RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-209	ENST00000578329	NEFM	P07197	916 aa		5.8	□□□□□ -1.48
PPP4R1-209	ENST00000578329	VIL1	P09327	827 aa	Known RBP	5.8	□□□□□ -1.48
PPP4R1-209	ENST00000578329	WDR43	Q15061	677 aa	Known RBP eCLIP	5.8	□□□□□ -1.48
PPP4R1-209	ENST00000578329	CCDC27	Q2M243	656 aa		5.8	□□□□□ -1.48
PPP4R1-209	ENST00000578329	GRIPAP1	Q4V328	841 aa		5.8	□□□□□ -1.48
PPP4R1-209	ENST00000578329	EPHA10	Q5JZY3	1008 aa		5.8	□□□□□ -1.48
PPP4R1-209	ENST00000578329	DDX46	Q7L014	1031 aa	Known RBP	5.8	□□□□□ -1.48
PPP4R1-209	ENST00000578329	MICALL2	Q8IY33	904 aa		5.8	□□□□□ -1.48
PPP4R1-209	ENST00000578329	PI4KAP1	Q8N8J0	262 aa		5.8	□□□□□ -1.48
PPP4R1-209	ENST00000578329	TTLL11	Q8NHH1	800 aa		5.8	□□□□□ -1.48
PPP4R1-209	ENST00000578329	CAPNS2	Q96L46	248 aa		5.8	□□□□□ -1.48
PPP4R1-209	ENST00000578329	CCDC85A	Q96PX6	553 aa	Predicted RBP	5.8	□□□□□ -1.48
PPP4R1-209	ENST00000578329	PRDM10	Q9NQV6	1147 aa		5.8	□□□□□ -1.48
PPP4R1-209	ENST00000578329	CNOT7	Q9UIV1	285 aa	Known RBP	5.8	□□□□□ -1.48
PPP4R1-209	ENST00000578329	TSKS	Q9UJT2	592 aa		5.8	□□□□□ -1.48
PPP4R1-209	ENST00000578329	NSFL1C	Q9UNZ2	370 aa	Known RBP	5.8	□□□□□ -1.48
PPP4R1-209	ENST00000578329	SCAF8	Q9UPN6	1271 aa	Known RBP	5.8	□□□□□ -1.48
PPP4R1-209	ENST00000578329	CLEC11A	Q9Y240	323 aa		5.8	□□□□□ -1.48
PPP4R1-209	ENST00000578329	MAP3K2	Q9Y2U5	619 aa		5.8	□□□□□ -1.48
PPP4R1-209	ENST00000578329	TNRC18	O15417	2968 aa	Predicted RBP	5.8	□□□□□ -1.48
PPP4R1-209	ENST00000578329	ZNF521	Q96K83	1311 aa		5.79	□□□□□ -1.48
PPP4R1-209	ENST00000578329	CDHR2	Q9BYE9	1310 aa		5.79	□□□□□ -1.48
PPP4R1-209	ENST00000578329	NEURL1B	A8MQ27	555 aa		5.79	□□□□□ -1.48
PPP4R1-209	ENST00000578329	VAMP4	O75379	141 aa		5.79	□□□□□ -1.48
PPP4R1-209	ENST00000578329	ZNF280A	P59817	542 aa	Predicted RBP	5.79	□□□□□ -1.48
PPP4R1-209	ENST00000578329	GNAI1	P63096	354 aa		5.79	□□□□□ -1.48
PPP4R1-209	ENST00000578329	WASHC4	Q2M389	1173 aa		5.79	□□□□□ -1.48
PPP4R1-209	ENST00000578329	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	5.79	□□□□□ -1.48
PPP4R1-209	ENST00000578329	KSR2	Q6VAB6	950 aa		5.79	□□□□□ -1.48
PPP4R1-209	ENST00000578329	USP48	Q86UV5	1035 aa		5.79	□□□□□ -1.48
PPP4R1-209	ENST00000578329	PIAS4	Q8N2W9	510 aa	Predicted RBP	5.79	□□□□□ -1.48
PPP4R1-209	ENST00000578329	CCDC191	Q8NCU4	936 aa		5.79	□□□□□ -1.48
PPP4R1-209	ENST00000578329	DPF2	Q92785	391 aa		5.79	□□□□□ -1.48
PPP4R1-209	ENST00000578329	KAZALD1	Q96I82	304 aa		5.79	□□□□□ -1.48
PPP4R1-209	ENST00000578329	GREM2	Q9H772	168 aa		5.79	□□□□□ -1.48
PPP4R1-209	ENST00000578329	MYH3	P11055	1940 aa		5.79	□□□□□ -1.48
PPP4R1-209	ENST00000578329	CASP8AP2	Q9UKL3	1982 aa		5.78	□□□□□ -1.48
PPP4R1-209	ENST00000578329	FANCI	Q9NVI1	1328 aa		5.78	□□□□□ -1.48
PPP4R1-209	ENST00000578329	PDE8A	O60658	829 aa		5.78	□□□□□ -1.48
PPP4R1-209	ENST00000578329	CELF2	O95319	508 aa	Known RBP	5.78	□□□□□ -1.48
PPP4R1-209	ENST00000578329	CSF1R	P07333	972 aa		5.78	□□□□□ -1.48
PPP4R1-209	ENST00000578329	CTSW	P56202	376 aa		5.78	□□□□□ -1.48
PPP4R1-209	ENST00000578329	FOXO4	P98177	505 aa		5.78	□□□□□ -1.48
PPP4R1-209	ENST00000578329	DACT2	Q5SW24	774 aa		5.78	□□□□□ -1.48
PPP4R1-209	ENST00000578329	MOB2	Q70IA6	237 aa		5.78	□□□□□ -1.48
PPP4R1-209	ENST00000578329	RIC3	Q7Z5B4	369 aa		5.78	□□□□□ -1.48
PPP4R1-209	ENST00000578329	CERS5	Q8N5B7	392 aa		5.78	□□□□□ -1.48
PPP4R1-209	ENST00000578329	SUPT20H	Q8NEM7	779 aa		5.78	□□□□□ -1.48
PPP4R1-209	ENST00000578329	ZC3H15	Q8WU90	426 aa	Known RBP	5.78	□□□□□ -1.48
PPP4R1-209	ENST00000578329	ZBED3	Q96IU2	234 aa	Predicted RBP	5.78	□□□□□ -1.48
PPP4R1-209	ENST00000578329	MINPP1	Q9UNW1	487 aa		5.78	□□□□□ -1.48
PPP4R1-209	ENST00000578329	PCDHAC2	Q9Y5I4	1007 aa		5.78	□□□□□ -1.48
PPP4R1-209	ENST00000578329	SSC5D	A1L4H1	1573 aa		5.77	□□□□□ -1.49
PPP4R1-209	ENST00000578329		F6X3S4	739 aa		5.77	□□□□□ -1.49
PPP4R1-209	ENST00000578329	C6orf229	H3BNL8	230 aa		5.77	□□□□□ -1.49
PPP4R1-209	ENST00000578329	UFL1	O94874	794 aa		5.77	□□□□□ -1.49
PPP4R1-209	ENST00000578329	LMOD1	P29536	600 aa	Predicted RBP	5.77	□□□□□ -1.49
PPP4R1-209	ENST00000578329	CTCF	P49711	727 aa	Predicted RBP	5.77	□□□□□ -1.49
PPP4R1-209	ENST00000578329	GCKR	Q14397	625 aa		5.77	□□□□□ -1.49
PPP4R1-209	ENST00000578329	TWISTNB	Q3B726	338 aa	Predicted RBP	5.77	□□□□□ -1.49
PPP4R1-209	ENST00000578329	FAM161A	Q3B820	660 aa		5.77	□□□□□ -1.49
PPP4R1-209	ENST00000578329	PRAMEF18	Q5VWM3	479 aa		5.77	□□□□□ -1.49
PPP4R1-209	ENST00000578329	TMC4	Q7Z404	712 aa		5.77	□□□□□ -1.49
PPP4R1-209	ENST00000578329	HHIPL1	Q96JK4	782 aa		5.77	□□□□□ -1.49
PPP4R1-209	ENST00000578329	PLA2G12B	Q9BX93	195 aa		5.77	□□□□□ -1.49
PPP4R1-209	ENST00000578329	CWC25	Q9NXE8	425 aa	Predicted RBP	5.77	□□□□□ -1.49
PPP4R1-209	ENST00000578329	ABT1	Q9ULW3	272 aa	Known RBP	5.77	□□□□□ -1.49
PPP4R1-209	ENST00000578329	HTT	P42858	3142 aa		5.77	□□□□□ -1.49
PPP4R1-209	ENST00000578329	IL16	Q14005	1332 aa		5.76	□□□□□ -1.49
PPP4R1-209	ENST00000578329	PAPPA2	Q9BXP8	1791 aa		5.76	□□□□□ -1.49
PPP4R1-209	ENST00000578329	SLC4A2	P04920	1241 aa		5.76	□□□□□ -1.49
PPP4R1-209	ENST00000578329	CAP1	Q01518	475 aa		5.76	□□□□□ -1.49
PPP4R1-209	ENST00000578329	EXOSC9	Q06265	439 aa	Known RBP	5.76	□□□□□ -1.49
PPP4R1-209	ENST00000578329	GOLGA2	Q08379	1002 aa		5.76	□□□□□ -1.49
PPP4R1-209	ENST00000578329	FLII	Q13045	1269 aa		5.76	□□□□□ -1.49
PPP4R1-209	ENST00000578329	TNIP1	Q15025	636 aa		5.76	□□□□□ -1.49
PPP4R1-209	ENST00000578329	NBPF9	Q3BBW0	867 aa		5.76	□□□□□ -1.49
PPP4R1-209	ENST00000578329	NCBP3	Q53F19	620 aa	Known RBP	5.76	□□□□□ -1.49
PPP4R1-209	ENST00000578329	BEND3	Q5T5X7	828 aa		5.76	□□□□□ -1.49
PPP4R1-209	ENST00000578329	RBM26	Q5T8P6	1007 aa	Known RBP	5.76	□□□□□ -1.49
PPP4R1-209	ENST00000578329	CCDC30	Q5VVM6	783 aa		5.76	□□□□□ -1.49
PPP4R1-209	ENST00000578329	RSBN1L	Q6PCB5	846 aa	Predicted RBP	5.76	□□□□□ -1.49
PPP4R1-209	ENST00000578329	CDC37L1	Q7L3B6	337 aa		5.76	□□□□□ -1.49
PPP4R1-209	ENST00000578329	UBE3B	Q7Z3V4	1068 aa		5.76	□□□□□ -1.49
PPP4R1-209	ENST00000578329	ABHD8	Q96I13	439 aa		5.76	□□□□□ -1.49
PPP4R1-209	ENST00000578329	R3HDML	Q9H3Y0	253 aa		5.76	□□□□□ -1.49
PPP4R1-209	ENST00000578329	BSDC1	Q9NW68	430 aa	Predicted RBP	5.76	□□□□□ -1.49
PPP4R1-209	ENST00000578329	GGA3	Q9NZ52	723 aa		5.76	□□□□□ -1.49
PPP4R1-209	ENST00000578329	XDH	P47989	1333 aa		5.75	□□□□□ -1.49
PPP4R1-209	ENST00000578329	RPS12	P25398	132 aa	Known RBP	5.75	□□□□□ -1.49
PPP4R1-209	ENST00000578329	MAP2K2	P36507	400 aa		5.75	□□□□□ -1.49
PPP4R1-209	ENST00000578329	CCT4	P50991	539 aa	Known RBP	5.75	□□□□□ -1.49
PPP4R1-209	ENST00000578329	SCARF1	Q14162	830 aa		5.75	□□□□□ -1.49
PPP4R1-209	ENST00000578329	GRIK5	Q16478	980 aa		5.75	□□□□□ -1.49
PPP4R1-209	ENST00000578329	KIF4B	Q2VIQ3	1234 aa		5.75	□□□□□ -1.49
PPP4R1-209	ENST00000578329	CCDC152	Q4G0S7	254 aa		5.75	□□□□□ -1.49
PPP4R1-209	ENST00000578329	ANGEL2	Q5VTE6	544 aa	Known RBP	5.75	□□□□□ -1.49
PPP4R1-209	ENST00000578329	KRT26	Q7Z3Y9	468 aa		5.75	□□□□□ -1.49
PPP4R1-209	ENST00000578329	CDAN1	Q8IWY9	1227 aa		5.75	□□□□□ -1.49
PPP4R1-209	ENST00000578329	CDCA5	Q96FF9	252 aa		5.75	□□□□□ -1.49

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