RNA–Protein interactions for RNA: ENST00000580713.1

TOP3A-210, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-210ENST00000580713 RASAL3Q86YV0 1011 aa14.14□□□□□ -0.15
TOP3A-210ENST00000580713 CDCA5Q96FF9 252 aa14.14□□□□□ -0.15
TOP3A-210ENST00000580713 THUMPD2Q9BTF0 503 aaKnown RBP14.14□□□□□ -0.15
TOP3A-210ENST00000580713 POLR2AP24928 1970 aaKnown RBP14.14□□□□□ -0.15
TOP3A-210ENST00000580713 DOK7Q18PE1 504 aa14.13□□□□□ -0.15
TOP3A-210ENST00000580713 DIEXFQ68CQ4 756 aaKnown RBP14.13□□□□□ -0.15
TOP3A-210ENST00000580713 SPDYE1Q8NFV5 336 aaPredicted RBP14.13□□□□□ -0.15
TOP3A-210ENST00000580713 ZNF296Q8WUU4 475 aaPredicted RBP14.13□□□□□ -0.15
TOP3A-210ENST00000580713 NSFL1CQ9UNZ2 370 aaKnown RBP14.13□□□□□ -0.15
TOP3A-210ENST00000580713 ECE2O60344 883 aa14.12□□□□□ -0.15
TOP3A-210ENST00000580713 EIF2S2P20042 333 aaKnown RBP14.12□□□□□ -0.15
TOP3A-210ENST00000580713 DDX10Q13206 875 aaKnown RBP14.12□□□□□ -0.15
TOP3A-210ENST00000580713 HABP4Q5JVS0 413 aaKnown RBP14.12□□□□□ -0.15
TOP3A-210ENST00000580713 TMC4Q7Z404 712 aa14.12□□□□□ -0.15
TOP3A-210ENST00000580713 KCNQ5Q9NR82 932 aa14.12□□□□□ -0.15
TOP3A-210ENST00000580713 TRMT112Q9UI30 125 aaKnown RBP14.12□□□□□ -0.15
TOP3A-210ENST00000580713 ERBB4Q15303 1308 aa14.12□□□□□ -0.15
TOP3A-210ENST00000580713 G3V3G9 751 aa14.11□□□□□ -0.15
TOP3A-210ENST00000580713 DCAF8Q5TAQ9 597 aa14.11□□□□□ -0.15
TOP3A-210ENST00000580713 ASTN2O75129 1339 aaPredicted RBP14.11□□□□□ -0.15
TOP3A-210ENST00000580713 ANXA1P04083 346 aa14.1□□□□□ -0.15
TOP3A-210ENST00000580713 AIMP1Q12904 312 aaKnown RBP14.1□□□□□ -0.15
TOP3A-210ENST00000580713 HSP90AB3PQ58FF7 597 aa14.1□□□□□ -0.15
TOP3A-210ENST00000580713 FBXO46Q6PJ61 603 aaPredicted RBP14.1□□□□□ -0.15
TOP3A-210ENST00000580713 NLRP10Q86W26 655 aa14.1□□□□□ -0.15
TOP3A-210ENST00000580713 ZNF428Q96B54 188 aa14.1□□□□□ -0.15
TOP3A-210ENST00000580713 EYA3Q99504 573 aa14.1□□□□□ -0.15
TOP3A-210ENST00000580713 SH3TC1Q8TE82 1336 aa14.1□□□□□ -0.15
TOP3A-210ENST00000580713 GPR25O00155 361 aa14.09□□□□□ -0.15
TOP3A-210ENST00000580713 FKBP1BP68106 108 aa14.09□□□□□ -0.15
TOP3A-210ENST00000580713 ANGEL2Q5VTE6 544 aaKnown RBP14.09□□□□□ -0.15
TOP3A-210ENST00000580713 POLLQ9UGP5 575 aa14.09□□□□□ -0.15
TOP3A-210ENST00000580713 UBE2Q2LH0YL09 131 aa14.08□□□□□ -0.16
TOP3A-210ENST00000580713 GPSM2P81274 684 aa14.08□□□□□ -0.16
TOP3A-210ENST00000580713 SCARF1Q14162 830 aa14.08□□□□□ -0.16
TOP3A-210ENST00000580713 TTLL12Q14166 644 aaPredicted RBP14.08□□□□□ -0.16
TOP3A-210ENST00000580713 MOB2Q70IA6 237 aa14.08□□□□□ -0.16
TOP3A-210ENST00000580713 RTL9Q8NET4 1388 aa14.08□□□□□ -0.16
TOP3A-210ENST00000580713 VIL1P09327 827 aaKnown RBP14.07□□□□□ -0.16
TOP3A-210ENST00000580713 MKRN3Q13064 507 aaKnown RBP14.07□□□□□ -0.16
TOP3A-210ENST00000580713 PDIA6Q15084 440 aa14.07□□□□□ -0.16
TOP3A-210ENST00000580713 PROSER3Q2NL68 480 aa14.07□□□□□ -0.16
TOP3A-210ENST00000580713 COPS6Q7L5N1 327 aa14.07□□□□□ -0.16
TOP3A-210ENST00000580713 NECTIN2Q92692 538 aa14.07□□□□□ -0.16
TOP3A-210ENST00000580713 CELF1Q92879 486 aaKnown RBP14.07□□□□□ -0.16
TOP3A-210ENST00000580713 ZC3H12CQ9C0D7 883 aaKnown RBP14.07□□□□□ -0.16
TOP3A-210ENST00000580713 TSPYL4Q9UJ04 414 aa14.07□□□□□ -0.16
TOP3A-210ENST00000580713 DUOX1Q9NRD9 1551 aa14.07□□□□□ -0.16
TOP3A-210ENST00000580713 FKTNO75072 461 aa14.06□□□□□ -0.16
TOP3A-210ENST00000580713 PPP2R1AP30153 589 aa14.06□□□□□ -0.16
TOP3A-210ENST00000580713 TCIRG1Q13488 830 aa14.06□□□□□ -0.16
TOP3A-210ENST00000580713 LRP10Q7Z4F1 713 aa14.06□□□□□ -0.16
TOP3A-210ENST00000580713 XAGE3Q8WTP9 111 aa14.06□□□□□ -0.16
TOP3A-210ENST00000580713 LAMB2P55268 1798 aa14.06□□□□□ -0.16
TOP3A-210ENST00000580713 KDM3BQ7LBC6 1761 aa14.06□□□□□ -0.16
TOP3A-210ENST00000580713 TAF1P21675 1872 aa14.06□□□□□ -0.16
TOP3A-210ENST00000580713 ANKRD36CQ5JPF3 1778 aa14.05□□□□□ -0.16
TOP3A-210ENST00000580713 TBC1D16Q8TBP0 767 aa14.05□□□□□ -0.16
TOP3A-210ENST00000580713 SCAF8Q9UPN6 1271 aaKnown RBP14.05□□□□□ -0.16
TOP3A-210ENST00000580713 TM4SF4P48230 202 aa14.04□□□□□ -0.16
TOP3A-210ENST00000580713 SREBF2Q12772 1141 aa14.04□□□□□ -0.16
TOP3A-210ENST00000580713 NFE2L2Q16236 605 aa14.04□□□□□ -0.16
TOP3A-210ENST00000580713 PRAMEF18Q5VWM3 479 aa14.04□□□□□ -0.16
TOP3A-210ENST00000580713 UFL1O94874 794 aa14.03□□□□□ -0.16
TOP3A-210ENST00000580713 VASPP50552 380 aaPredicted RBP14.03□□□□□ -0.16
TOP3A-210ENST00000580713 ZNF280AP59817 542 aaPredicted RBP14.03□□□□□ -0.16
TOP3A-210ENST00000580713 NOM1Q5C9Z4 860 aaKnown RBP14.03□□□□□ -0.16
TOP3A-210ENST00000580713 RSBN1LQ6PCB5 846 aaPredicted RBP14.03□□□□□ -0.16
TOP3A-210ENST00000580713 AGBL3Q8NEM8 1001 aa14.03□□□□□ -0.16
TOP3A-210ENST00000580713 FAM89AQ96GI7 184 aa14.03□□□□□ -0.16
TOP3A-210ENST00000580713 MYOZ2Q9NPC6 264 aa14.03□□□□□ -0.16
TOP3A-210ENST00000580713 PAPPA2Q9BXP8 1791 aa14.03□□□□□ -0.16
TOP3A-210ENST00000580713 PITPNM2Q9BZ72 1349 aa14.02□□□□□ -0.17
TOP3A-210ENST00000580713 POTEFA5A3E0 1075 aa14.02□□□□□ -0.17
TOP3A-210ENST00000580713 USP17L8P0C7I0 530 aa14.02□□□□□ -0.17
TOP3A-210ENST00000580713 NF2P35240 595 aa14.02□□□□□ -0.17
TOP3A-210ENST00000580713 RPS8P62241 208 aaKnown RBP14.02□□□□□ -0.17
TOP3A-210ENST00000580713 SF3B3Q15393 1217 aaKnown RBP14.02□□□□□ -0.17
TOP3A-210ENST00000580713 RTL5Q5HYW3 569 aaPredicted RBP14.02□□□□□ -0.17
TOP3A-210ENST00000580713 ANKIB1Q9P2G1 1089 aa14.02□□□□□ -0.17
TOP3A-210ENST00000580713 TRIM17Q9Y577 477 aa14.02□□□□□ -0.17
TOP3A-210ENST00000580713 INTS3Q68E01 1043 aaKnown RBP14.01□□□□□ -0.17
TOP3A-210ENST00000580713 R3HDMLQ9H3Y0 253 aa14.01□□□□□ -0.17
TOP3A-210ENST00000580713 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.01□□□□□ -0.17
TOP3A-210ENST00000580713 GGA1Q9UJY5 639 aa14.01□□□□□ -0.17
TOP3A-210ENST00000580713 LRRC37AA6NMS7 1700 aa14.01□□□□□ -0.17
TOP3A-210ENST00000580713 MAPK8IP3Q9UPT6 1336 aa14□□□□□ -0.17
TOP3A-210ENST00000580713 FXR1P51114 621 aaKnown RBP eCLIP14□□□□□ -0.17
TOP3A-210ENST00000580713 PRKG1Q13976 671 aa14□□□□□ -0.17
TOP3A-210ENST00000580713 DLG5Q8TDM6 1919 aa14□□□□□ -0.17
TOP3A-210ENST00000580713 ATP5J2-PTCD1G3V325 749 aa13.99□□□□□ -0.17
TOP3A-210ENST00000580713 ARMC9Q7Z3E5 817 aa13.99□□□□□ -0.17
TOP3A-210ENST00000580713 DDX60Q8IY21 1712 aaKnown RBP13.98□□□□□ -0.17
TOP3A-210ENST00000580713 SCN9AQ15858 1988 aa13.98□□□□□ -0.17
TOP3A-210ENST00000580713 USP17L3A6NCW0 530 aa13.98□□□□□ -0.17
TOP3A-210ENST00000580713 USP17L4A6NCW7 530 aa13.98□□□□□ -0.17
TOP3A-210ENST00000580713 IRS4O14654 1257 aaPredicted RBP13.98□□□□□ -0.17
TOP3A-210ENST00000580713 ALDH1A1P00352 501 aa13.98□□□□□ -0.17
TOP3A-210ENST00000580713 PTPN12Q05209 780 aaKnown RBP13.98□□□□□ -0.17
TOP3A-210ENST00000580713 NBPF9Q3BBW0 867 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms