RNA–Protein interactions for RNA: ENST00000580949.1

PTPRM-213, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-213ENST00000580949 NR3C2P08235 984 aa8.05□□□□□ -1.12
PTPRM-213ENST00000580949 SMCPP49901 116 aaPredicted RBP8.05□□□□□ -1.12
PTPRM-213ENST00000580949 DHX9Q08211 1270 aaKnown RBP8.05□□□□□ -1.12
PTPRM-213ENST00000580949 LMOD3Q0VAK6 560 aa8.05□□□□□ -1.12
PTPRM-213ENST00000580949 CHRNA2Q15822 529 aa8.05□□□□□ -1.12
PTPRM-213ENST00000580949 CTC1Q2NKJ3 1217 aa8.05□□□□□ -1.12
PTPRM-213ENST00000580949 MCM10Q7L590 875 aa8.05□□□□□ -1.12
PTPRM-213ENST00000580949 CCDC125Q86Z20 511 aa8.05□□□□□ -1.12
PTPRM-213ENST00000580949 CCDC116Q8IYX3 515 aa8.05□□□□□ -1.12
PTPRM-213ENST00000580949 CRIPAKQ8N1N5 446 aa8.05□□□□□ -1.12
PTPRM-213ENST00000580949 MBIPQ9NS73 344 aa8.05□□□□□ -1.12
PTPRM-213ENST00000580949 IFT57Q9NWB7 429 aa8.05□□□□□ -1.12
PTPRM-213ENST00000580949 LAS1LQ9Y4W2 734 aaKnown RBP8.05□□□□□ -1.12
PTPRM-213ENST00000580949 CHL1O00533 1208 aa8.04□□□□□ -1.12
PTPRM-213ENST00000580949 GIGYF1O75420 1035 aaPredicted RBP8.04□□□□□ -1.12
PTPRM-213ENST00000580949 GNAI1P63096 354 aa8.04□□□□□ -1.12
PTPRM-213ENST00000580949 MYT1Q01538 1121 aa8.04□□□□□ -1.12
PTPRM-213ENST00000580949 SEMA3FQ13275 785 aa8.04□□□□□ -1.12
PTPRM-213ENST00000580949 RNF20Q5VTR2 975 aa8.04□□□□□ -1.12
PTPRM-213ENST00000580949 B4GALNT3Q6L9W6 998 aa8.04□□□□□ -1.12
PTPRM-213ENST00000580949 TSPYL6Q8N831 410 aa8.04□□□□□ -1.12
PTPRM-213ENST00000580949 IL17REQ8NFR9 667 aa8.04□□□□□ -1.12
PTPRM-213ENST00000580949 CRBNQ96SW2 442 aa8.04□□□□□ -1.12
PTPRM-213ENST00000580949 KLF16Q9BXK1 252 aaPredicted RBP8.04□□□□□ -1.12
PTPRM-213ENST00000580949 ZMYND15Q9H091 742 aa8.04□□□□□ -1.12
PTPRM-213ENST00000580949 CEP126Q9P2H0 1117 aa8.04□□□□□ -1.12
PTPRM-213ENST00000580949 KIAA0232Q92628 1395 aa8.04□□□□□ -1.12
PTPRM-213ENST00000580949 CRB1P82279 1406 aa8.03□□□□□ -1.12
PTPRM-213ENST00000580949 NCAPD2Q15021 1401 aa8.03□□□□□ -1.12
PTPRM-213ENST00000580949 PHRF1Q9P1Y6 1649 aaKnown RBP8.03□□□□□ -1.12
PTPRM-213ENST00000580949 CPDO75976 1380 aa8.03□□□□□ -1.12
PTPRM-213ENST00000580949 WDR4P57081 412 aaKnown RBP8.03□□□□□ -1.12
PTPRM-213ENST00000580949 CALD1Q05682 793 aaKnown RBP8.03□□□□□ -1.12
PTPRM-213ENST00000580949 C8orf58Q8NAV2 365 aa8.03□□□□□ -1.12
PTPRM-213ENST00000580949 GAS2L2Q8NHY3 880 aa8.03□□□□□ -1.12
PTPRM-213ENST00000580949 SSH1Q8WYL5 1049 aa8.03□□□□□ -1.12
PTPRM-213ENST00000580949 BCL2L13Q9BXK5 485 aa8.03□□□□□ -1.12
PTPRM-213ENST00000580949 ALG2Q9H553 416 aa8.03□□□□□ -1.12
PTPRM-213ENST00000580949 MIS18AQ9NYP9 233 aa8.03□□□□□ -1.12
PTPRM-213ENST00000580949 TNNQ9UQP3 1299 aa8.03□□□□□ -1.12
PTPRM-213ENST00000580949 POM121CA8CG34 1229 aa8.02□□□□□ -1.13
PTPRM-213ENST00000580949 GNAT3A8MTJ3 354 aa8.02□□□□□ -1.13
PTPRM-213ENST00000580949 HTATSF1O43719 755 aaKnown RBP8.02□□□□□ -1.13
PTPRM-213ENST00000580949 TRAK2O60296 914 aa8.02□□□□□ -1.13
PTPRM-213ENST00000580949 VAMP4O75379 141 aa8.02□□□□□ -1.13
PTPRM-213ENST00000580949 CT47B1P0C2W7 299 aaPredicted RBP8.02□□□□□ -1.13
PTPRM-213ENST00000580949 TIMP2P16035 220 aa8.02□□□□□ -1.13
PTPRM-213ENST00000580949 PPP1R26Q5T8A7 1209 aaPredicted RBP8.02□□□□□ -1.13
PTPRM-213ENST00000580949 TRAF7Q6Q0C0 670 aa8.02□□□□□ -1.13
PTPRM-213ENST00000580949 NLRP2Q9NX02 1062 aa8.02□□□□□ -1.13
PTPRM-213ENST00000580949 LTN1O94822 1766 aa8.02□□□□□ -1.13
PTPRM-213ENST00000580949 ELL2O00472 640 aaPredicted RBP8.01□□□□□ -1.13
PTPRM-213ENST00000580949 AXIN1O15169 862 aa8.01□□□□□ -1.13
PTPRM-213ENST00000580949 RLBP1P12271 317 aa8.01□□□□□ -1.13
PTPRM-213ENST00000580949 KRT24Q2M2I5 525 aa8.01□□□□□ -1.13
PTPRM-213ENST00000580949 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.01□□□□□ -1.13
PTPRM-213ENST00000580949 PANK1Q8TE04 598 aa8.01□□□□□ -1.13
PTPRM-213ENST00000580949 AAASQ9NRG9 546 aa8.01□□□□□ -1.13
PTPRM-213ENST00000580949 PGPEP1Q9NXJ5 209 aa8.01□□□□□ -1.13
PTPRM-213ENST00000580949 MAP3K5Q99683 1374 aa8□□□□□ -1.13
PTPRM-213ENST00000580949 COL18A1P39060 1754 aa8□□□□□ -1.13
PTPRM-213ENST00000580949 ERVH48-1M5A8F1 160 aa8□□□□□ -1.13
PTPRM-213ENST00000580949 CAPN5O15484 640 aaPredicted RBP8□□□□□ -1.13
PTPRM-213ENST00000580949 RAB15P59190 212 aa8□□□□□ -1.13
PTPRM-213ENST00000580949 PDE3AQ14432 1141 aa8□□□□□ -1.13
PTPRM-213ENST00000580949 PLEKHO1Q53GL0 409 aaPredicted RBP8□□□□□ -1.13
PTPRM-213ENST00000580949 ZNF530Q6P9A1 599 aaPredicted RBP8□□□□□ -1.13
PTPRM-213ENST00000580949 PHTF2Q8N3S3 785 aa8□□□□□ -1.13
PTPRM-213ENST00000580949 RTF1Q92541 710 aaKnown RBP8□□□□□ -1.13
PTPRM-213ENST00000580949 FRAT1Q92837 279 aaPredicted RBP8□□□□□ -1.13
PTPRM-213ENST00000580949 ITPKCQ96DU7 683 aa8□□□□□ -1.13
PTPRM-213ENST00000580949 LGR6Q9HBX8 967 aa8□□□□□ -1.13
PTPRM-213ENST00000580949 PRDM11Q9NQV5 511 aa8□□□□□ -1.13
PTPRM-213ENST00000580949 LCE2BO14633 110 aa7.99□□□□□ -1.13
PTPRM-213ENST00000580949 TCERG1O14776 1098 aaKnown RBP7.99□□□□□ -1.13
PTPRM-213ENST00000580949 ZIC2O95409 532 aaPredicted RBP7.99□□□□□ -1.13
PTPRM-213ENST00000580949 CSB-PGBD3P0DP91 1061 aa7.99□□□□□ -1.13
PTPRM-213ENST00000580949 SLFNL1Q499Z3 407 aa7.99□□□□□ -1.13
PTPRM-213ENST00000580949 AMOTQ4VCS5 1084 aa7.99□□□□□ -1.13
PTPRM-213ENST00000580949 ADAMTS19Q8TE59 1207 aa7.99□□□□□ -1.13
PTPRM-213ENST00000580949 ZFAND3Q9H8U3 227 aa7.99□□□□□ -1.13
PTPRM-213ENST00000580949 SMC4Q9NTJ3 1288 aa7.99□□□□□ -1.13
PTPRM-213ENST00000580949 NOB1Q9ULX3 412 aaKnown RBP7.99□□□□□ -1.13
PTPRM-213ENST00000580949 CRYBG1Q9Y4K1 1723 aa7.99□□□□□ -1.13
PTPRM-213ENST00000580949 CAMTA1Q9Y6Y1 1673 aa7.98□□□□□ -1.13
PTPRM-213ENST00000580949 CEMIPQ8WUJ3 1361 aa7.98□□□□□ -1.13
PTPRM-213ENST00000580949 DLG5Q8TDM6 1919 aa7.98□□□□□ -1.13
PTPRM-213ENST00000580949 ST8SIA5O15466 376 aa7.98□□□□□ -1.13
PTPRM-213ENST00000580949 TAF7Q15545 349 aaPredicted RBP7.98□□□□□ -1.13
PTPRM-213ENST00000580949 TWISTNBQ3B726 338 aaPredicted RBP7.98□□□□□ -1.13
PTPRM-213ENST00000580949 ALDH1L2Q3SY69 923 aa7.98□□□□□ -1.13
PTPRM-213ENST00000580949 AKAP4Q5JQC9 854 aa7.98□□□□□ -1.13
PTPRM-213ENST00000580949 HDGFL1Q5TGJ6 251 aa7.98□□□□□ -1.13
PTPRM-213ENST00000580949 MPRIPQ6WCQ1 1025 aa7.98□□□□□ -1.13
PTPRM-213ENST00000580949 RNF135Q8IUD6 432 aa7.98□□□□□ -1.13
PTPRM-213ENST00000580949 CCDC136Q96JN2 1154 aa7.98□□□□□ -1.13
PTPRM-213ENST00000580949 NHSL1Q5SYE7 1610 aa7.98□□□□□ -1.13
PTPRM-213ENST00000580949 LMO7Q8WWI1 1683 aa7.98□□□□□ -1.13
PTPRM-213ENST00000580949 RGPD2P0DJD1 1756 aa7.97□□□□□ -1.13
PTPRM-213ENST00000580949 RNMTO43148 476 aaKnown RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms