RNA–Protein interactions for RNA: ENST00000578630.1

ERBB2-208, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 874 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-208ENST00000578630 LARGE2Q8N3Y3 721 aa14.39□□□□□ -0.11
ERBB2-208ENST00000578630 ZNF594Q96JF6 807 aaPredicted RBP14.39□□□□□ -0.11
ERBB2-208ENST00000578630 ZC3H12CQ9C0D7 883 aaKnown RBP14.39□□□□□ -0.11
ERBB2-208ENST00000578630 LEMD3Q9Y2U8 911 aa14.39□□□□□ -0.11
ERBB2-208ENST00000578630 COG6Q9Y2V7 657 aa14.39□□□□□ -0.11
ERBB2-208ENST00000578630 XDHP47989 1333 aa14.39□□□□□ -0.11
ERBB2-208ENST00000578630 ZC3H4Q9UPT8 1303 aaKnown RBP14.39□□□□□ -0.11
ERBB2-208ENST00000578630 G3V3G9 751 aa14.38□□□□□ -0.11
ERBB2-208ENST00000578630 PPIP5K2O43314 1243 aa14.38□□□□□ -0.11
ERBB2-208ENST00000578630 DCAF8Q5TAQ9 597 aa14.38□□□□□ -0.11
ERBB2-208ENST00000578630 TBC1D16Q8TBP0 767 aa14.38□□□□□ -0.11
ERBB2-208ENST00000578630 POLLQ9UGP5 575 aa14.38□□□□□ -0.11
ERBB2-208ENST00000578630 LAMB2P55268 1798 aa14.37□□□□□ -0.11
ERBB2-208ENST00000578630 UFL1O94874 794 aa14.37□□□□□ -0.11
ERBB2-208ENST00000578630 KCNJ4P48050 445 aa14.37□□□□□ -0.11
ERBB2-208ENST00000578630 PRELPP51888 382 aa14.37□□□□□ -0.11
ERBB2-208ENST00000578630 CHRNDQ07001 517 aa14.37□□□□□ -0.11
ERBB2-208ENST00000578630 NIM1KQ8IY84 436 aa14.37□□□□□ -0.11
ERBB2-208ENST00000578630 UTRNP46939 3433 aa14.37□□□□□ -0.11
ERBB2-208ENST00000578630 CHD4Q14839 1912 aa14.37□□□□□ -0.11
ERBB2-208ENST00000578630 RIMBP2O15034 1052 aa14.36□□□□□ -0.11
ERBB2-208ENST00000578630 SRGAP3O43295 1099 aa14.36□□□□□ -0.11
ERBB2-208ENST00000578630 RRP1P56182 461 aaKnown RBP14.36□□□□□ -0.11
ERBB2-208ENST00000578630 EIF6P56537 245 aaKnown RBP14.36□□□□□ -0.11
ERBB2-208ENST00000578630 ATP8B2P98198 1209 aa14.36□□□□□ -0.11
ERBB2-208ENST00000578630 KIAA2012Q0VF49 1180 aa14.36□□□□□ -0.11
ERBB2-208ENST00000578630 AOC3Q16853 763 aa14.36□□□□□ -0.11
ERBB2-208ENST00000578630 FBXO3Q9UK99 471 aa14.36□□□□□ -0.11
ERBB2-208ENST00000578630 MYH3P11055 1940 aa14.36□□□□□ -0.11
ERBB2-208ENST00000578630 MROH5Q6ZUA9 1318 aa14.36□□□□□ -0.11
ERBB2-208ENST00000578630 EYA2O00167 538 aa14.35□□□□□ -0.11
ERBB2-208ENST00000578630 RFX5P48382 616 aaPredicted RBP14.35□□□□□ -0.11
ERBB2-208ENST00000578630 PTPN12Q05209 780 aaKnown RBP14.35□□□□□ -0.11
ERBB2-208ENST00000578630 MTX1Q13505 466 aa14.35□□□□□ -0.11
ERBB2-208ENST00000578630 SLC51AQ86UW1 340 aa14.35□□□□□ -0.11
ERBB2-208ENST00000578630 RIPOR2Q9Y4F9 1068 aa14.35□□□□□ -0.11
ERBB2-208ENST00000578630 TAF1P21675 1872 aa14.35□□□□□ -0.11
ERBB2-208ENST00000578630 CACNA1SQ13698 1873 aa14.35□□□□□ -0.11
ERBB2-208ENST00000578630 KDM2BQ8NHM5 1336 aa14.35□□□□□ -0.11
ERBB2-208ENST00000578630 SNED1Q8TER0 1413 aa14.34□□□□□ -0.11
ERBB2-208ENST00000578630 FER1L6Q2WGJ9 1857 aa14.34□□□□□ -0.11
ERBB2-208ENST00000578630 GLTPD2A6NH11 291 aa14.34□□□□□ -0.11
ERBB2-208ENST00000578630 FZD9O00144 591 aa14.34□□□□□ -0.11
ERBB2-208ENST00000578630 TAF5LO75529 589 aa14.34□□□□□ -0.11
ERBB2-208ENST00000578630 METTL24Q5JXM2 366 aa14.34□□□□□ -0.11
ERBB2-208ENST00000578630 C20orf194Q5TEA3 1177 aa14.34□□□□□ -0.11
ERBB2-208ENST00000578630 HELBQ8NG08 1087 aaPredicted RBP14.34□□□□□ -0.11
ERBB2-208ENST00000578630 KLHDC4Q8TBB5 520 aa14.34□□□□□ -0.11
ERBB2-208ENST00000578630 PUS3Q9BZE2 481 aaKnown RBP14.34□□□□□ -0.11
ERBB2-208ENST00000578630 COPRSQ9NQ92 184 aa14.34□□□□□ -0.11
ERBB2-208ENST00000578630 ZNRF3Q9ULT6 936 aa14.34□□□□□ -0.11
ERBB2-208ENST00000578630 ZNF804BA4D1E1 1349 aa14.34□□□□□ -0.11
ERBB2-208ENST00000578630 CIAO1O76071 339 aa14.33□□□□□ -0.12
ERBB2-208ENST00000578630 LRRC24Q50LG9 513 aa14.33□□□□□ -0.12
ERBB2-208ENST00000578630 RPAP2Q8IXW5 612 aaPredicted RBP14.33□□□□□ -0.12
ERBB2-208ENST00000578630 GPBP1L1Q9HC44 474 aaPredicted RBP14.33□□□□□ -0.12
ERBB2-208ENST00000578630 ZBTB40Q9NUA8 1239 aa14.33□□□□□ -0.12
ERBB2-208ENST00000578630 CEP126Q9P2H0 1117 aa14.33□□□□□ -0.12
ERBB2-208ENST00000578630 IL15P40933 162 aaPredicted RBP14.32□□□□□ -0.12
ERBB2-208ENST00000578630 G3BP1Q13283 466 aaKnown RBP eCLIP14.32□□□□□ -0.12
ERBB2-208ENST00000578630 UBE4AQ14139 1066 aa14.32□□□□□ -0.12
ERBB2-208ENST00000578630 TNIP1Q15025 636 aa14.32□□□□□ -0.12
ERBB2-208ENST00000578630 ZNF784Q8NCA9 323 aaPredicted RBP14.32□□□□□ -0.12
ERBB2-208ENST00000578630 SIL1Q9H173 461 aa14.32□□□□□ -0.12
ERBB2-208ENST00000578630 C1orf115Q9H7X2 142 aa14.32□□□□□ -0.12
ERBB2-208ENST00000578630 PDE8BO95263 885 aa14.31□□□□□ -0.12
ERBB2-208ENST00000578630 DOK7Q18PE1 504 aa14.31□□□□□ -0.12
ERBB2-208ENST00000578630 PODNQ7Z5L7 613 aa14.31□□□□□ -0.12
ERBB2-208ENST00000578630 ZNF526Q8TF50 670 aaPredicted RBP14.31□□□□□ -0.12
ERBB2-208ENST00000578630 GPR101Q96P66 508 aaPredicted RBP14.31□□□□□ -0.12
ERBB2-208ENST00000578630 SUPT16HQ9Y5B9 1047 aaKnown RBP14.31□□□□□ -0.12
ERBB2-208ENST00000578630 SBF1O95248 1867 aa14.31□□□□□ -0.12
ERBB2-208ENST00000578630 PNMA6EA0A0J9YXQ4 647 aa14.3□□□□□ -0.12
ERBB2-208ENST00000578630 HMMRO75330 724 aa14.3□□□□□ -0.12
ERBB2-208ENST00000578630 CIAPIN1Q6FI81 312 aa14.3□□□□□ -0.12
ERBB2-208ENST00000578630 C15orf52Q6ZUT6 534 aaKnown RBP14.3□□□□□ -0.12
ERBB2-208ENST00000578630 SSH3Q8TE77 659 aa14.3□□□□□ -0.12
ERBB2-208ENST00000578630 COA1Q9GZY4 146 aa14.3□□□□□ -0.12
ERBB2-208ENST00000578630 DBNDD1Q9H9R9 158 aa14.3□□□□□ -0.12
ERBB2-208ENST00000578630 PA2G4Q9UQ80 394 aaKnown RBP14.3□□□□□ -0.12
ERBB2-208ENST00000578630 WTIPA6NIX2 430 aaPredicted RBP14.29□□□□□ -0.12
ERBB2-208ENST00000578630 ECE2O60344 883 aa14.29□□□□□ -0.12
ERBB2-208ENST00000578630 SURF6O75683 361 aaKnown RBP14.29□□□□□ -0.12
ERBB2-208ENST00000578630 DDNO94850 711 aaPredicted RBP14.29□□□□□ -0.12
ERBB2-208ENST00000578630 IFIT1P09914 478 aaKnown RBP14.29□□□□□ -0.12
ERBB2-208ENST00000578630 CXCL9Q07325 125 aa14.29□□□□□ -0.12
ERBB2-208ENST00000578630 POLA2Q14181 598 aa14.29□□□□□ -0.12
ERBB2-208ENST00000578630 CEP85Q6P2H3 762 aa14.29□□□□□ -0.12
ERBB2-208ENST00000578630 ATG9AQ7Z3C6 839 aa14.29□□□□□ -0.12
ERBB2-208ENST00000578630 GPC2Q8N158 579 aa14.29□□□□□ -0.12
ERBB2-208ENST00000578630 GJA3Q9Y6H8 435 aa14.29□□□□□ -0.12
ERBB2-208ENST00000578630 MED23Q9ULK4 1368 aa14.29□□□□□ -0.12
ERBB2-208ENST00000578630 SNAP23O00161 211 aa14.28□□□□□ -0.12
ERBB2-208ENST00000578630 RAD17O75943 681 aa14.28□□□□□ -0.12
ERBB2-208ENST00000578630 COL4A1P02462 1669 aa14.28□□□□□ -0.12
ERBB2-208ENST00000578630 VEGFAP15692 232 aaPredicted RBP14.28□□□□□ -0.12
ERBB2-208ENST00000578630 OS9Q13438 667 aaPredicted RBP14.28□□□□□ -0.12
ERBB2-208ENST00000578630 PUM3Q15397 648 aaKnown RBP14.28□□□□□ -0.12
ERBB2-208ENST00000578630 CCDC88AQ3V6T2 1871 aa14.28□□□□□ -0.12
ERBB2-208ENST00000578630 CAVIN4Q5BKX8 364 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms