RNA–Protein interactions for RNA: ENST00000579609.5

PPP4R1-213, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-213ENST00000579609 HELLSQ9NRZ9 838 aa10.63□□□□□ -0.71
PPP4R1-213ENST00000579609 DBNLQ9UJU6 430 aaKnown RBP10.63□□□□□ -0.71
PPP4R1-213ENST00000579609 PALD1Q9ULE6 856 aa10.63□□□□□ -0.71
PPP4R1-213ENST00000579609 CYP46A1Q9Y6A2 500 aa10.63□□□□□ -0.71
PPP4R1-213ENST00000579609 RTL9Q8NET4 1388 aa10.63□□□□□ -0.71
PPP4R1-213ENST00000579609 PTCD1O75127 700 aaKnown RBP10.62□□□□□ -0.71
PPP4R1-213ENST00000579609 MBD3O95983 291 aa10.62□□□□□ -0.71
PPP4R1-213ENST00000579609 ZFYP08048 801 aaPredicted RBP10.62□□□□□ -0.71
PPP4R1-213ENST00000579609 HMGB1P09429 215 aaKnown RBP10.62□□□□□ -0.71
PPP4R1-213ENST00000579609 CYP19A1P11511 503 aaPredicted RBP10.62□□□□□ -0.71
PPP4R1-213ENST00000579609 MRE11P49959 708 aa10.62□□□□□ -0.71
PPP4R1-213ENST00000579609 TFCP2Q12800 502 aa10.62□□□□□ -0.71
PPP4R1-213ENST00000579609 ATP6V1DQ9Y5K8 247 aa10.62□□□□□ -0.71
PPP4R1-213ENST00000579609 SPATA31A5Q5VU36 1347 aa10.61□□□□□ -0.71
PPP4R1-213ENST00000579609 SPATA31A7Q8IWB4 1347 aa10.61□□□□□ -0.71
PPP4R1-213ENST00000579609 GOLGA6L3A6NEY3 463 aa10.61□□□□□ -0.71
PPP4R1-213ENST00000579609 ATP5J2-PTCD1G3V325 749 aa10.61□□□□□ -0.71
PPP4R1-213ENST00000579609 TOM1O60784 492 aa10.61□□□□□ -0.71
PPP4R1-213ENST00000579609 CD44P16070 742 aaKnown RBP10.61□□□□□ -0.71
PPP4R1-213ENST00000579609 NMIQ13287 307 aaPredicted RBP10.61□□□□□ -0.71
PPP4R1-213ENST00000579609 CCDC57Q2TAC2 916 aa10.61□□□□□ -0.71
PPP4R1-213ENST00000579609 RUFY3Q7L099 469 aa10.61□□□□□ -0.71
PPP4R1-213ENST00000579609 DNAJC10Q8IXB1 793 aa10.61□□□□□ -0.71
PPP4R1-213ENST00000579609 DSCC1Q9BVC3 393 aa10.61□□□□□ -0.71
PPP4R1-213ENST00000579609 CCDC8Q9H0W5 538 aaPredicted RBP10.61□□□□□ -0.71
PPP4R1-213ENST00000579609 CEP126Q9P2H0 1117 aa10.61□□□□□ -0.71
PPP4R1-213ENST00000579609 SSFA2P28290 1259 aa10.6□□□□□ -0.71
PPP4R1-213ENST00000579609 DDB1Q16531 1140 aa10.6□□□□□ -0.71
PPP4R1-213ENST00000579609 MCMDC2Q4G0Z9 681 aa10.6□□□□□ -0.71
PPP4R1-213ENST00000579609 PARP10Q53GL7 1025 aa10.6□□□□□ -0.71
PPP4R1-213ENST00000579609 CREB3L3Q68CJ9 461 aa10.6□□□□□ -0.71
PPP4R1-213ENST00000579609 RGS22Q8NE09 1264 aa10.6□□□□□ -0.71
PPP4R1-213ENST00000579609 PHF12Q96QT6 1004 aa10.6□□□□□ -0.71
PPP4R1-213ENST00000579609 MFRPQ9BY79 579 aa10.6□□□□□ -0.71
PPP4R1-213ENST00000579609 SIL1Q9H173 461 aa10.6□□□□□ -0.71
PPP4R1-213ENST00000579609 IL25Q9H293 177 aa10.6□□□□□ -0.71
PPP4R1-213ENST00000579609 ZBTB3Q9H5J0 574 aa10.6□□□□□ -0.71
PPP4R1-213ENST00000579609 ASAP1Q9ULH1 1129 aa10.6□□□□□ -0.71
PPP4R1-213ENST00000579609 RBM8AQ9Y5S9 174 aaKnown RBP10.6□□□□□ -0.71
PPP4R1-213ENST00000579609 TAF5LO75529 589 aa10.59□□□□□ -0.71
PPP4R1-213ENST00000579609 PDCP20941 246 aa10.59□□□□□ -0.71
PPP4R1-213ENST00000579609 IFIT5Q13325 482 aaKnown RBP10.59□□□□□ -0.71
PPP4R1-213ENST00000579609 CSPP1Q1MSJ5 1256 aa10.59□□□□□ -0.71
PPP4R1-213ENST00000579609 CCDC158Q5M9N0 1113 aa10.59□□□□□ -0.71
PPP4R1-213ENST00000579609 NLRP10Q86W26 655 aa10.59□□□□□ -0.71
PPP4R1-213ENST00000579609 FBXL16Q8N461 479 aa10.59□□□□□ -0.71
PPP4R1-213ENST00000579609 TMEM87AQ8NBN3 555 aa10.59□□□□□ -0.71
PPP4R1-213ENST00000579609 BOLA2Q9H3K6 86 aa10.59□□□□□ -0.71
PPP4R1-213ENST00000579609 PDRG1Q9NUG6 133 aa10.59□□□□□ -0.71
PPP4R1-213ENST00000579609 ATRNO75882 1429 aa10.58□□□□□ -0.72
PPP4R1-213ENST00000579609 SCN7AQ01118 1682 aa10.58□□□□□ -0.72
PPP4R1-213ENST00000579609 SLC27A2O14975 620 aa10.58□□□□□ -0.72
PPP4R1-213ENST00000579609 PDE8AO60658 829 aa10.58□□□□□ -0.72
PPP4R1-213ENST00000579609 MAP4K4O95819 1239 aaPredicted RBP10.58□□□□□ -0.72
PPP4R1-213ENST00000579609 CASTP20810 708 aaKnown RBP10.58□□□□□ -0.72
PPP4R1-213ENST00000579609 KCNJ4P48050 445 aa10.58□□□□□ -0.72
PPP4R1-213ENST00000579609 EIF5P55010 431 aaKnown RBP10.58□□□□□ -0.72
PPP4R1-213ENST00000579609 ZSCAN25Q6NSZ9 544 aa10.58□□□□□ -0.72
PPP4R1-213ENST00000579609 ZNF34Q8IZ26 560 aa10.58□□□□□ -0.72
PPP4R1-213ENST00000579609 DBNDD2Q9BQY9 259 aa10.58□□□□□ -0.72
PPP4R1-213ENST00000579609 BCL11AQ9H165 835 aa10.58□□□□□ -0.72
PPP4R1-213ENST00000579609 PAG1Q9NWQ8 432 aa10.58□□□□□ -0.72
PPP4R1-213ENST00000579609 TLR7Q9NYK1 1049 aaKnown RBP10.58□□□□□ -0.72
PPP4R1-213ENST00000579609 DOCK2Q92608 1830 aa10.58□□□□□ -0.72
PPP4R1-213ENST00000579609 DDX60Q8IY21 1712 aaKnown RBP10.58□□□□□ -0.72
PPP4R1-213ENST00000579609 NHSQ6T4R5 1651 aa10.57□□□□□ -0.72
PPP4R1-213ENST00000579609 THSD7AQ9UPZ6 1657 aa10.57□□□□□ -0.72
PPP4R1-213ENST00000579609 A0A0D9SFI3 127 aa10.57□□□□□ -0.72
PPP4R1-213ENST00000579609 IGSF3O75054 1194 aa10.57□□□□□ -0.72
PPP4R1-213ENST00000579609 RPS6KB1P23443 525 aa10.57□□□□□ -0.72
PPP4R1-213ENST00000579609 AK2P54819 239 aa10.57□□□□□ -0.72
PPP4R1-213ENST00000579609 CTSWP56202 376 aa10.57□□□□□ -0.72
PPP4R1-213ENST00000579609 ZNF445P59923 1031 aa10.57□□□□□ -0.72
PPP4R1-213ENST00000579609 PTH1RQ03431 593 aa10.57□□□□□ -0.72
PPP4R1-213ENST00000579609 ZMYM1Q5SVZ6 1142 aa10.57□□□□□ -0.72
PPP4R1-213ENST00000579609 PRPF40BQ6NWY9 871 aaKnown RBP10.57□□□□□ -0.72
PPP4R1-213ENST00000579609 BLOC1S2Q6QNY1 142 aa10.57□□□□□ -0.72
PPP4R1-213ENST00000579609 CLEC4GQ6UXB4 293 aa10.57□□□□□ -0.72
PPP4R1-213ENST00000579609 ZGPATQ8N5A5 531 aaKnown RBP10.57□□□□□ -0.72
PPP4R1-213ENST00000579609 KLHDC4Q8TBB5 520 aa10.57□□□□□ -0.72
PPP4R1-213ENST00000579609 SYAP1Q96A49 352 aaPredicted RBP10.57□□□□□ -0.72
PPP4R1-213ENST00000579609 JAKMIP1Q96N16 626 aaKnown RBP10.57□□□□□ -0.72
PPP4R1-213ENST00000579609 UPF3BQ9BZI7 483 aaKnown RBP10.57□□□□□ -0.72
PPP4R1-213ENST00000579609 LMBRD1Q9NUN5 540 aa10.57□□□□□ -0.72
PPP4R1-213ENST00000579609 CCDC87Q9NVE4 849 aa10.57□□□□□ -0.72
PPP4R1-213ENST00000579609 ZDHHC9Q9Y397 364 aa10.57□□□□□ -0.72
PPP4R1-213ENST00000579609 RIC1Q4ADV7 1423 aa10.57□□□□□ -0.72
PPP4R1-213ENST00000579609 AKAP11Q9UKA4 1901 aa10.56□□□□□ -0.72
PPP4R1-213ENST00000579609 LAMA4Q16363 1823 aa10.56□□□□□ -0.72
PPP4R1-213ENST00000579609 CARMIL3Q8ND23 1372 aa10.56□□□□□ -0.72
PPP4R1-213ENST00000579609 A0A1B0GUL7 405 aa10.56□□□□□ -0.72
PPP4R1-213ENST00000579609 ANKRD18BA2A2Z9 1011 aa10.56□□□□□ -0.72
PPP4R1-213ENST00000579609 HMGB2P26583 209 aaKnown RBP10.56□□□□□ -0.72
PPP4R1-213ENST00000579609 PIP4K2AP48426 406 aaPredicted RBP10.56□□□□□ -0.72
PPP4R1-213ENST00000579609 TTF1Q15361 905 aaPredicted RBP10.56□□□□□ -0.72
PPP4R1-213ENST00000579609 TMED8Q6PL24 325 aaPredicted RBP10.56□□□□□ -0.72
PPP4R1-213ENST00000579609 EFCAB3Q8N7B9 438 aa10.56□□□□□ -0.72
PPP4R1-213ENST00000579609 FAM227BQ96M60 508 aa10.56□□□□□ -0.72
PPP4R1-213ENST00000579609 CTNNA3Q9UI47 895 aa10.56□□□□□ -0.72
PPP4R1-213ENST00000579609 SMC3Q9UQE7 1217 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms