RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 TNS4Q8IZW8 715 aa26.76■■□□□ 1.87
CCDC42-203ENST00000581598 TTLL11Q8NHH1 800 aa26.76■■□□□ 1.87
CCDC42-203ENST00000581598 CNOT7Q9UIV1 285 aaKnown RBP26.76■■□□□ 1.87
CCDC42-203ENST00000581598 GGA1Q9UJY5 639 aa26.76■■□□□ 1.87
CCDC42-203ENST00000581598 SALL2Q9Y467 1007 aaPredicted RBP26.76■■□□□ 1.87
CCDC42-203ENST00000581598 PSMD14O00487 310 aa26.75■■□□□ 1.87
CCDC42-203ENST00000581598 ECE2O60344 883 aa26.75■■□□□ 1.87
CCDC42-203ENST00000581598 EXOSC9Q06265 439 aaKnown RBP26.75■■□□□ 1.87
CCDC42-203ENST00000581598 CDC5LQ99459 802 aaKnown RBP26.75■■□□□ 1.87
CCDC42-203ENST00000581598 ZC3H12CQ9C0D7 883 aaKnown RBP26.75■■□□□ 1.87
CCDC42-203ENST00000581598 ANKIB1Q9P2G1 1089 aa26.75■■□□□ 1.87
CCDC42-203ENST00000581598 XDHP47989 1333 aa26.74■■□□□ 1.87
CCDC42-203ENST00000581598 H7C1D1 291 aa26.74■■□□□ 1.87
CCDC42-203ENST00000581598 RPS12P25398 132 aaKnown RBP26.74■■□□□ 1.87
CCDC42-203ENST00000581598 VEGFBP49765 207 aa26.74■■□□□ 1.87
CCDC42-203ENST00000581598 DNAAF4Q8WXU2 420 aa26.74■■□□□ 1.87
CCDC42-203ENST00000581598 CCDC85AQ96PX6 553 aaPredicted RBP26.74■■□□□ 1.87
CCDC42-203ENST00000581598 PLA2G12BQ9BX93 195 aa26.74■■□□□ 1.87
CCDC42-203ENST00000581598 SCN9AQ15858 1988 aa26.73■■□□□ 1.87
CCDC42-203ENST00000581598 CCER2I3L3R5 266 aa26.73■■□□□ 1.87
CCDC42-203ENST00000581598 UFL1O94874 794 aa26.73■■□□□ 1.87
CCDC42-203ENST00000581598 FKBP5Q13451 457 aaPredicted RBP26.73■■□□□ 1.87
CCDC42-203ENST00000581598 GCKRQ14397 625 aa26.73■■□□□ 1.87
CCDC42-203ENST00000581598 DEFB115Q30KQ5 88 aa26.73■■□□□ 1.87
CCDC42-203ENST00000581598 PSME4Q14997 1843 aa26.73■■□□□ 1.87
CCDC42-203ENST00000581598 HIRAP54198 1017 aaPredicted RBP26.72■■□□□ 1.87
CCDC42-203ENST00000581598 MICALL2Q8IY33 904 aa26.72■■□□□ 1.87
CCDC42-203ENST00000581598 FAM9BQ8IZU0 186 aa26.72■■□□□ 1.87
CCDC42-203ENST00000581598 LINS1Q8NG48 757 aa26.72■■□□□ 1.87
CCDC42-203ENST00000581598 GPR101Q96P66 508 aaPredicted RBP26.72■■□□□ 1.87
CCDC42-203ENST00000581598 MYH16Q9H6N6 1097 aa26.72■■□□□ 1.87
CCDC42-203ENST00000581598 SPINK5Q9NQ38 1064 aaPredicted RBP26.72■■□□□ 1.87
CCDC42-203ENST00000581598 BSDC1Q9NW68 430 aaPredicted RBP26.72■■□□□ 1.87
CCDC42-203ENST00000581598 CAPN15O75808 1086 aa26.71■■□□□ 1.87
CCDC42-203ENST00000581598 DOK7Q18PE1 504 aa26.71■■□□□ 1.87
CCDC42-203ENST00000581598 UBE3BQ7Z3V4 1068 aa26.71■■□□□ 1.87
CCDC42-203ENST00000581598 TRPM4Q8TD43 1214 aa26.71■■□□□ 1.87
CCDC42-203ENST00000581598 ZBTB12Q9Y330 459 aaPredicted RBP26.71■■□□□ 1.87
CCDC42-203ENST00000581598 ZNF609O15014 1411 aa26.71■■□□□ 1.87
CCDC42-203ENST00000581598 SPEF2Q9C093 1822 aa26.7■■□□□ 1.87
CCDC42-203ENST00000581598 ATP2B4P23634 1241 aa26.7■■□□□ 1.86
CCDC42-203ENST00000581598 CASP7P55210 303 aa26.7■■□□□ 1.86
CCDC42-203ENST00000581598 FMR1Q06787 632 aaKnown RBP eCLIP26.7■■□□□ 1.86
CCDC42-203ENST00000581598 CST9Q5W186 159 aa26.7■■□□□ 1.86
CCDC42-203ENST00000581598 GREM2Q9H772 168 aa26.7■■□□□ 1.86
CCDC42-203ENST00000581598 ABT1Q9ULW3 272 aaKnown RBP26.7■■□□□ 1.86
CCDC42-203ENST00000581598 TRAF5O00463 557 aa26.69■■□□□ 1.86
CCDC42-203ENST00000581598 VIL1P09327 827 aaKnown RBP26.69■■□□□ 1.86
CCDC42-203ENST00000581598 KCNQ5Q9NR82 932 aa26.69■■□□□ 1.86
CCDC42-203ENST00000581598 SHTN1A0MZ66 631 aa26.68■■□□□ 1.86
CCDC42-203ENST00000581598 CDC37L1Q7L3B6 337 aa26.67■■□□□ 1.86
CCDC42-203ENST00000581598 MINPP1Q9UNW1 487 aa26.67■■□□□ 1.86
CCDC42-203ENST00000581598 THSD7BQ9C0I4 1608 aa26.67■■□□□ 1.86
CCDC42-203ENST00000581598 ZNF521Q96K83 1311 aa26.66■■□□□ 1.86
CCDC42-203ENST00000581598 WDR33Q9C0J8 1336 aaKnown RBP26.66■■□□□ 1.86
CCDC42-203ENST00000581598 G3V3G9 751 aa26.66■■□□□ 1.86
CCDC42-203ENST00000581598 CSF1RP07333 972 aa26.66■■□□□ 1.86
CCDC42-203ENST00000581598 DCAF8Q5TAQ9 597 aa26.66■■□□□ 1.86
CCDC42-203ENST00000581598 GLIS2Q9BZE0 524 aaPredicted RBP26.66■■□□□ 1.86
CCDC42-203ENST00000581598 TLL2Q9Y6L7 1015 aa26.66■■□□□ 1.86
CCDC42-203ENST00000581598 MED23Q9ULK4 1368 aa26.65■■□□□ 1.86
CCDC42-203ENST00000581598 SAMD7Q7Z3H4 446 aa26.64■■□□□ 1.86
CCDC42-203ENST00000581598 PODNQ7Z5L7 613 aa26.64■■□□□ 1.86
CCDC42-203ENST00000581598 WBP1LQ9NX94 342 aa26.64■■□□□ 1.86
CCDC42-203ENST00000581598 IGHMBP2P38935 993 aaKnown RBP26.63■■□□□ 1.85
CCDC42-203ENST00000581598 ECE1P42892 770 aa26.63■■□□□ 1.85
CCDC42-203ENST00000581598 BEND3Q5T5X7 828 aa26.63■■□□□ 1.85
CCDC42-203ENST00000581598 AGBL3Q8NEM8 1001 aa26.63■■□□□ 1.85
CCDC42-203ENST00000581598 POLR2AP24928 1970 aaKnown RBP26.63■■□□□ 1.85
CCDC42-203ENST00000581598 CELF2O95319 508 aaKnown RBP26.62■■□□□ 1.85
CCDC42-203ENST00000581598 ITGA6P23229 1130 aa26.62■■□□□ 1.85
CCDC42-203ENST00000581598 CCT4P50991 539 aaKnown RBP26.62■■□□□ 1.85
CCDC42-203ENST00000581598 TBC1D10BQ4KMP7 808 aaPredicted RBP26.62■■□□□ 1.85
CCDC42-203ENST00000581598 RSBN1LQ6PCB5 846 aaPredicted RBP26.62■■□□□ 1.85
CCDC42-203ENST00000581598 HHIPL1Q96JK4 782 aa26.62■■□□□ 1.85
CCDC42-203ENST00000581598 FOXN1O15353 648 aa26.61■■□□□ 1.85
CCDC42-203ENST00000581598 SAPCD2Q86UD0 394 aa26.61■■□□□ 1.85
CCDC42-203ENST00000581598 AIDAQ96BJ3 306 aa26.61■■□□□ 1.85
CCDC42-203ENST00000581598 CAPNS2Q96L46 248 aa26.61■■□□□ 1.85
CCDC42-203ENST00000581598 LEMD3Q9Y2U8 911 aa26.61■■□□□ 1.85
CCDC42-203ENST00000581598 F6X3S4 739 aa26.6■■□□□ 1.85
CCDC42-203ENST00000581598 EGFRP00533 1210 aa26.6■■□□□ 1.85
CCDC42-203ENST00000581598 ZNF280AP59817 542 aaPredicted RBP26.6■■□□□ 1.85
CCDC42-203ENST00000581598 MAP2K1Q02750 393 aaPredicted RBP26.6■■□□□ 1.85
CCDC42-203ENST00000581598 FAM161AQ3B820 660 aa26.6■■□□□ 1.85
CCDC42-203ENST00000581598 KIF4BQ2VIQ3 1234 aa26.59■■□□□ 1.85
CCDC42-203ENST00000581598 GMLQ99445 158 aa26.59■■□□□ 1.85
CCDC42-203ENST00000581598 ANKRD2Q9GZV1 360 aa26.59■■□□□ 1.85
CCDC42-203ENST00000581598 ZNF646O15015 1829 aaPredicted RBP26.58■■□□□ 1.85
CCDC42-203ENST00000581598 USP17L3A6NCW0 530 aa26.58■■□□□ 1.85
CCDC42-203ENST00000581598 USP17L4A6NCW7 530 aa26.58■■□□□ 1.85
CCDC42-203ENST00000581598 CTCFP49711 727 aaPredicted RBP26.58■■□□□ 1.85
CCDC42-203ENST00000581598 USP17L1Q7RTZ2 530 aa26.58■■□□□ 1.85
CCDC42-203ENST00000581598 USP48Q86UV5 1035 aa26.58■■□□□ 1.85
CCDC42-203ENST00000581598 MPHOSPH8Q99549 860 aa26.58■■□□□ 1.85
CCDC42-203ENST00000581598 PRDM10Q9NQV6 1147 aa26.58■■□□□ 1.85
CCDC42-203ENST00000581598 WTIPA6NIX2 430 aaPredicted RBP26.57■■□□□ 1.84
CCDC42-203ENST00000581598 CYP4F22Q6NT55 531 aa26.57■■□□□ 1.84
CCDC42-203ENST00000581598 ANKRD18BA2A2Z9 1011 aa26.56■■□□□ 1.84
CCDC42-203ENST00000581598 FOXO4P98177 505 aa26.56■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms