RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 RIC3Q7Z5B4 369 aa14.53□□□□□ -0.08
SMARCE1-214ENST00000578112 POLLQ9UGP5 575 aa14.53□□□□□ -0.08
SMARCE1-214ENST00000578112 C6orf229H3BNL8 230 aa14.53□□□□□ -0.08
SMARCE1-214ENST00000578112 AOC2O75106 756 aa14.53□□□□□ -0.08
SMARCE1-214ENST00000578112 ATP2B4P23634 1241 aa14.53□□□□□ -0.08
SMARCE1-214ENST00000578112 FAM89AQ96GI7 184 aa14.53□□□□□ -0.08
SMARCE1-214ENST00000578112 GGA1Q9UJY5 639 aa14.53□□□□□ -0.08
SMARCE1-214ENST00000578112 FMR1Q06787 632 aaKnown RBP eCLIP14.52□□□□□ -0.08
SMARCE1-214ENST00000578112 KIF4BQ2VIQ3 1234 aa14.52□□□□□ -0.08
SMARCE1-214ENST00000578112 KRT26Q7Z3Y9 468 aa14.52□□□□□ -0.08
SMARCE1-214ENST00000578112 USP48Q86UV5 1035 aa14.52□□□□□ -0.08
SMARCE1-214ENST00000578112 MBIPQ9NS73 344 aa14.52□□□□□ -0.08
SMARCE1-214ENST00000578112 HUNKP57058 714 aa14.52□□□□□ -0.09
SMARCE1-214ENST00000578112 SLC51AQ86UW1 340 aa14.52□□□□□ -0.09
SMARCE1-214ENST00000578112 CWC25Q9NXE8 425 aaPredicted RBP14.52□□□□□ -0.09
SMARCE1-214ENST00000578112 LAS1LQ9Y4W2 734 aaKnown RBP14.52□□□□□ -0.09
SMARCE1-214ENST00000578112 XDHP47989 1333 aa14.52□□□□□ -0.09
SMARCE1-214ENST00000578112 CCDC30Q5VVM6 783 aa14.51□□□□□ -0.09
SMARCE1-214ENST00000578112 PODNQ7Z5L7 613 aa14.51□□□□□ -0.09
SMARCE1-214ENST00000578112 CCDC146Q8IYE0 955 aa14.51□□□□□ -0.09
SMARCE1-214ENST00000578112 MYO3BQ8WXR4 1341 aa14.51□□□□□ -0.09
SMARCE1-214ENST00000578112 METTL22Q9BUU2 404 aaPredicted RBP14.51□□□□□ -0.09
SMARCE1-214ENST00000578112 MYH3P11055 1940 aa14.51□□□□□ -0.09
SMARCE1-214ENST00000578112 MED23Q9ULK4 1368 aa14.51□□□□□ -0.09
SMARCE1-214ENST00000578112 FAM155AB1AL88 458 aaPredicted RBP14.51□□□□□ -0.09
SMARCE1-214ENST00000578112 MLLT1Q03111 559 aaPredicted RBP14.51□□□□□ -0.09
SMARCE1-214ENST00000578112 RSBN1LQ6PCB5 846 aaPredicted RBP14.51□□□□□ -0.09
SMARCE1-214ENST00000578112 SULF1Q8IWU6 871 aa14.51□□□□□ -0.09
SMARCE1-214ENST00000578112 CDC5LQ99459 802 aaKnown RBP14.51□□□□□ -0.09
SMARCE1-214ENST00000578112 DBNDD1Q9H9R9 158 aa14.51□□□□□ -0.09
SMARCE1-214ENST00000578112 ADAMTS8Q9UP79 889 aa14.51□□□□□ -0.09
SMARCE1-214ENST00000578112 SLC10A3P09131 477 aa14.5□□□□□ -0.09
SMARCE1-214ENST00000578112 KRT24Q2M2I5 525 aa14.5□□□□□ -0.09
SMARCE1-214ENST00000578112 AKAP11Q9UKA4 1901 aa14.5□□□□□ -0.09
SMARCE1-214ENST00000578112 ATP5J2-PTCD1G3V325 749 aa14.49□□□□□ -0.09
SMARCE1-214ENST00000578112 G3V3G9 751 aa14.49□□□□□ -0.09
SMARCE1-214ENST00000578112 DCAF8Q5TAQ9 597 aa14.49□□□□□ -0.09
SMARCE1-214ENST00000578112 MCOLN1Q9GZU1 580 aa14.49□□□□□ -0.09
SMARCE1-214ENST00000578112 COL1A1P02452 1464 aaPredicted RBP14.49□□□□□ -0.09
SMARCE1-214ENST00000578112 NEUROD2Q15784 382 aa14.49□□□□□ -0.09
SMARCE1-214ENST00000578112 ANKRD18AQ8IVF6 992 aa14.49□□□□□ -0.09
SMARCE1-214ENST00000578112 SCN9AQ15858 1988 aa14.49□□□□□ -0.09
SMARCE1-214ENST00000578112 UFL1O94874 794 aa14.48□□□□□ -0.09
SMARCE1-214ENST00000578112 SLC34A2O95436 690 aa14.48□□□□□ -0.09
SMARCE1-214ENST00000578112 CCDC27Q2M243 656 aa14.48□□□□□ -0.09
SMARCE1-214ENST00000578112 NOM1Q5C9Z4 860 aaKnown RBP14.48□□□□□ -0.09
SMARCE1-214ENST00000578112 SAMD7Q7Z3H4 446 aa14.48□□□□□ -0.09
SMARCE1-214ENST00000578112 ZNF408Q9H9D4 720 aa14.48□□□□□ -0.09
SMARCE1-214ENST00000578112 ZBTB12Q9Y330 459 aaPredicted RBP14.48□□□□□ -0.09
SMARCE1-214ENST00000578112 COL4A1P02462 1669 aa14.48□□□□□ -0.09
SMARCE1-214ENST00000578112 RIMBP2O15034 1052 aa14.48□□□□□ -0.09
SMARCE1-214ENST00000578112 TBC1D10BQ4KMP7 808 aaPredicted RBP14.48□□□□□ -0.09
SMARCE1-214ENST00000578112 GMLQ99445 158 aa14.48□□□□□ -0.09
SMARCE1-214ENST00000578112 ANKIB1Q9P2G1 1089 aa14.48□□□□□ -0.09
SMARCE1-214ENST00000578112 ZNF646O15015 1829 aaPredicted RBP14.48□□□□□ -0.09
SMARCE1-214ENST00000578112 GRM1Q13255 1194 aa14.47□□□□□ -0.09
SMARCE1-214ENST00000578112 MYD88Q99836 296 aa14.47□□□□□ -0.09
SMARCE1-214ENST00000578112 CACNA1FO60840 1977 aa14.47□□□□□ -0.09
SMARCE1-214ENST00000578112 KSR2Q6VAB6 950 aa14.47□□□□□ -0.09
SMARCE1-214ENST00000578112 PRKRIP1Q9H875 184 aaPredicted RBP14.47□□□□□ -0.09
SMARCE1-214ENST00000578112 BSDC1Q9NW68 430 aaPredicted RBP14.47□□□□□ -0.09
SMARCE1-214ENST00000578112 USP17L3A6NCW0 530 aa14.46□□□□□ -0.09
SMARCE1-214ENST00000578112 USP17L4A6NCW7 530 aa14.46□□□□□ -0.09
SMARCE1-214ENST00000578112 CCDC85CA6NKD9 419 aa14.46□□□□□ -0.09
SMARCE1-214ENST00000578112 USP17L1Q7RTZ2 530 aa14.46□□□□□ -0.09
SMARCE1-214ENST00000578112 CDCA5Q96FF9 252 aa14.46□□□□□ -0.09
SMARCE1-214ENST00000578112 PLA2G12BQ9BX93 195 aa14.46□□□□□ -0.09
SMARCE1-214ENST00000578112 IL16Q14005 1332 aa14.46□□□□□ -0.09
SMARCE1-214ENST00000578112 SHTN1A0MZ66 631 aa14.46□□□□□ -0.1
SMARCE1-214ENST00000578112 USP17L8P0C7I0 530 aa14.46□□□□□ -0.1
SMARCE1-214ENST00000578112 ZNF157P51786 506 aaPredicted RBP14.46□□□□□ -0.1
SMARCE1-214ENST00000578112 CTSWP56202 376 aa14.46□□□□□ -0.1
SMARCE1-214ENST00000578112 NEXNQ0ZGT2 675 aa14.46□□□□□ -0.1
SMARCE1-214ENST00000578112 DGKZQ13574 1117 aa14.46□□□□□ -0.1
SMARCE1-214ENST00000578112 PKN2Q16513 984 aaKnown RBP14.46□□□□□ -0.1
SMARCE1-214ENST00000578112 DOK7Q18PE1 504 aa14.46□□□□□ -0.1
SMARCE1-214ENST00000578112 GGA3Q9NZ52 723 aa14.46□□□□□ -0.1
SMARCE1-214ENST00000578112 LEMD3Q9Y2U8 911 aa14.46□□□□□ -0.1
SMARCE1-214ENST00000578112 KIF23Q02241 960 aaPredicted RBP14.45□□□□□ -0.1
SMARCE1-214ENST00000578112 DDX10Q13206 875 aaKnown RBP14.45□□□□□ -0.1
SMARCE1-214ENST00000578112 COA1Q9GZY4 146 aa14.45□□□□□ -0.1
SMARCE1-214ENST00000578112 LAMB1P07942 1786 aa14.45□□□□□ -0.1
SMARCE1-214ENST00000578112 FAM161AQ3B820 660 aa14.45□□□□□ -0.1
SMARCE1-214ENST00000578112 POLR2AP24928 1970 aaKnown RBP14.44□□□□□ -0.1
SMARCE1-214ENST00000578112 UNCXA6NJT0 531 aa14.44□□□□□ -0.1
SMARCE1-214ENST00000578112 ADM5C9JUS6 153 aa14.44□□□□□ -0.1
SMARCE1-214ENST00000578112 CFHR5Q9BXR6 569 aa14.44□□□□□ -0.1
SMARCE1-214ENST00000578112 ANKRD2Q9GZV1 360 aa14.44□□□□□ -0.1
SMARCE1-214ENST00000578112 MYOZ2Q9NPC6 264 aa14.44□□□□□ -0.1
SMARCE1-214ENST00000578112 SEC31BQ9NQW1 1179 aa14.44□□□□□ -0.1
SMARCE1-214ENST00000578112 RNF186Q9NXI6 227 aa14.44□□□□□ -0.1
SMARCE1-214ENST00000578112 SCARF1Q14162 830 aa14.44□□□□□ -0.1
SMARCE1-214ENST00000578112 STRIP1Q5VSL9 837 aa14.44□□□□□ -0.1
SMARCE1-214ENST00000578112 RASAL3Q86YV0 1011 aa14.44□□□□□ -0.1
SMARCE1-214ENST00000578112 STK31Q9BXU1 1019 aa14.44□□□□□ -0.1
SMARCE1-214ENST00000578112 PHAXQ9H814 394 aaKnown RBP14.44□□□□□ -0.1
SMARCE1-214ENST00000578112 APAF1O14727 1248 aa14.42□□□□□ -0.1
SMARCE1-214ENST00000578112 CTU1Q7Z7A3 348 aaKnown RBP14.42□□□□□ -0.1
SMARCE1-214ENST00000578112 NF2P35240 595 aa14.42□□□□□ -0.1
SMARCE1-214ENST00000578112 ANGEL2Q5VTE6 544 aaKnown RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms