24■■□□□ 1.95
CCDC47-204ENST00000582252 UBN2Q6ZU65 1347 aa27.23■■□□□ 1.95
CCDC47-204ENST00000582252 MED23Q9ULK4 1368 aa27.23■■□□□ 1.95
CCDC47-204ENST00000582252 PHF14O94880 888 aa27.23■■□□□ 1.95
CCDC47-204ENST00000582252 KCNJ4P48050 445 aa27.23■■□□□ 1.95
CCDC47-204ENST00000582252 CUL4AQ13619 759 aa27.23■■□□□ 1.95
CCDC47-204ENST00000582252 LRRC24Q50LG9 513 aa27.23■■□□□ 1.95
CCDC47-204ENST00000582252 FAM227BQ96M60 508 aa27.23■■□□□ 1.95
CCDC47-204ENST00000582252 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.22■■□□□ 1.95
CCDC47-204ENST00000582252 SMIM5Q71RC9 77 aa27.22■■□□□ 1.95
CCDC47-204ENST00000582252 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.22■■□□□ 1.95
CCDC47-204ENST00000582252 DNAJC2Q99543 621 aaKnown RBP27.22■■□□□ 1.95
CCDC47-204ENST00000582252 TM6SF1Q9BZW5 370 aa27.22■■□□□ 1.95
CCDC47-204ENST00000582252 TRMT112Q9UI30 125 aaKnown RBP27.22■■□□□ 1.95
CCDC47-204ENST00000582252 NIP7Q9Y221 180 aaKnown RBP eCLIP27.22■■□□□ 1.95
CCDC47-204ENST00000582252 PTH1RQ03431 593 aa27.21■■□□□ 1.95
CCDC47-204ENST00000582252 RNF20Q5VTR2 975 aa27.21■■□□□ 1.95
CCDC47-204ENST00000582252 USPL1Q5W0Q7 1092 aa27.21■■□□□ 1.95
CCDC47-204ENST00000582252 MAP4K1Q92918 833 aa27.21■■□□□ 1.95
CCDC47-204ENST00000582252 UPF3BQ9BZI7 483 aaKnown RBP27.21■■□□□ 1.95
CCDC47-204ENST00000582252 GOLGA6L22H0YM25 854 aa27.21■■□□□ 1.95
CCDC47-204ENST00000582252 CTSWP56202 376 aa27.21■■□□□ 1.95
CCDC47-204ENST00000582252 COL24A1Q17RW2 1714 aa27.21■■□□□ 1.95
CCDC47-204ENST00000582252 A0A0D9SFI3 127 aa27.2■■□□□ 1.94
CCDC47-204ENST00000582252 A0A1B0GUL7 405 aa27.2■■□□□ 1.94
CCDC47-204ENST00000582252 IRS4O14654 1257 aaPredicted RBP27.2■■□□□ 1.94
CCDC47-204ENST00000582252 PDE8AO60658 829 aa27.2■■□□□ 1.94
CCDC47-204ENST00000582252 BAG6P46379 1132 aa27.2■■□□□ 1.94
CCDC47-204ENST00000582252 CLEC17AQ6ZS10 378 aa27.2■■□□□ 1.94
CCDC47-204ENST00000582252 CAMKK2Q96RR4 588 aa27.2■■□□□ 1.94
CCDC47-204ENST00000582252 SRP68Q9UHB9 627 aaKnown RBP27.2■■□□□ 1.94
CCDC47-204ENST00000582252 ANKRD18BA2A2Z9 1011 aa27.19■■□□□ 1.94
CCDC47-204ENST00000582252 NECTIN1Q15223 517 aa27.19■■□□□ 1.94
CCDC47-204ENST00000582252 PRPF40BQ6NWY9 871 aaKnown RBP27.19■■□□□ 1.94
CCDC47-204ENST00000582252 KBTBD3Q8NAB2 608 aa27.19■■□□□ 1.94
CCDC47-204ENST00000582252 AKT1S1Q96B36 256 aa27.19■■□□□ 1.94
CCDC47-204ENST00000582252 BCL2L12Q9HB09 334 aa27.19■■□□□ 1.94
CCDC47-204ENST00000582252 RBM8AQ9Y5S9 174 aaKnown RBP27.19■■□□□ 1.94
CCDC47-204ENST00000582252 LAMB2P55268 1798 aa27.19■■□□□ 1.94
CCDC47-204ENST00000582252 EN1Q05925 392 aaPredicted RBP27.19■■□□□ 1.94
CCDC47-204ENST00000582252 HSP90B1P14625 803 aaKnown RBP27.18■■□□□ 1.94
CCDC47-204ENST00000582252 TIMM10P62072 90 aa27.18■■□□□ 1.94
CCDC47-204ENST00000582252 RASEFQ8IZ41 740 aa27.18■■□□□ 1.94
CCDC47-204ENST00000582252 TTLL11Q8NHH1 800 aa27.18■■□□□ 1.94
CCDC47-204ENST00000582252 PUS3Q9BZE2 481 aaKnown RBP27.18■■□□□ 1.94
CCDC47-204ENST00000582252 PSMA5P28066 241 aa27.17■■□□□ 1.94
CCDC47-204ENST00000582252 LRRFIP1Q32MZ4 808 aaKnown RBP27.17■■□□□ 1.94
CCDC47-204ENST00000582252 CCDC158Q5M9N0 1113 aa27.17■■□□□ 1.94
CCDC47-204ENST00000582252 CCDC125Q86Z20 511 aa27.17■■□□□ 1.94
CCDC47-204ENST00000582252 UTP14AQ9BVJ6 771 aaKnown RBP27.17■■□□□ 1.94
CCDC47-204ENST00000582252 PAG1Q9NWQ8 432 aa27.17■■□□□ 1.94
CCDC47-204ENST00000582252 TFCP2L1Q9NZI6 479 aa27.17■■□□□ 1.94
CCDC47-204ENST00000582252 HMG20BQ9P0W2 317 aa27.17■■□□□ 1.94
CCDC47-204ENST00000582252 IFIT1P09914 478 aaKnown RBP27.16■■□□□ 1.94
CCDC47-204ENST00000582252 EZH2Q15910 746 aaKnown RBP27.16■■□□□ 1.94
CCDC47-204ENST00000582252 ZNF827Q17R98 1081 aa27.16■■□□□ 1.94
CCDC47-204ENST00000582252 SUSD4Q5VX71 490 aa27.16■■□□□ 1.94
CCDC47-204ENST00000582252 CREB3L3Q68CJ9 461 aa27.16■■□□□ 1.94
CCDC47-204ENST00000582252 ZGPATQ8N5A5 531 aaKnown RBP27.16■■□□□ 1.94
CCDC47-204ENST00000582252 TTC14Q96N46 770 aa27.16■■□□□ 1.94
CCDC47-204ENST00000582252 QSER1Q2KHR3 1735 aa27.16■■□□□ 1.94
CCDC47-204ENST00000582252 CYP2E1P05181 493 aaPredicted RBP27.16■■□□□ 1.94
CCDC47-204ENST00000582252 CASTP20810 708 aaKnown RBP27.16■■□□□ 1.94
CCDC47-204ENST00000582252 ITGA6P23229 1130 aa27.16■■□□□ 1.94
CCDC47-204ENST00000582252 GORABQ5T7V8 394 aa27.16■■□□□ 1.94
CCDC47-204ENST00000582252 CYP46A1Q9Y6A2 500 aa27.16■■□□□ 1.94
CCDC47-204ENST00000582252 SH3TC1Q8TE82 1336 aa27.16■■□□□ 1.94
CCDC47-204ENST00000582252 SKOR2Q2VWA4 1001 aaPredicted RBP27.15■■□□□ 1.94
CCDC47-204ENST00000582252 FLAD1Q8NFF5 587 aa27.15■■□□□ 1.94
CCDC47-204ENST00000582252 EDC3Q96F86 508 aaKnown RBP27.15■■□□□ 1.94
CCDC47-204ENST00000582252 ABCC12Q96J65 1359 aa27.15■■□□□ 1.94
CCDC47-204ENST00000582252 TRAK2O60296 914 aa27.14■■□□□ 1.94
CCDC47-204ENST00000582252 MCMDC2Q4G0Z9 681 aa27.14■■□□□ 1.94
CCDC47-204ENST00000582252 VPS53Q5VIR6 699 aa27.14■■□□□ 1.94
CCDC47-204ENST00000582252 TBC1D9BQ66K14 1250 aa27.14■■□□□ 1.94
CCDC47-204ENST00000582252 DDX60Q8IY21 1712 aaKnown RBP27.14■■□□□ 1.94
CCDC47-204ENST00000582252 JAKMIP1Q96N16 626 aaKnown RBP27.14■■□□□ 1.94
CCDC47-204ENST00000582252 TTC39AQ5SRH9 613 aa27.13■■□□□ 1.93
CCDC47-204ENST00000582252 DDX46Q7L014 1031 aaKnown RBP27.13■■□□□ 1.93
CCDC47-204ENST00000582252 CCDC85AQ96PX6 553 aaPredicted RBP27.13■■□□□ 1.93
CCDC47-204ENST00000582252 SETDB2Q96T68 719 aa27.13■■□□□ 1.93
CCDC47-204ENST00000582252 ZSWIM6Q9HCJ5 1215 aa27.13■■□□□ 1.93
CCDC47-204ENST00000582252 LIMCH1Q9UPQ0 1083 aa27.13■■□□□ 1.93
CCDC47-204ENST00000582252 NTSR2O95665 410 aa27.13■■□□□ 1.93
CCDC47-204ENST00000582252 METTL24Q5JXM2 366 aa27.13■■□□□ 1.93
CCDC47-204ENST00000582252 LDHAL6AQ6ZMR3 332 aa27.13■■□□□ 1.93
CCDC47-204ENST00000582252 NOL8Q76FK4 1167 aaKnown RBP27.13■■□□□ 1.93
CCDC47-204ENST00000582252 GREM2Q9H772 168 aa27.13■■□□□ 1.93
CCDC47-204ENST00000582252 HELLSQ9NRZ9 838 aa27.13■■□□□ 1.93
CCDC47-204ENST00000582252 GOLIM4O00461 696 aa27.12■■□□□ 1.93
CCDC47-204ENST00000582252 SLC27A2O14975 620 aa27.12■■□□□ 1.93
CCDC47-204ENST00000582252 CNNM1Q9NRU3 951 aa27.12■■□□□ 1.93
CCDC47-204ENST00000582252 PDRG1Q9NUG6 133 aa27.12■■□□□ 1.93
CCDC47-204ENST00000582252 TAF5LO75529 589 aa27.11■■□□□ 1.93
CCDC47-204ENST00000582252 AK2P54819 239 aa27.11■■□□□ 1.93
CCDC47-204ENST00000582252 RUFY3Q7L099 469 aa27.11■■□□□ 1.93
CCDC47-204ENST00000582252 ZSCAN31Q96LW9 406 aaPredicted RBP27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms