RNA–Protein interactions for RNA: ENST00000578348.5

GGA3-205, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2 BASIC

Gene GGA3, Length 2,251 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-205ENST00000578348 GIMAP6Q6P9H5 292 aa13.59□□□□□ -0.23
GGA3-205ENST00000578348 SASS6Q6UVJ0 657 aa13.59□□□□□ -0.23
GGA3-205ENST00000578348 NECAB1Q8N987 351 aa13.59□□□□□ -0.23
GGA3-205ENST00000578348 KCNB2Q92953 911 aa13.59□□□□□ -0.23
GGA3-205ENST00000578348 SPATA31A1Q5TZJ5 1347 aa13.58□□□□□ -0.23
GGA3-205ENST00000578348 CCDC171Q6TFL3 1326 aa13.58□□□□□ -0.23
GGA3-205ENST00000578348 PCCAP05165 728 aaPredicted RBP13.58□□□□□ -0.24
GGA3-205ENST00000578348 CYP19A1P11511 503 aaPredicted RBP13.58□□□□□ -0.24
GGA3-205ENST00000578348 ST3GAL1Q11201 340 aa13.58□□□□□ -0.24
GGA3-205ENST00000578348 NECTIN1Q15223 517 aa13.58□□□□□ -0.24
GGA3-205ENST00000578348 ATG9AQ7Z3C6 839 aa13.58□□□□□ -0.24
GGA3-205ENST00000578348 ZSCAN31Q96LW9 406 aaPredicted RBP13.58□□□□□ -0.24
GGA3-205ENST00000578348 FAM227BQ96M60 508 aa13.58□□□□□ -0.24
GGA3-205ENST00000578348 SH2B1Q9NRF2 756 aaPredicted RBP13.58□□□□□ -0.24
GGA3-205ENST00000578348 RBM8AQ9Y5S9 174 aaKnown RBP13.58□□□□□ -0.24
GGA3-205ENST00000578348 MED23Q9ULK4 1368 aa13.57□□□□□ -0.24
GGA3-205ENST00000578348 HSP90AB3PQ58FF7 597 aa13.57□□□□□ -0.24
GGA3-205ENST00000578348 PLA2G12BQ9BX93 195 aa13.57□□□□□ -0.24
GGA3-205ENST00000578348 TM6SF1Q9BZW5 370 aa13.57□□□□□ -0.24
GGA3-205ENST00000578348 TTC12Q9H892 705 aaPredicted RBP13.57□□□□□ -0.24
GGA3-205ENST00000578348 ZNF330Q9Y3S2 320 aaPredicted RBP13.57□□□□□ -0.24
GGA3-205ENST00000578348 EYA2O00167 538 aa13.57□□□□□ -0.24
GGA3-205ENST00000578348 CREB3L3Q68CJ9 461 aa13.57□□□□□ -0.24
GGA3-205ENST00000578348 GIGYF2Q6Y7W6 1299 aaKnown RBP13.57□□□□□ -0.24
GGA3-205ENST00000578348 DBNDD2Q9BQY9 259 aa13.57□□□□□ -0.24
GGA3-205ENST00000578348 ZNF609O15014 1411 aa13.56□□□□□ -0.24
GGA3-205ENST00000578348 ADAMTS2O95450 1211 aa13.56□□□□□ -0.24
GGA3-205ENST00000578348 SLC4A9Q96Q91 983 aa13.56□□□□□ -0.24
GGA3-205ENST00000578348 HAUS7Q99871 368 aa13.56□□□□□ -0.24
GGA3-205ENST00000578348 FBXO3Q9UK99 471 aa13.56□□□□□ -0.24
GGA3-205ENST00000578348 TPCN1Q9ULQ1 816 aa13.56□□□□□ -0.24
GGA3-205ENST00000578348 JCADQ9P266 1359 aa13.56□□□□□ -0.24
GGA3-205ENST00000578348 KDM4AO75164 1064 aa13.56□□□□□ -0.24
GGA3-205ENST00000578348 COL9A3Q14050 684 aaPredicted RBP13.56□□□□□ -0.24
GGA3-205ENST00000578348 ZBTB38Q8NAP3 1195 aaPredicted RBP13.56□□□□□ -0.24
GGA3-205ENST00000578348 CICQ96RK0 1608 aaPredicted RBP13.55□□□□□ -0.24
GGA3-205ENST00000578348 CDHR2Q9BYE9 1310 aa13.55□□□□□ -0.24
GGA3-205ENST00000578348 A0A0D9SFI3 127 aa13.55□□□□□ -0.24
GGA3-205ENST00000578348 DYNC1I1O14576 645 aa13.55□□□□□ -0.24
GGA3-205ENST00000578348 LARP1BQ659C4 914 aaKnown RBP13.55□□□□□ -0.24
GGA3-205ENST00000578348 PIBF1Q8WXW3 757 aa13.55□□□□□ -0.24
GGA3-205ENST00000578348 MAP4K1Q92918 833 aa13.55□□□□□ -0.24
GGA3-205ENST00000578348 FUCA2Q9BTY2 467 aa13.55□□□□□ -0.24
GGA3-205ENST00000578348 DDB1Q16531 1140 aa13.55□□□□□ -0.24
GGA3-205ENST00000578348 FERMT3Q86UX7 667 aa13.55□□□□□ -0.24
GGA3-205ENST00000578348 TICAM2Q86XR7 235 aa13.55□□□□□ -0.24
GGA3-205ENST00000578348 C17orf53Q8N3J3 647 aaPredicted RBP13.55□□□□□ -0.24
GGA3-205ENST00000578348 SYTL4Q96C24 671 aaPredicted RBP13.55□□□□□ -0.24
GGA3-205ENST00000578348 TCEANC2Q96MN5 208 aa13.55□□□□□ -0.24
GGA3-205ENST00000578348 SLIT2O94813 1529 aa13.54□□□□□ -0.24
GGA3-205ENST00000578348 SLC27A2O14975 620 aa13.54□□□□□ -0.24
GGA3-205ENST00000578348 CCDC57Q2TAC2 916 aa13.54□□□□□ -0.24
GGA3-205ENST00000578348 ZBTB1Q9Y2K1 713 aa13.54□□□□□ -0.24
GGA3-205ENST00000578348 SPEF2Q9C093 1822 aa13.54□□□□□ -0.24
GGA3-205ENST00000578348 SPATA31A5Q5VU36 1347 aa13.54□□□□□ -0.24
GGA3-205ENST00000578348 SPATA31A7Q8IWB4 1347 aa13.54□□□□□ -0.24
GGA3-205ENST00000578348 RREB1Q92766 1687 aa13.54□□□□□ -0.24
GGA3-205ENST00000578348 IL6STP40189 918 aaPredicted RBP13.53□□□□□ -0.24
GGA3-205ENST00000578348 NOLC1Q14978 699 aaKnown RBP eCLIP13.53□□□□□ -0.245e-6■□□□□ 9.2
GGA3-205ENST00000578348 FAM173BQ6P4H8 233 aa13.53□□□□□ -0.24
GGA3-205ENST00000578348 CDC37L1Q7L3B6 337 aa13.53□□□□□ -0.24
GGA3-205ENST00000578348 PALLDQ8WX93 1383 aa13.53□□□□□ -0.24
GGA3-205ENST00000578348 ERVV-1B6SEH8 477 aa13.53□□□□□ -0.24
GGA3-205ENST00000578348 CSF1RP07333 972 aa13.53□□□□□ -0.24
GGA3-205ENST00000578348 PSMA5P28066 241 aa13.53□□□□□ -0.24
GGA3-205ENST00000578348 LRRC24Q50LG9 513 aa13.53□□□□□ -0.24
GGA3-205ENST00000578348 NLRP10Q86W26 655 aa13.53□□□□□ -0.24
GGA3-205ENST00000578348 EDC3Q96F86 508 aaKnown RBP13.53□□□□□ -0.24
GGA3-205ENST00000578348 ZNF594Q96JF6 807 aaPredicted RBP13.53□□□□□ -0.24
GGA3-205ENST00000578348 NUP98P52948 1817 aa13.52□□□□□ -0.24
GGA3-205ENST00000578348 TOM1O60784 492 aa13.52□□□□□ -0.24
GGA3-205ENST00000578348 KRT85P78386 507 aa13.52□□□□□ -0.24
GGA3-205ENST00000578348 HLFQ16534 295 aa13.52□□□□□ -0.24
GGA3-205ENST00000578348 RNF20Q5VTR2 975 aa13.52□□□□□ -0.24
GGA3-205ENST00000578348 BARGINQ6ZT62 677 aa13.52□□□□□ -0.24
GGA3-205ENST00000578348 TTC6Q86TZ1 520 aa13.52□□□□□ -0.24
GGA3-205ENST00000578348 NEUROD6Q96NK8 337 aa13.52□□□□□ -0.24
GGA3-205ENST00000578348 MAP7D2Q96T17 732 aa13.52□□□□□ -0.24
GGA3-205ENST00000578348 DNAJC2Q99543 621 aaKnown RBP13.52□□□□□ -0.24
GGA3-205ENST00000578348 ARID3AQ99856 593 aa13.52□□□□□ -0.24
GGA3-205ENST00000578348 AP5Z1O43299 807 aa13.52□□□□□ -0.25
GGA3-205ENST00000578348 BLOC1S2Q6QNY1 142 aa13.52□□□□□ -0.25
GGA3-205ENST00000578348 KBTBD3Q8NAB2 608 aa13.52□□□□□ -0.25
GGA3-205ENST00000578348 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.52□□□□□ -0.25
GGA3-205ENST00000578348 FAM89AQ96GI7 184 aa13.52□□□□□ -0.25
GGA3-205ENST00000578348 CEP126Q9P2H0 1117 aa13.52□□□□□ -0.25
GGA3-205ENST00000578348 TAF6LQ9Y6J9 622 aa13.52□□□□□ -0.25
GGA3-205ENST00000578348 CCDC192P0DO97 292 aa13.51□□□□□ -0.25
GGA3-205ENST00000578348 HMG20BQ9P0W2 317 aa13.51□□□□□ -0.25
GGA3-205ENST00000578348 MYH3P11055 1940 aa13.51□□□□□ -0.25
GGA3-205ENST00000578348 A0A1B0GUL7 405 aa13.51□□□□□ -0.25
GGA3-205ENST00000578348 NUTM2BA6NNL0 878 aaPredicted RBP13.51□□□□□ -0.25
GGA3-205ENST00000578348 NUTM2EB1AL46 878 aaPredicted RBP13.51□□□□□ -0.25
GGA3-205ENST00000578348 STK3Q13188 491 aa13.51□□□□□ -0.25
GGA3-205ENST00000578348 IFIT5Q13325 482 aaKnown RBP13.51□□□□□ -0.25
GGA3-205ENST00000578348 CAMK4Q16566 473 aa13.51□□□□□ -0.25
GGA3-205ENST00000578348 ZNF589Q86UQ0 364 aaPredicted RBP13.51□□□□□ -0.25
GGA3-205ENST00000578348 DZIP3Q86Y13 1208 aaKnown RBP13.51□□□□□ -0.25
GGA3-205ENST00000578348 NUTM2AQ8IVF1 878 aaPredicted RBP13.51□□□□□ -0.25
GGA3-205ENST00000578348 PUS3Q9BZE2 481 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms