RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 KIAA2012Q0VF49 1180 aa10.4□□□□□ -0.74
SMARCE1-217ENST00000580654 FBXO46Q6PJ61 603 aaPredicted RBP10.4□□□□□ -0.74
SMARCE1-217ENST00000580654 POTEBQ6S5H4 581 aa10.4□□□□□ -0.74
SMARCE1-217ENST00000580654 RBM17Q96I25 401 aaKnown RBP10.4□□□□□ -0.74
SMARCE1-217ENST00000580654 NYXQ9GZU5 481 aa10.4□□□□□ -0.74
SMARCE1-217ENST00000580654 IBTKQ9P2D0 1353 aaPredicted RBP10.39□□□□□ -0.75
SMARCE1-217ENST00000580654 HTTP42858 3142 aa10.39□□□□□ -0.75
SMARCE1-217ENST00000580654 COL3A1P02461 1466 aaPredicted RBP10.39□□□□□ -0.75
SMARCE1-217ENST00000580654 H7C1D1 291 aa10.39□□□□□ -0.75
SMARCE1-217ENST00000580654 TBC1D8O95759 1140 aa10.39□□□□□ -0.75
SMARCE1-217ENST00000580654 SNRPA1P09661 255 aaKnown RBP10.39□□□□□ -0.75
SMARCE1-217ENST00000580654 TNIP1Q15025 636 aa10.39□□□□□ -0.75
SMARCE1-217ENST00000580654 TBC1D10BQ4KMP7 808 aaPredicted RBP10.39□□□□□ -0.75
SMARCE1-217ENST00000580654 SUSD4Q5VX71 490 aa10.39□□□□□ -0.75
SMARCE1-217ENST00000580654 HDAC9Q9UKV0 1011 aa10.39□□□□□ -0.75
SMARCE1-217ENST00000580654 ANKRD36CQ5JPF3 1778 aa10.39□□□□□ -0.75
SMARCE1-217ENST00000580654 ABCC4O15439 1325 aa10.38□□□□□ -0.75
SMARCE1-217ENST00000580654 COL6A3P12111 3177 aa10.38□□□□□ -0.75
SMARCE1-217ENST00000580654 DIAPH1O60610 1272 aaKnown RBP10.38□□□□□ -0.75
SMARCE1-217ENST00000580654 NTSR2O95665 410 aa10.38□□□□□ -0.75
SMARCE1-217ENST00000580654 SUPT20HQ8NEM7 779 aa10.38□□□□□ -0.75
SMARCE1-217ENST00000580654 GAS2L2Q8NHY3 880 aa10.38□□□□□ -0.75
SMARCE1-217ENST00000580654 LRRC37AA6NMS7 1700 aa10.38□□□□□ -0.75
SMARCE1-217ENST00000580654 ASTN2O75129 1339 aaPredicted RBP10.37□□□□□ -0.75
SMARCE1-217ENST00000580654 FAM205CA6NFA0 338 aa10.37□□□□□ -0.75
SMARCE1-217ENST00000580654 GPR25O00155 361 aa10.37□□□□□ -0.75
SMARCE1-217ENST00000580654 GPTP24298 496 aa10.37□□□□□ -0.75
SMARCE1-217ENST00000580654 DPF2Q92785 391 aa10.37□□□□□ -0.75
SMARCE1-217ENST00000580654 R3HDMLQ9H3Y0 253 aa10.37□□□□□ -0.75
SMARCE1-217ENST00000580654 BRCA2P51587 3418 aa10.36□□□□□ -0.75
SMARCE1-217ENST00000580654 MAP3K15Q6ZN16 1313 aa10.36□□□□□ -0.75
SMARCE1-217ENST00000580654 SCN9AQ15858 1988 aa10.36□□□□□ -0.75
SMARCE1-217ENST00000580654 ERVV-1B6SEH8 477 aa10.36□□□□□ -0.75
SMARCE1-217ENST00000580654 PSMD14O00487 310 aa10.36□□□□□ -0.75
SMARCE1-217ENST00000580654 NOM1Q5C9Z4 860 aaKnown RBP10.36□□□□□ -0.75
SMARCE1-217ENST00000580654 AMER1Q5JTC6 1135 aaPredicted RBP10.36□□□□□ -0.75
SMARCE1-217ENST00000580654 DPP8Q6V1X1 898 aaPredicted RBP10.36□□□□□ -0.75
SMARCE1-217ENST00000580654 TTLL7Q6ZT98 887 aa10.36□□□□□ -0.75
SMARCE1-217ENST00000580654 SP8Q8IXZ3 490 aa10.36□□□□□ -0.75
SMARCE1-217ENST00000580654 ZNF34Q8IZ26 560 aa10.36□□□□□ -0.75
SMARCE1-217ENST00000580654 MPNDQ8N594 471 aa10.36□□□□□ -0.75
SMARCE1-217ENST00000580654 PDCD7Q8N8D1 485 aaKnown RBP10.36□□□□□ -0.75
SMARCE1-217ENST00000580654 DCPSQ96C86 337 aaKnown RBP10.36□□□□□ -0.75
SMARCE1-217ENST00000580654 CDCA5Q96FF9 252 aa10.36□□□□□ -0.75
SMARCE1-217ENST00000580654 CENPFP49454 3210 aa10.35□□□□□ -0.75
SMARCE1-217ENST00000580654 RBM26Q5T8P6 1007 aaKnown RBP10.35□□□□□ -0.75
SMARCE1-217ENST00000580654 MOB2Q70IA6 237 aa10.35□□□□□ -0.75
SMARCE1-217ENST00000580654 NGEFQ8N5V2 710 aa10.35□□□□□ -0.75
SMARCE1-217ENST00000580654 PHACTR3Q96KR7 559 aa10.35□□□□□ -0.75
SMARCE1-217ENST00000580654 RTL9Q8NET4 1388 aa10.35□□□□□ -0.75
SMARCE1-217ENST00000580654 DDX60Q8IY21 1712 aaKnown RBP10.35□□□□□ -0.75
SMARCE1-217ENST00000580654 TRIOBPQ9H2D6 2365 aa10.34□□□□□ -0.75
SMARCE1-217ENST00000580654 TM4SF4P48230 202 aa10.34□□□□□ -0.75
SMARCE1-217ENST00000580654 SLC17A8Q8NDX2 589 aa10.34□□□□□ -0.75
SMARCE1-217ENST00000580654 KCNQ5Q9NR82 932 aa10.34□□□□□ -0.75
SMARCE1-217ENST00000580654 GGA3Q9NZ52 723 aa10.34□□□□□ -0.75
SMARCE1-217ENST00000580654 COL4A1P02462 1669 aa10.34□□□□□ -0.75
SMARCE1-217ENST00000580654 EN2P19622 333 aaPredicted RBP10.33□□□□□ -0.76
SMARCE1-217ENST00000580654 KIF4BQ2VIQ3 1234 aa10.33□□□□□ -0.76
SMARCE1-217ENST00000580654 SLC10A5Q5PT55 438 aa10.33□□□□□ -0.76
SMARCE1-217ENST00000580654 NLRP3Q96P20 1036 aa10.33□□□□□ -0.76
SMARCE1-217ENST00000580654 CFHR5Q9BXR6 569 aa10.33□□□□□ -0.76
SMARCE1-217ENST00000580654 ZBTB3Q9H5J0 574 aa10.33□□□□□ -0.76
SMARCE1-217ENST00000580654 DBNDD1Q9H9R9 158 aa10.33□□□□□ -0.76
SMARCE1-217ENST00000580654 KNSTRNQ9Y448 316 aa10.33□□□□□ -0.76
SMARCE1-217ENST00000580654 KDM3BQ7LBC6 1761 aa10.33□□□□□ -0.76
SMARCE1-217ENST00000580654 RANBP2P49792 3224 aaKnown RBP10.32□□□□□ -0.76
SMARCE1-217ENST00000580654 FKTNO75072 461 aa10.32□□□□□ -0.76
SMARCE1-217ENST00000580654 BBOX1O75936 387 aa10.32□□□□□ -0.76
SMARCE1-217ENST00000580654 MCM10Q7L590 875 aa10.32□□□□□ -0.76
SMARCE1-217ENST00000580654 SULF1Q8IWU6 871 aa10.32□□□□□ -0.76
SMARCE1-217ENST00000580654 TMX4Q9H1E5 349 aaPredicted RBP10.32□□□□□ -0.76
SMARCE1-217ENST00000580654 CEP290O15078 2479 aa10.31□□□□□ -0.76
SMARCE1-217ENST00000580654 PSME4Q14997 1843 aa10.31□□□□□ -0.76
SMARCE1-217ENST00000580654 UBE2Q2LH0YL09 131 aa10.31□□□□□ -0.76
SMARCE1-217ENST00000580654 U2SURPO15042 1029 aaKnown RBP10.31□□□□□ -0.76
SMARCE1-217ENST00000580654 RPS12P25398 132 aaKnown RBP10.31□□□□□ -0.76
SMARCE1-217ENST00000580654 FKBP1BP68106 108 aa10.31□□□□□ -0.76
SMARCE1-217ENST00000580654 INTS3Q68E01 1043 aaKnown RBP10.31□□□□□ -0.76
SMARCE1-217ENST00000580654 SCAF8Q9UPN6 1271 aaKnown RBP10.31□□□□□ -0.76
SMARCE1-217ENST00000580654 LAMB1P07942 1786 aa10.31□□□□□ -0.76
SMARCE1-217ENST00000580654 KIAA0100Q14667 2235 aaKnown RBP10.3□□□□□ -0.76
SMARCE1-217ENST00000580654 MKRN3Q13064 507 aaKnown RBP10.3□□□□□ -0.76
SMARCE1-217ENST00000580654 DCTN1Q14203 1278 aa10.3□□□□□ -0.76
SMARCE1-217ENST00000580654 ANGEL2Q5VTE6 544 aaKnown RBP10.3□□□□□ -0.76
SMARCE1-217ENST00000580654 GIGYF2Q6Y7W6 1299 aaKnown RBP10.3□□□□□ -0.76
SMARCE1-217ENST00000580654 KIF6Q6ZMV9 814 aa10.3□□□□□ -0.76
SMARCE1-217ENST00000580654 OTOP1Q7RTM1 612 aa10.3□□□□□ -0.76
SMARCE1-217ENST00000580654 PPP1R42Q7Z4L9 355 aa10.3□□□□□ -0.76
SMARCE1-217ENST00000580654 RSPH6AQ9H0K4 717 aa10.3□□□□□ -0.76
SMARCE1-217ENST00000580654 RRP7AQ9Y3A4 280 aaKnown RBP10.3□□□□□ -0.76
SMARCE1-217ENST00000580654 TRIM17Q9Y577 477 aa10.3□□□□□ -0.76
SMARCE1-217ENST00000580654 RIMBP2O15034 1052 aa10.29□□□□□ -0.76
SMARCE1-217ENST00000580654 ECE2O60344 883 aa10.29□□□□□ -0.76
SMARCE1-217ENST00000580654 PYGBP11216 843 aa10.29□□□□□ -0.76
SMARCE1-217ENST00000580654 PRKAR2BP31323 418 aa10.29□□□□□ -0.76
SMARCE1-217ENST00000580654 GRAPQ13588 217 aa10.29□□□□□ -0.76
SMARCE1-217ENST00000580654 SCARF1Q14162 830 aa10.29□□□□□ -0.76
SMARCE1-217ENST00000580654 DOK7Q18PE1 504 aa10.29□□□□□ -0.76
SMARCE1-217ENST00000580654 WASHC4Q2M389 1173 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms