RNA–Protein interactions for RNA: ENST00000580904.1

PSMD11-209, Transcript of proteasome 26S subunit, non-ATPase 11, humanhuman

TSL 4

Gene PSMD11, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD11-209ENST00000580904 GRM5P41594 1212 aa9.52□□□□□ -0.89
PSMD11-209ENST00000580904 TOM1L2Q6ZVM7 507 aa9.52□□□□□ -0.89
PSMD11-209ENST00000580904 UNC5CLQ8IV45 518 aa9.52□□□□□ -0.89
PSMD11-209ENST00000580904 CCDC116Q8IYX3 515 aa9.52□□□□□ -0.89
PSMD11-209ENST00000580904 CARD10Q9BWT7 1032 aa9.52□□□□□ -0.89
PSMD11-209ENST00000580904 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.52□□□□□ -0.89
PSMD11-209ENST00000580904 PGPEP1Q9NXJ5 209 aa9.52□□□□□ -0.89
PSMD11-209ENST00000580904 USP21Q9UK80 565 aa9.52□□□□□ -0.89
PSMD11-209ENST00000580904 J3QL48 77 aa9.51□□□□□ -0.89
PSMD11-209ENST00000580904 SMPD1P17405 629 aa9.51□□□□□ -0.89
PSMD11-209ENST00000580904 NNTQ13423 1086 aa9.51□□□□□ -0.89
PSMD11-209ENST00000580904 ESPNB1AK53 854 aa9.5□□□□□ -0.89
PSMD11-209ENST00000580904 GIGYF1O75420 1035 aaPredicted RBP9.5□□□□□ -0.89
PSMD11-209ENST00000580904 PRKAR2BP31323 418 aa9.5□□□□□ -0.89
PSMD11-209ENST00000580904 VPS72Q15906 364 aa9.5□□□□□ -0.89
PSMD11-209ENST00000580904 RNF135Q8IUD6 432 aa9.5□□□□□ -0.89
PSMD11-209ENST00000580904 CCDC146Q8IYE0 955 aa9.5□□□□□ -0.89
PSMD11-209ENST00000580904 GLMNQ92990 594 aa9.5□□□□□ -0.89
PSMD11-209ENST00000580904 PLEKHF1Q96S99 279 aa9.5□□□□□ -0.89
PSMD11-209ENST00000580904 PNNQ9H307 717 aaKnown RBP9.5□□□□□ -0.89
PSMD11-209ENST00000580904 SPATA31A1Q5TZJ5 1347 aa9.5□□□□□ -0.89
PSMD11-209ENST00000580904 SPATA31A5Q5VU36 1347 aa9.5□□□□□ -0.89
PSMD11-209ENST00000580904 SPATA31A7Q8IWB4 1347 aa9.5□□□□□ -0.89
PSMD11-209ENST00000580904 POM121CA8CG34 1229 aa9.49□□□□□ -0.89
PSMD11-209ENST00000580904 NFATC2IPQ8NCF5 419 aa9.49□□□□□ -0.89
PSMD11-209ENST00000580904 RUNDC1Q96C34 613 aa9.49□□□□□ -0.89
PSMD11-209ENST00000580904 USP35Q9P2H5 1018 aa9.49□□□□□ -0.89
PSMD11-209ENST00000580904 ATRNO75882 1429 aa9.48□□□□□ -0.89
PSMD11-209ENST00000580904 MEGF6O75095 1541 aa9.48□□□□□ -0.89
PSMD11-209ENST00000580904 RAB15P59190 212 aa9.48□□□□□ -0.89
PSMD11-209ENST00000580904 CTC1Q2NKJ3 1217 aa9.48□□□□□ -0.89
PSMD11-209ENST00000580904 MAP7D1Q3KQU3 841 aa9.48□□□□□ -0.89
PSMD11-209ENST00000580904 INTS6LQ5JSJ4 861 aaKnown RBP9.48□□□□□ -0.89
PSMD11-209ENST00000580904 TCP11L2Q8N4U5 519 aa9.48□□□□□ -0.89
PSMD11-209ENST00000580904 RAPGEF4Q8WZA2 1011 aa9.48□□□□□ -0.89
PSMD11-209ENST00000580904 PHACTR3Q96KR7 559 aa9.48□□□□□ -0.89
PSMD11-209ENST00000580904 THRAP3Q9Y2W1 955 aaKnown RBP9.48□□□□□ -0.89
PSMD11-209ENST00000580904 CCDC9Q9Y3X0 531 aaKnown RBP9.48□□□□□ -0.89
PSMD11-209ENST00000580904 MAPK8IP3Q9UPT6 1336 aa9.48□□□□□ -0.89
PSMD11-209ENST00000580904 PLEKHG2Q9H7P9 1386 aa9.48□□□□□ -0.89
PSMD11-209ENST00000580904 DISP2A7MBM2 1401 aa9.48□□□□□ -0.89
PSMD11-209ENST00000580904 LZTS3O60299 673 aaPredicted RBP9.47□□□□□ -0.89
PSMD11-209ENST00000580904 NEFMP07197 916 aa9.47□□□□□ -0.89
PSMD11-209ENST00000580904 IL2RBP14784 551 aa9.47□□□□□ -0.89
PSMD11-209ENST00000580904 TATP17735 454 aaPredicted RBP9.47□□□□□ -0.89
PSMD11-209ENST00000580904 TRPC5Q9UL62 973 aaPredicted RBP9.47□□□□□ -0.89
PSMD11-209ENST00000580904 PARP4Q9UKK3 1724 aaKnown RBP9.47□□□□□ -0.89
PSMD11-209ENST00000580904 OVOS2A0A0G2JMS6 1433 aa9.47□□□□□ -0.89
PSMD11-209ENST00000580904 GLI3P10071 1580 aa9.46□□□□□ -0.89
PSMD11-209ENST00000580904 APAF1O14727 1248 aa9.46□□□□□ -0.9
PSMD11-209ENST00000580904 PPP1R26Q5T8A7 1209 aaPredicted RBP9.46□□□□□ -0.9
PSMD11-209ENST00000580904 ZNF772Q68DY9 489 aaPredicted RBP9.46□□□□□ -0.9
PSMD11-209ENST00000580904 QTRT2Q9H974 415 aaKnown RBP9.46□□□□□ -0.9
PSMD11-209ENST00000580904 WNK3Q9BYP7 1800 aa9.46□□□□□ -0.9
PSMD11-209ENST00000580904 PKD1L3Q7Z443 1732 aa9.45□□□□□ -0.9
PSMD11-209ENST00000580904 ERVH48-1M5A8F1 160 aa9.45□□□□□ -0.9
PSMD11-209ENST00000580904 MYCP01106 439 aaPredicted RBP9.45□□□□□ -0.9
PSMD11-209ENST00000580904 AVPP01185 164 aa9.45□□□□□ -0.9
PSMD11-209ENST00000580904 TMPOP42166 694 aaKnown RBP9.45□□□□□ -0.9
PSMD11-209ENST00000580904 WDR4P57081 412 aaKnown RBP9.45□□□□□ -0.9
PSMD11-209ENST00000580904 MYT1Q01538 1121 aa9.45□□□□□ -0.9
PSMD11-209ENST00000580904 NFE2L2Q16236 605 aa9.45□□□□□ -0.9
PSMD11-209ENST00000580904 MTHFSDQ2M296 383 aaKnown RBP9.45□□□□□ -0.9
PSMD11-209ENST00000580904 PLEKHO1Q53GL0 409 aaPredicted RBP9.45□□□□□ -0.9
PSMD11-209ENST00000580904 CCDC97Q96F63 343 aaPredicted RBP9.45□□□□□ -0.9
PSMD11-209ENST00000580904 CDCA7Q9BWT1 371 aaPredicted RBP9.45□□□□□ -0.9
PSMD11-209ENST00000580904 DOLKQ9UPQ8 538 aa9.45□□□□□ -0.9
PSMD11-209ENST00000580904 PCDHB11Q9Y5F2 797 aa9.45□□□□□ -0.9
PSMD11-209ENST00000580904 SENP3-EIF4A1A0A087X0R7 540 aa9.44□□□□□ -0.9
PSMD11-209ENST00000580904 HNRNPUQ00839 825 aaKnown RBP eCLIP9.44□□□□□ -0.9
PSMD11-209ENST00000580904 USP4Q13107 963 aa9.44□□□□□ -0.9
PSMD11-209ENST00000580904 AMOTQ4VCS5 1084 aa9.44□□□□□ -0.9
PSMD11-209ENST00000580904 GAS2L2Q8NHY3 880 aa9.44□□□□□ -0.9
PSMD11-209ENST00000580904 HPS1Q92902 700 aa9.44□□□□□ -0.9
PSMD11-209ENST00000580904 RGS17Q9UGC6 210 aaPredicted RBP9.44□□□□□ -0.9
PSMD11-209ENST00000580904 SERPINA10Q9UK55 444 aa9.44□□□□□ -0.9
PSMD11-209ENST00000580904 SPG7Q9UQ90 795 aa9.44□□□□□ -0.9
PSMD11-209ENST00000580904 RRP7AQ9Y3A4 280 aaKnown RBP9.44□□□□□ -0.9
PSMD11-209ENST00000580904 THSD7AQ9UPZ6 1657 aa9.43□□□□□ -0.9
PSMD11-209ENST00000580904 LRRC37A3O60309 1634 aa9.43□□□□□ -0.9
PSMD11-209ENST00000580904 TNS2Q63HR2 1409 aa9.43□□□□□ -0.9
PSMD11-209ENST00000580904 CAPN5O15484 640 aaPredicted RBP9.43□□□□□ -0.9
PSMD11-209ENST00000580904 ZIC2O95409 532 aaPredicted RBP9.43□□□□□ -0.9
PSMD11-209ENST00000580904 NR3C2P08235 984 aa9.43□□□□□ -0.9
PSMD11-209ENST00000580904 ZNF530Q6P9A1 599 aaPredicted RBP9.43□□□□□ -0.9
PSMD11-209ENST00000580904 PHTF2Q8N3S3 785 aa9.43□□□□□ -0.9
PSMD11-209ENST00000580904 ZCRB1Q8TBF4 217 aaKnown RBP9.43□□□□□ -0.9
PSMD11-209ENST00000580904 YTHDC1Q96MU7 727 aaKnown RBP9.43□□□□□ -0.9
PSMD11-209ENST00000580904 SHANK3Q9BYB0 1731 aa9.42□□□□□ -0.9
PSMD11-209ENST00000580904 MAP3K5Q99683 1374 aa9.42□□□□□ -0.9
PSMD11-209ENST00000580904 AXIN1O15169 862 aa9.42□□□□□ -0.9
PSMD11-209ENST00000580904 CYP27B1O15528 508 aa9.42□□□□□ -0.9
PSMD11-209ENST00000580904 UPP2O95045 317 aa9.42□□□□□ -0.9
PSMD11-209ENST00000580904 SKIP12755 728 aa9.42□□□□□ -0.9
PSMD11-209ENST00000580904 SMCPP49901 116 aaPredicted RBP9.42□□□□□ -0.9
PSMD11-209ENST00000580904 RIPK4P57078 832 aa9.42□□□□□ -0.9
PSMD11-209ENST00000580904 RBM6P78332 1123 aaKnown RBP9.42□□□□□ -0.9
PSMD11-209ENST00000580904 AKAP4Q5JQC9 854 aa9.42□□□□□ -0.9
PSMD11-209ENST00000580904 Q6ZNB5 142 aa9.42□□□□□ -0.9
PSMD11-209ENST00000580904 NGEFQ8N5V2 710 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms