RNA–Protein interactions for RNA: ENST00000578557.1

PPP4R1-210, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 4

Gene PPP4R1, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-210	ENST00000578557	BSDC1	Q9NW68	430 aa	Predicted RBP	10.82	□□□□□ -0.68
PPP4R1-210	ENST00000578557	UTY	O14607	1347 aa		10.82	□□□□□ -0.68
PPP4R1-210	ENST00000578557	KIF13B	Q9NQT8	1826 aa		10.81	□□□□□ -0.68
PPP4R1-210	ENST00000578557	NFKBIE	O00221	500 aa		10.81	□□□□□ -0.68
PPP4R1-210	ENST00000578557	GRM8	O00222	908 aa		10.81	□□□□□ -0.68
PPP4R1-210	ENST00000578557	VEGFA	P15692	232 aa	Predicted RBP	10.81	□□□□□ -0.68
PPP4R1-210	ENST00000578557	IGHMBP2	P38935	993 aa	Known RBP	10.81	□□□□□ -0.68
PPP4R1-210	ENST00000578557	RARS	P54136	660 aa	Known RBP	10.81	□□□□□ -0.68
PPP4R1-210	ENST00000578557	CTSW	P56202	376 aa		10.81	□□□□□ -0.68
PPP4R1-210	ENST00000578557	TTLL11	Q8NHH1	800 aa		10.81	□□□□□ -0.68
PPP4R1-210	ENST00000578557	CDCA7L	Q96GN5	454 aa		10.81	□□□□□ -0.68
PPP4R1-210	ENST00000578557	ANKRD2	Q9GZV1	360 aa		10.81	□□□□□ -0.68
PPP4R1-210	ENST00000578557	CHMP4B	Q9H444	224 aa	Known RBP	10.81	□□□□□ -0.68
PPP4R1-210	ENST00000578557	METRN	Q9UJH8	293 aa		10.81	□□□□□ -0.68
PPP4R1-210	ENST00000578557	ABCC4	O15439	1325 aa		10.81	□□□□□ -0.68
PPP4R1-210	ENST00000578557	ABCC12	Q96J65	1359 aa		10.8	□□□□□ -0.68
PPP4R1-210	ENST00000578557	FZD9	O00144	591 aa		10.8	□□□□□ -0.68
PPP4R1-210	ENST00000578557	IARS	P41252	1262 aa	Known RBP	10.8	□□□□□ -0.68
PPP4R1-210	ENST00000578557	EIF6	P56537	245 aa	Known RBP	10.8	□□□□□ -0.68
PPP4R1-210	ENST00000578557	TNIP1	Q15025	636 aa		10.8	□□□□□ -0.68
PPP4R1-210	ENST00000578557	C16orf71	Q8IYS4	520 aa	Predicted RBP	10.8	□□□□□ -0.68
PPP4R1-210	ENST00000578557	EFCAB3	Q8N7B9	438 aa		10.8	□□□□□ -0.68
PPP4R1-210	ENST00000578557	MPHOSPH8	Q99549	860 aa		10.8	□□□□□ -0.68
PPP4R1-210	ENST00000578557	LEMD3	Q9Y2U8	911 aa		10.8	□□□□□ -0.68
PPP4R1-210	ENST00000578557	VIRMA	Q69YN4	1812 aa	Known RBP	10.79	□□□□□ -0.68
PPP4R1-210	ENST00000578557	ANKRD18B	A2A2Z9	1011 aa		10.79	□□□□□ -0.68
PPP4R1-210	ENST00000578557	TCERG1	O14776	1098 aa	Known RBP	10.79	□□□□□ -0.68
PPP4R1-210	ENST00000578557	TOMM70	O94826	608 aa		10.79	□□□□□ -0.68
PPP4R1-210	ENST00000578557	GNAI3	P08754	354 aa		10.79	□□□□□ -0.68
PPP4R1-210	ENST00000578557	ATP2B4	P23634	1241 aa		10.79	□□□□□ -0.68
PPP4R1-210	ENST00000578557	KIAA2012	Q0VF49	1180 aa		10.79	□□□□□ -0.68
PPP4R1-210	ENST00000578557	IFIT5	Q13325	482 aa	Known RBP	10.79	□□□□□ -0.68
PPP4R1-210	ENST00000578557	CCDC57	Q2TAC2	916 aa		10.79	□□□□□ -0.68
PPP4R1-210	ENST00000578557	CWF19L2	Q2TBE0	894 aa	Known RBP	10.79	□□□□□ -0.68
PPP4R1-210	ENST00000578557	SLC4A10	Q6U841	1118 aa		10.79	□□□□□ -0.68
PPP4R1-210	ENST00000578557	UBE3B	Q7Z3V4	1068 aa		10.79	□□□□□ -0.68
PPP4R1-210	ENST00000578557	GPC2	Q8N158	579 aa		10.79	□□□□□ -0.68
PPP4R1-210	ENST00000578557	ZC3H12C	Q9C0D7	883 aa	Known RBP	10.79	□□□□□ -0.68
PPP4R1-210	ENST00000578557	BCOR	Q6W2J9	1755 aa		10.78	□□□□□ -0.68
PPP4R1-210	ENST00000578557	CASP7	P55210	303 aa		10.78	□□□□□ -0.68
PPP4R1-210	ENST00000578557	FSTL1	Q12841	308 aa		10.78	□□□□□ -0.68
PPP4R1-210	ENST00000578557	WASHC4	Q2M389	1173 aa		10.78	□□□□□ -0.68
PPP4R1-210	ENST00000578557	PNMA8A	Q86V59	439 aa	Predicted RBP	10.78	□□□□□ -0.68
PPP4R1-210	ENST00000578557	NIM1K	Q8IY84	436 aa		10.78	□□□□□ -0.68
PPP4R1-210	ENST00000578557	LARGE2	Q8N3Y3	721 aa		10.78	□□□□□ -0.68
PPP4R1-210	ENST00000578557	L3MBTL3	Q96JM7	780 aa	Predicted RBP	10.78	□□□□□ -0.68
PPP4R1-210	ENST00000578557	WWC3	Q9ULE0	1092 aa		10.78	□□□□□ -0.68
PPP4R1-210	ENST00000578557	ZNRF3	Q9ULT6	936 aa		10.78	□□□□□ -0.68
PPP4R1-210	ENST00000578557	NSFL1C	Q9UNZ2	370 aa	Known RBP	10.78	□□□□□ -0.68
PPP4R1-210	ENST00000578557	SENP3-EIF4A1	A0A087X0R7	540 aa		10.77	□□□□□ -0.69
PPP4R1-210	ENST00000578557	IRX5	P78411	483 aa	Predicted RBP	10.77	□□□□□ -0.69
PPP4R1-210	ENST00000578557	INTS3	Q68E01	1043 aa	Known RBP	10.77	□□□□□ -0.69
PPP4R1-210	ENST00000578557	PODN	Q7Z5L7	613 aa		10.77	□□□□□ -0.69
PPP4R1-210	ENST00000578557	ANKIB1	Q9P2G1	1089 aa		10.77	□□□□□ -0.69
PPP4R1-210	ENST00000578557	GGA1	Q9UJY5	639 aa		10.77	□□□□□ -0.69
PPP4R1-210	ENST00000578557	NOB1	Q9ULX3	412 aa	Known RBP	10.77	□□□□□ -0.69
PPP4R1-210	ENST00000578557	XDH	P47989	1333 aa		10.77	□□□□□ -0.69
PPP4R1-210	ENST00000578557		F6X3S4	739 aa		10.76	□□□□□ -0.69
PPP4R1-210	ENST00000578557		G3V3G9	751 aa		10.76	□□□□□ -0.69
PPP4R1-210	ENST00000578557	SEC24B	O95487	1268 aa		10.76	□□□□□ -0.69
PPP4R1-210	ENST00000578557	ITGA6	P23229	1130 aa		10.76	□□□□□ -0.69
PPP4R1-210	ENST00000578557	TAF7L	Q5H9L4	462 aa		10.76	□□□□□ -0.69
PPP4R1-210	ENST00000578557	RTL5	Q5HYW3	569 aa	Predicted RBP	10.76	□□□□□ -0.69
PPP4R1-210	ENST00000578557	ZKSCAN2	Q63HK3	967 aa		10.76	□□□□□ -0.69
PPP4R1-210	ENST00000578557	ATF7IP	Q6VMQ6	1270 aa		10.76	□□□□□ -0.69
PPP4R1-210	ENST00000578557	C3orf67	Q6ZVT6	689 aa		10.76	□□□□□ -0.69
PPP4R1-210	ENST00000578557	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	10.76	□□□□□ -0.69
PPP4R1-210	ENST00000578557	RBM46	Q8TBY0	533 aa	Known RBP	10.76	□□□□□ -0.69
PPP4R1-210	ENST00000578557	C6orf229	H3BNL8	230 aa		10.75	□□□□□ -0.69
PPP4R1-210	ENST00000578557	PPIP5K2	O43314	1243 aa		10.75	□□□□□ -0.69
PPP4R1-210	ENST00000578557	RPS12	P25398	132 aa	Known RBP	10.75	□□□□□ -0.69
PPP4R1-210	ENST00000578557	RASSF7	Q02833	373 aa		10.75	□□□□□ -0.69
PPP4R1-210	ENST00000578557	RABL6	Q3YEC7	729 aa	Predicted RBP	10.75	□□□□□ -0.69
PPP4R1-210	ENST00000578557	C15orf52	Q6ZUT6	534 aa	Known RBP	10.75	□□□□□ -0.69
PPP4R1-210	ENST00000578557	CELF1	Q92879	486 aa	Known RBP	10.75	□□□□□ -0.69
PPP4R1-210	ENST00000578557	OCEL1	Q9H607	264 aa		10.75	□□□□□ -0.69
PPP4R1-210	ENST00000578557	ZNF277	Q9NRM2	450 aa	Predicted RBP	10.75	□□□□□ -0.69
PPP4R1-210	ENST00000578557	MINPP1	Q9UNW1	487 aa		10.75	□□□□□ -0.69
PPP4R1-210	ENST00000578557	UBTFL1	P0CB47	393 aa	Predicted RBP	10.74	□□□□□ -0.69
PPP4R1-210	ENST00000578557	PLCG2	P16885	1265 aa		10.74	□□□□□ -0.69
PPP4R1-210	ENST00000578557	LMOD1	P29536	600 aa	Predicted RBP	10.74	□□□□□ -0.69
PPP4R1-210	ENST00000578557	C1QTNF8	P60827	252 aa		10.74	□□□□□ -0.69
PPP4R1-210	ENST00000578557	FOXO4	P98177	505 aa		10.74	□□□□□ -0.69
PPP4R1-210	ENST00000578557	LMBR1L	Q6UX01	489 aa		10.74	□□□□□ -0.69
PPP4R1-210	ENST00000578557	LDHAL6A	Q6ZMR3	332 aa		10.74	□□□□□ -0.69
PPP4R1-210	ENST00000578557	TBC1D16	Q8TBP0	767 aa		10.74	□□□□□ -0.69
PPP4R1-210	ENST00000578557	DPF2	Q92785	391 aa		10.74	□□□□□ -0.69
PPP4R1-210	ENST00000578557	USP44	Q9H0E7	712 aa		10.74	□□□□□ -0.69
PPP4R1-210	ENST00000578557	GREM2	Q9H772	168 aa		10.74	□□□□□ -0.69
PPP4R1-210	ENST00000578557	USP50	Q70EL3	339 aa	Predicted RBP	10.73	□□□□□ -0.69
PPP4R1-210	ENST00000578557	SMC1B	Q8NDV3	1235 aa		10.73	□□□□□ -0.69
PPP4R1-210	ENST00000578557	COA1	Q9GZY4	146 aa		10.73	□□□□□ -0.69
PPP4R1-210	ENST00000578557	SEC31B	Q9NQW1	1179 aa		10.73	□□□□□ -0.69
PPP4R1-210	ENST00000578557	HACL1	Q9UJ83	578 aa		10.73	□□□□□ -0.69
PPP4R1-210	ENST00000578557	COLQ	Q9Y215	455 aa	Predicted RBP	10.73	□□□□□ -0.69
PPP4R1-210	ENST00000578557	MROH5	Q6ZUA9	1318 aa		10.73	□□□□□ -0.69
PPP4R1-210	ENST00000578557	POTEF	A5A3E0	1075 aa		10.72	□□□□□ -0.69
PPP4R1-210	ENST00000578557	KIF3C	O14782	793 aa		10.72	□□□□□ -0.69
PPP4R1-210	ENST00000578557	UBE4A	Q14139	1066 aa		10.72	□□□□□ -0.69
PPP4R1-210	ENST00000578557	CIAPIN1	Q6FI81	312 aa		10.72	□□□□□ -0.69

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