RNA–Protein interactions for RNA: ENST00000579483.1

MSI2-209, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best)

Gene MSI2, Length 5,141 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-209ENST00000579483 MEIS3Q99687 375 aa11.83□□□□□ -0.52
MSI2-209ENST00000579483 ARHGEF10LQ9HCE6 1279 aa11.83□□□□□ -0.52
MSI2-209ENST00000579483 MCM9Q9NXL9 1143 aa11.83□□□□□ -0.52
MSI2-209ENST00000579483 TNPO1Q92973 898 aaKnown RBP11.82□□□□□ -0.52
MSI2-209ENST00000579483 DDX11Q96FC9 970 aa11.82□□□□□ -0.52
MSI2-209ENST00000579483 WWC3Q9ULE0 1092 aa11.82□□□□□ -0.52
MSI2-209ENST00000579483 IVNS1ABPQ9Y6Y0 642 aa11.82□□□□□ -0.52
MSI2-209ENST00000579483 ANKARQ7Z5J8 1434 aa11.82□□□□□ -0.52
MSI2-209ENST00000579483 RTL9Q8NET4 1388 aa11.82□□□□□ -0.52
MSI2-209ENST00000579483 NEBLO76041 1014 aa11.82□□□□□ -0.52
MSI2-209ENST00000579483 TEX11Q8IYF3 940 aa11.82□□□□□ -0.52
MSI2-209ENST00000579483 DRC1Q96MC2 740 aa11.82□□□□□ -0.52
MSI2-209ENST00000579483 DEF6Q9H4E7 631 aa11.82□□□□□ -0.52
MSI2-209ENST00000579483 TSHZ2Q9NRE2 1034 aa11.82□□□□□ -0.52
MSI2-209ENST00000579483 USP16Q9Y5T5 823 aa11.82□□□□□ -0.52
MSI2-209ENST00000579483 MROH5Q6ZUA9 1318 aa11.82□□□□□ -0.52
MSI2-209ENST00000579483 C2CD5Q86YS7 1000 aa11.82□□□□□ -0.52
MSI2-209ENST00000579483 SEPT12Q8IYM1 358 aa11.82□□□□□ -0.52
MSI2-209ENST00000579483 FAM89AQ96GI7 184 aa11.82□□□□□ -0.52
MSI2-209ENST00000579483 METP08581 1390 aa11.82□□□□□ -0.52
MSI2-209ENST00000579483 SERPINC1P01008 464 aa11.82□□□□□ -0.52
MSI2-209ENST00000579483 CETN2P41208 172 aa11.82□□□□□ -0.52
MSI2-209ENST00000579483 HDAC1Q13547 482 aaPredicted RBP11.82□□□□□ -0.52
MSI2-209ENST00000579483 BMP2KLQ5H9B9 411 aa11.82□□□□□ -0.52
MSI2-209ENST00000579483 SMARCC2Q8TAQ2 1214 aa11.82□□□□□ -0.52
MSI2-209ENST00000579483 LOC102724428A0A0B4J2F2 783 aa11.81□□□□□ -0.52
MSI2-209ENST00000579483 SMTNL1A8MU46 457 aa11.81□□□□□ -0.52
MSI2-209ENST00000579483 VAMP4O75379 141 aa11.81□□□□□ -0.52
MSI2-209ENST00000579483 SIK1P57059 783 aa11.81□□□□□ -0.52
MSI2-209ENST00000579483 DLGAP5Q15398 846 aa11.81□□□□□ -0.52
MSI2-209ENST00000579483 ARHGAP27Q6ZUM4 889 aa11.81□□□□□ -0.52
MSI2-209ENST00000579483 ARHGEF25Q86VW2 580 aa11.81□□□□□ -0.52
MSI2-209ENST00000579483 NAP1L4Q99733 375 aaKnown RBP11.81□□□□□ -0.52
MSI2-209ENST00000579483 TRIM5Q9C035 493 aa11.81□□□□□ -0.52
MSI2-209ENST00000579483 RNF113AO15541 343 aaKnown RBP11.81□□□□□ -0.52
MSI2-209ENST00000579483 CC2D2BQ6DHV5 1058 aa11.81□□□□□ -0.52
MSI2-209ENST00000579483 USP37Q86T82 979 aa11.81□□□□□ -0.52
MSI2-209ENST00000579483 PHACTR3Q96KR7 559 aa11.81□□□□□ -0.52
MSI2-209ENST00000579483 TRIM37O94972 964 aa11.81□□□□□ -0.52
MSI2-209ENST00000579483 ATP2B4P23634 1241 aa11.81□□□□□ -0.52
MSI2-209ENST00000579483 BRPF1P55201 1214 aaPredicted RBP11.81□□□□□ -0.52
MSI2-209ENST00000579483 USP48Q86UV5 1035 aa11.81□□□□□ -0.52
MSI2-209ENST00000579483 PLS1Q14651 629 aa11.81□□□□□ -0.52
MSI2-209ENST00000579483 CWF19L2Q2TBE0 894 aaKnown RBP11.81□□□□□ -0.52
MSI2-209ENST00000579483 A1BGP04217 495 aa11.8□□□□□ -0.52
MSI2-209ENST00000579483 HCLS1P14317 486 aaPredicted RBP11.8□□□□□ -0.52
MSI2-209ENST00000579483 RPS8P62241 208 aaKnown RBP11.8□□□□□ -0.52
MSI2-209ENST00000579483 ZBTB43O43298 467 aa11.8□□□□□ -0.52
MSI2-209ENST00000579483 ZNF408Q9H9D4 720 aa11.8□□□□□ -0.52
MSI2-209ENST00000579483 LPIN2Q92539 896 aa11.8□□□□□ -0.52
MSI2-209ENST00000579483 C6orf50Q9HD87 102 aa11.8□□□□□ -0.52
MSI2-209ENST00000579483 JCADQ9P266 1359 aa11.8□□□□□ -0.52
MSI2-209ENST00000579483 CHL1O00533 1208 aa11.8□□□□□ -0.52
MSI2-209ENST00000579483 PRPF40AO75400 957 aaKnown RBP11.8□□□□□ -0.52
MSI2-209ENST00000579483 CALML3P27482 149 aa11.8□□□□□ -0.52
MSI2-209ENST00000579483 KIF22Q14807 665 aa11.8□□□□□ -0.52
MSI2-209ENST00000579483 DCAF15Q66K64 600 aa11.8□□□□□ -0.52
MSI2-209ENST00000579483 CKAP2LQ8IYA6 745 aa11.8□□□□□ -0.52
MSI2-209ENST00000579483 CCDC82Q8N4S0 544 aa11.8□□□□□ -0.52
MSI2-209ENST00000579483 HELBQ8NG08 1087 aaPredicted RBP11.8□□□□□ -0.52
MSI2-209ENST00000579483 ZNF496Q96IT1 587 aaPredicted RBP11.8□□□□□ -0.52
MSI2-209ENST00000579483 SLC5A4Q9NY91 659 aa11.8□□□□□ -0.52
MSI2-209ENST00000579483 TTC37Q6PGP7 1564 aa11.8□□□□□ -0.52
MSI2-209ENST00000579483 SPDYE3A6NKU9 549 aa11.79□□□□□ -0.52
MSI2-209ENST00000579483 BRINP3Q76B58 766 aa11.79□□□□□ -0.52
MSI2-209ENST00000579483 APBB1IPQ7Z5R6 666 aaPredicted RBP11.79□□□□□ -0.52
MSI2-209ENST00000579483 CCDC83Q8IWF9 413 aa11.79□□□□□ -0.52
MSI2-209ENST00000579483 GLT8D2Q9H1C3 349 aa11.79□□□□□ -0.52
MSI2-209ENST00000579483 ACBD3Q9H3P7 528 aa11.79□□□□□ -0.52
MSI2-209ENST00000579483 TSPY26PQ9H489 355 aa11.79□□□□□ -0.52
MSI2-209ENST00000579483 PABPC4Q13310 644 aaKnown RBP eCLIP11.79□□□□□ -0.52
MSI2-209ENST00000579483 OTUD7BQ6GQQ9 843 aa11.79□□□□□ -0.52
MSI2-209ENST00000579483 MYOM2P54296 1465 aa11.79□□□□□ -0.52
MSI2-209ENST00000579483 UBA7P41226 1012 aa11.79□□□□□ -0.52
MSI2-209ENST00000579483 NOM1Q5C9Z4 860 aaKnown RBP11.79□□□□□ -0.52
MSI2-209ENST00000579483 MICU3Q86XE3 530 aa11.79□□□□□ -0.52
MSI2-209ENST00000579483 RRP36Q96EU6 259 aaKnown RBP11.79□□□□□ -0.52
MSI2-209ENST00000579483 CSADQ9Y600 493 aa11.79□□□□□ -0.52
MSI2-209ENST00000579483 PTPRTO14522 1441 aa11.79□□□□□ -0.52
MSI2-209ENST00000579483 RAD50Q92878 1312 aa11.79□□□□□ -0.52
MSI2-209ENST00000579483 DEKP35659 375 aaKnown RBP11.79□□□□□ -0.52
MSI2-209ENST00000579483 TTC22Q5TAA0 569 aa11.79□□□□□ -0.52
MSI2-209ENST00000579483 ATP7BP35670 1465 aa11.79□□□□□ -0.52
MSI2-209ENST00000579483 HAND2P61296 217 aa11.78□□□□□ -0.52
MSI2-209ENST00000579483 RTN1Q16799 776 aa11.78□□□□□ -0.52
MSI2-209ENST00000579483 MAGEB6Q8N7X4 407 aa11.78□□□□□ -0.52
MSI2-209ENST00000579483 ZNF397Q8NF99 534 aaPredicted RBP11.78□□□□□ -0.52
MSI2-209ENST00000579483 AATKQ6ZMQ8 1374 aa11.78□□□□□ -0.52
MSI2-209ENST00000579483 IL6STP40189 918 aaPredicted RBP11.78□□□□□ -0.52
MSI2-209ENST00000579483 VPS36Q86VN1 386 aa11.78□□□□□ -0.52
MSI2-209ENST00000579483 CAGE1Q8TC20 777 aa11.78□□□□□ -0.52
MSI2-209ENST00000579483 RUFY1Q96T51 708 aa11.78□□□□□ -0.52
MSI2-209ENST00000579483 ORC3Q9UBD5 711 aaPredicted RBP11.78□□□□□ -0.52
MSI2-209ENST00000579483 AFF2P51816 1311 aa11.78□□□□□ -0.52
MSI2-209ENST00000579483 SPATA31A6Q5VVP1 1343 aa11.78□□□□□ -0.52
MSI2-209ENST00000579483 TNNT3P45378 269 aaPredicted RBP11.78□□□□□ -0.52
MSI2-209ENST00000579483 AS3MTQ9HBK9 375 aa11.78□□□□□ -0.52
MSI2-209ENST00000579483 LGR6Q9HBX8 967 aa11.78□□□□□ -0.52
MSI2-209ENST00000579483 SPATA31A3Q5VYP0 1347 aa11.78□□□□□ -0.52
MSI2-209ENST00000579483 KIF4AO95239 1232 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms