RNA–Protein interactions for RNA: ENST00000581093.1

SENP3-206, Transcript of SUMO specific peptidase 3, humanhuman

TSL 5

Gene SENP3, Length 493 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-206ENST00000581093 PIM2Q9P1W9 311 aa8.36□□□□□ -1.07
SENP3-206ENST00000581093 TTC21BQ7Z4L5 1316 aa8.35□□□□□ -1.07
SENP3-206ENST00000581093 RBM47A0AV96 593 aaKnown RBP8.35□□□□□ -1.07
SENP3-206ENST00000581093 NRG2O14511 850 aaPredicted RBP8.35□□□□□ -1.07
SENP3-206ENST00000581093 DALRD3Q5D0E6 543 aaKnown RBP8.35□□□□□ -1.07
SENP3-206ENST00000581093 DNAJC14Q6Y2X3 702 aaPredicted RBP8.35□□□□□ -1.07
SENP3-206ENST00000581093 ZNF513Q8N8E2 541 aaPredicted RBP8.35□□□□□ -1.07
SENP3-206ENST00000581093 LSM14AQ8ND56 463 aaKnown RBP8.35□□□□□ -1.07
SENP3-206ENST00000581093 UBXN4Q92575 508 aa8.35□□□□□ -1.07
SENP3-206ENST00000581093 PALLDQ8WX93 1383 aa8.35□□□□□ -1.07
SENP3-206ENST00000581093 TTC21AQ8NDW8 1320 aa8.34□□□□□ -1.07
SENP3-206ENST00000581093 LOC100996750A0A140TA64 210 aa8.34□□□□□ -1.07
SENP3-206ENST00000581093 POTECB2RU33 542 aa8.34□□□□□ -1.07
SENP3-206ENST00000581093 BHMG1C9JSJ3 638 aaPredicted RBP8.34□□□□□ -1.07
SENP3-206ENST00000581093 KIF20AO95235 890 aa8.34□□□□□ -1.07
SENP3-206ENST00000581093 PRPF38BQ5VTL8 546 aaKnown RBP8.34□□□□□ -1.07
SENP3-206ENST00000581093 ZCRB1Q8TBF4 217 aaKnown RBP8.34□□□□□ -1.07
SENP3-206ENST00000581093 DCAF11Q8TEB1 546 aa8.34□□□□□ -1.07
SENP3-206ENST00000581093 SENP7Q9BQF6 1050 aa8.34□□□□□ -1.07
SENP3-206ENST00000581093 KRTAP4-6Q9BYQ5 205 aa8.34□□□□□ -1.07
SENP3-206ENST00000581093 CCDC87Q9NVE4 849 aa8.34□□□□□ -1.07
SENP3-206ENST00000581093 ABCF2Q9UG63 623 aa8.34□□□□□ -1.07
SENP3-206ENST00000581093 MRVI1Q9Y6F6 885 aa8.34□□□□□ -1.07
SENP3-206ENST00000581093 WASHC2AQ641Q2 1341 aa8.33□□□□□ -1.08
SENP3-206ENST00000581093 LTN1O94822 1766 aa8.33□□□□□ -1.08
SENP3-206ENST00000581093 CCDC194A0A1B0GVG4 234 aa8.33□□□□□ -1.08
SENP3-206ENST00000581093 KDM6AO15550 1401 aaPredicted RBP8.33□□□□□ -1.08
SENP3-206ENST00000581093 HS6ST3Q8IZP7 471 aa8.33□□□□□ -1.08
SENP3-206ENST00000581093 NLGN1Q8N2Q7 840 aa8.33□□□□□ -1.08
SENP3-206ENST00000581093 MPNDQ8N594 471 aa8.33□□□□□ -1.08
SENP3-206ENST00000581093 PNISRQ8TF01 805 aaKnown RBP8.33□□□□□ -1.08
SENP3-206ENST00000581093 MAP7D2Q96T17 732 aa8.33□□□□□ -1.08
SENP3-206ENST00000581093 SYNRGQ9UMZ2 1314 aa8.32□□□□□ -1.08
SENP3-206ENST00000581093 GOLGA6L3A6NEY3 463 aa8.32□□□□□ -1.08
SENP3-206ENST00000581093 FAM200BP0CF97 657 aa8.32□□□□□ -1.08
SENP3-206ENST00000581093 LMNB1P20700 586 aa8.32□□□□□ -1.08
SENP3-206ENST00000581093 CDC37Q16543 378 aaPredicted RBP8.32□□□□□ -1.08
SENP3-206ENST00000581093 GIMAP6Q6P9H5 292 aa8.32□□□□□ -1.08
SENP3-206ENST00000581093 MRPL50Q8N5N7 158 aaKnown RBP8.32□□□□□ -1.08
SENP3-206ENST00000581093 SMARCC1Q92922 1105 aaPredicted RBP8.32□□□□□ -1.08
SENP3-206ENST00000581093 FAM210AQ96ND0 272 aa8.32□□□□□ -1.08
SENP3-206ENST00000581093 IRF2BPLQ9H1B7 796 aa8.32□□□□□ -1.08
SENP3-206ENST00000581093 KIAA1522Q9P206 1035 aaPredicted RBP8.32□□□□□ -1.08
SENP3-206ENST00000581093 CCDC88AQ3V6T2 1871 aa8.32□□□□□ -1.08
SENP3-206ENST00000581093 PASKQ96RG2 1323 aa8.31□□□□□ -1.08
SENP3-206ENST00000581093 TMEM88BA6NKF7 163 aa8.31□□□□□ -1.08
SENP3-206ENST00000581093 ZMYND10O75800 440 aa8.31□□□□□ -1.08
SENP3-206ENST00000581093 BDNFP23560 247 aa8.31□□□□□ -1.08
SENP3-206ENST00000581093 PEX19P40855 299 aa8.31□□□□□ -1.08
SENP3-206ENST00000581093 FOSBP53539 338 aa8.31□□□□□ -1.08
SENP3-206ENST00000581093 TMF1P82094 1093 aa8.31□□□□□ -1.08
SENP3-206ENST00000581093 RASSF7Q02833 373 aa8.31□□□□□ -1.08
SENP3-206ENST00000581093 C4orf46Q504U0 113 aa8.31□□□□□ -1.08
SENP3-206ENST00000581093 MPRIPQ6WCQ1 1025 aa8.31□□□□□ -1.08
SENP3-206ENST00000581093 CREBRFQ8IUR6 639 aa8.31□□□□□ -1.08
SENP3-206ENST00000581093 ATL2Q8NHH9 583 aa8.31□□□□□ -1.08
SENP3-206ENST00000581093 PMM1Q92871 262 aa8.31□□□□□ -1.08
SENP3-206ENST00000581093 ITFG2Q969R8 447 aa8.31□□□□□ -1.08
SENP3-206ENST00000581093 SPOCK3Q9BQ16 436 aa8.31□□□□□ -1.08
SENP3-206ENST00000581093 A0A0C4DFX4 3053 aa8.31□□□□□ -1.08
SENP3-206ENST00000581093 C4AP0C0L4 1744 aa8.3□□□□□ -1.08
SENP3-206ENST00000581093 GNPATO15228 680 aa8.3□□□□□ -1.08
SENP3-206ENST00000581093 STK10O94804 968 aaKnown RBP8.3□□□□□ -1.08
SENP3-206ENST00000581093 GYS2P54840 703 aa8.3□□□□□ -1.08
SENP3-206ENST00000581093 PPP4CP60510 307 aa8.3□□□□□ -1.08
SENP3-206ENST00000581093 LINC00116Q8NCU8 138 aa8.3□□□□□ -1.08
SENP3-206ENST00000581093 SLC4A5Q9BY07 1137 aa8.3□□□□□ -1.08
SENP3-206ENST00000581093 MCOLN1Q9GZU1 580 aa8.3□□□□□ -1.08
SENP3-206ENST00000581093 GNL3LQ9NVN8 582 aaKnown RBP8.3□□□□□ -1.08
SENP3-206ENST00000581093 TPX2Q9ULW0 747 aaKnown RBP8.3□□□□□ -1.08
SENP3-206ENST00000581093 PARP3Q9Y6F1 533 aa8.3□□□□□ -1.08
SENP3-206ENST00000581093 FAM208AQ9UK61 1670 aaKnown RBP8.3□□□□□ -1.08
SENP3-206ENST00000581093 CASP8AP2Q9UKL3 1982 aa8.3□□□□□ -1.08
SENP3-206ENST00000581093 RASSF10A6NK89 507 aa8.29□□□□□ -1.08
SENP3-206ENST00000581093 TNNT2P45379 298 aaPredicted RBP8.29□□□□□ -1.08
SENP3-206ENST00000581093 TBC1D10BQ4KMP7 808 aaPredicted RBP8.29□□□□□ -1.08
SENP3-206ENST00000581093 BANK1Q8NDB2 785 aa8.29□□□□□ -1.08
SENP3-206ENST00000581093 LTV1Q96GA3 475 aaPredicted RBP8.29□□□□□ -1.08
SENP3-206ENST00000581093 PAIP2Q9BPZ3 127 aaKnown RBP8.29□□□□□ -1.08
SENP3-206ENST00000581093 KDM4CQ9H3R0 1056 aa8.29□□□□□ -1.08
SENP3-206ENST00000581093 KLHL42Q9P2K6 505 aa8.29□□□□□ -1.08
SENP3-206ENST00000581093 SWAP70Q9UH65 585 aa8.29□□□□□ -1.08
SENP3-206ENST00000581093 WDR33Q9C0J8 1336 aaKnown RBP8.29□□□□□ -1.08
SENP3-206ENST00000581093 USP31Q70CQ4 1352 aa8.28□□□□□ -1.08
SENP3-206ENST00000581093 LOC102724428A0A0B4J2F2 783 aa8.28□□□□□ -1.08
SENP3-206ENST00000581093 VGLL3A8MV65 326 aa8.28□□□□□ -1.08
SENP3-206ENST00000581093 U2SURPO15042 1029 aaKnown RBP8.28□□□□□ -1.08
SENP3-206ENST00000581093 SIK1P57059 783 aa8.28□□□□□ -1.08
SENP3-206ENST00000581093 NEXNQ0ZGT2 675 aa8.28□□□□□ -1.08
SENP3-206ENST00000581093 DEFB115Q30KQ5 88 aa8.28□□□□□ -1.08
SENP3-206ENST00000581093 DNTTIP2Q5QJE6 756 aaKnown RBP8.28□□□□□ -1.08
SENP3-206ENST00000581093 TRAPPC3LQ5T215 181 aa8.28□□□□□ -1.08
SENP3-206ENST00000581093 GJC2Q5T442 439 aaPredicted RBP8.28□□□□□ -1.08
SENP3-206ENST00000581093 HDGFL1Q5TGJ6 251 aa8.28□□□□□ -1.08
SENP3-206ENST00000581093 RPAINQ86UA6 219 aa8.28□□□□□ -1.08
SENP3-206ENST00000581093 TMC2Q8TDI7 906 aa8.28□□□□□ -1.08
SENP3-206ENST00000581093 IP6K1Q92551 441 aa8.28□□□□□ -1.08
SENP3-206ENST00000581093 BEGAINQ9BUH8 593 aa8.28□□□□□ -1.08
SENP3-206ENST00000581093 ANAPC4Q9UJX5 808 aa8.28□□□□□ -1.08
SENP3-206ENST00000581093 STK24Q9Y6E0 443 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms