RNA–Protein interactions for RNA: ENST00000578093.1

PTPRM-206, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 464 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-206ENST00000578093 SLC27A5Q9Y2P5 690 aa5.52□□□□□ -1.53
PTPRM-206ENST00000578093 SALL2Q9Y467 1007 aaPredicted RBP5.52□□□□□ -1.53
PTPRM-206ENST00000578093 PCDHB15Q9Y5E8 787 aa5.52□□□□□ -1.53
PTPRM-206ENST00000578093 TERTO14746 1132 aaKnown RBP5.51□□□□□ -1.53
PTPRM-206ENST00000578093 TOMM70O94826 608 aa5.51□□□□□ -1.53
PTPRM-206ENST00000578093 GYS1P13807 737 aa5.51□□□□□ -1.53
PTPRM-206ENST00000578093 DPEP1P16444 411 aa5.51□□□□□ -1.53
PTPRM-206ENST00000578093 KCNA3P22001 575 aa5.51□□□□□ -1.53
PTPRM-206ENST00000578093 RFC5P40937 340 aa5.51□□□□□ -1.53
PTPRM-206ENST00000578093 COPS2P61201 443 aa5.51□□□□□ -1.53
PTPRM-206ENST00000578093 FLIIQ13045 1269 aa5.51□□□□□ -1.53
PTPRM-206ENST00000578093 COL13A1Q5TAT6 717 aaPredicted RBP5.51□□□□□ -1.53
PTPRM-206ENST00000578093 TMOD3Q9NYL9 352 aa5.51□□□□□ -1.53
PTPRM-206ENST00000578093 DACH1Q9UI36 760 aa5.51□□□□□ -1.53
PTPRM-206ENST00000578093 UBR2Q8IWV8 1755 aa5.51□□□□□ -1.53
PTPRM-206ENST00000578093 DICER1Q9UPY3 1922 aaKnown RBP5.5□□□□□ -1.53
PTPRM-206ENST00000578093 SCN7AQ01118 1682 aa5.5□□□□□ -1.53
PTPRM-206ENST00000578093 PPM1GO15355 546 aaPredicted RBP5.5□□□□□ -1.53
PTPRM-206ENST00000578093 ZPR1O75312 459 aa5.5□□□□□ -1.53
PTPRM-206ENST00000578093 PRELPP51888 382 aa5.5□□□□□ -1.53
PTPRM-206ENST00000578093 DDR1Q08345 913 aa5.5□□□□□ -1.53
PTPRM-206ENST00000578093 QPCTQ16769 361 aa5.5□□□□□ -1.53
PTPRM-206ENST00000578093 RETREG3Q86VR2 466 aa5.5□□□□□ -1.53
PTPRM-206ENST00000578093 BANK1Q8NDB2 785 aa5.5□□□□□ -1.53
PTPRM-206ENST00000578093 HELBQ8NG08 1087 aaPredicted RBP5.5□□□□□ -1.53
PTPRM-206ENST00000578093 TSC1Q92574 1164 aa5.5□□□□□ -1.53
PTPRM-206ENST00000578093 MTRQ99707 1265 aa5.5□□□□□ -1.53
PTPRM-206ENST00000578093 USB1Q9BQ65 265 aaKnown RBP5.5□□□□□ -1.53
PTPRM-206ENST00000578093 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.5□□□□□ -1.53
PTPRM-206ENST00000578093 GMPR2Q9P2T1 348 aaKnown RBP5.5□□□□□ -1.53
PTPRM-206ENST00000578093 SRP68Q9UHB9 627 aaKnown RBP5.5□□□□□ -1.53
PTPRM-206ENST00000578093 PLEKHG2Q9H7P9 1386 aa5.5□□□□□ -1.53
PTPRM-206ENST00000578093 WASHC2AQ641Q2 1341 aa5.49□□□□□ -1.53
PTPRM-206ENST00000578093 CNTNAP4Q9C0A0 1308 aa5.49□□□□□ -1.53
PTPRM-206ENST00000578093 FER1L6Q2WGJ9 1857 aa5.49□□□□□ -1.53
PTPRM-206ENST00000578093 TGFB2P61812 414 aa5.49□□□□□ -1.53
PTPRM-206ENST00000578093 TMF1P82094 1093 aa5.49□□□□□ -1.53
PTPRM-206ENST00000578093 PRR20EP86478 221 aa5.49□□□□□ -1.53
PTPRM-206ENST00000578093 PRR20CP86479 221 aa5.49□□□□□ -1.53
PTPRM-206ENST00000578093 PRR20DP86480 221 aa5.49□□□□□ -1.53
PTPRM-206ENST00000578093 PRR20BP86481 221 aa5.49□□□□□ -1.53
PTPRM-206ENST00000578093 PRR20AP86496 221 aa5.49□□□□□ -1.53
PTPRM-206ENST00000578093 RASSF7Q02833 373 aa5.49□□□□□ -1.53
PTPRM-206ENST00000578093 EIF4A2Q14240 407 aaKnown RBP5.49□□□□□ -1.53
PTPRM-206ENST00000578093 RTL5Q5HYW3 569 aaPredicted RBP5.49□□□□□ -1.53
PTPRM-206ENST00000578093 C9orf131Q5VYM1 1079 aa5.49□□□□□ -1.53
PTPRM-206ENST00000578093 BRICD5Q6PL45 260 aa5.49□□□□□ -1.53
PTPRM-206ENST00000578093 ARHGAP27Q6ZUM4 889 aa5.49□□□□□ -1.53
PTPRM-206ENST00000578093 IFNL2Q8IZJ0 200 aa5.49□□□□□ -1.53
PTPRM-206ENST00000578093 KLRG1Q96E93 195 aa5.49□□□□□ -1.53
PTPRM-206ENST00000578093 SPSB2Q99619 263 aa5.49□□□□□ -1.53
PTPRM-206ENST00000578093 SPG7Q9UQ90 795 aa5.49□□□□□ -1.53
PTPRM-206ENST00000578093 RTCBQ9Y3I0 505 aaKnown RBP5.49□□□□□ -1.53
PTPRM-206ENST00000578093 CARMIL3Q8ND23 1372 aa5.49□□□□□ -1.53
PTPRM-206ENST00000578093 MRC1P22897 1456 aa5.49□□□□□ -1.53
PTPRM-206ENST00000578093 ARFGEF2Q9Y6D5 1785 aa5.49□□□□□ -1.53
PTPRM-206ENST00000578093 SIPA1L3O60292 1781 aaPredicted RBP5.48□□□□□ -1.53
PTPRM-206ENST00000578093 BCORQ6W2J9 1755 aa5.48□□□□□ -1.53
PTPRM-206ENST00000578093 APBB1O00213 710 aa5.48□□□□□ -1.53
PTPRM-206ENST00000578093 AP1G2O75843 785 aa5.48□□□□□ -1.53
PTPRM-206ENST00000578093 CHRNA5P30532 468 aa5.48□□□□□ -1.53
PTPRM-206ENST00000578093 RNF19BQ6ZMZ0 732 aa5.48□□□□□ -1.53
PTPRM-206ENST00000578093 AEBP1Q8IUX7 1158 aa5.48□□□□□ -1.53
PTPRM-206ENST00000578093 JMYQ8N9B5 988 aa5.48□□□□□ -1.53
PTPRM-206ENST00000578093 PRR7Q8TB68 274 aa5.48□□□□□ -1.53
PTPRM-206ENST00000578093 DCAF5Q96JK2 942 aa5.48□□□□□ -1.53
PTPRM-206ENST00000578093 CCDC87Q9NVE4 849 aa5.48□□□□□ -1.53
PTPRM-206ENST00000578093 RNF181Q9P0P0 153 aa5.48□□□□□ -1.53
PTPRM-206ENST00000578093 POLKQ9UBT6 870 aa5.48□□□□□ -1.53
PTPRM-206ENST00000578093 USP42Q9H9J4 1324 aaKnown RBP5.48□□□□□ -1.53
PTPRM-206ENST00000578093 RPS6KA4O75676 772 aa5.47□□□□□ -1.53
PTPRM-206ENST00000578093 ADH1BP00325 375 aa5.47□□□□□ -1.53
PTPRM-206ENST00000578093 TNNT2P45379 298 aaPredicted RBP5.47□□□□□ -1.53
PTPRM-206ENST00000578093 CRKLP46109 303 aaKnown RBP5.47□□□□□ -1.53
PTPRM-206ENST00000578093 TJAP1Q5JTD0 557 aa5.47□□□□□ -1.53
PTPRM-206ENST00000578093 TRAPPC3LQ5T215 181 aa5.47□□□□□ -1.53
PTPRM-206ENST00000578093 DESI1Q6ICB0 168 aa5.47□□□□□ -1.53
PTPRM-206ENST00000578093 NLGN1Q8N2Q7 840 aa5.47□□□□□ -1.53
PTPRM-206ENST00000578093 SYMPKQ92797 1274 aaKnown RBP5.47□□□□□ -1.53
PTPRM-206ENST00000578093 THAP11Q96EK4 314 aa5.47□□□□□ -1.53
PTPRM-206ENST00000578093 RRAGCQ9HB90 399 aa5.47□□□□□ -1.53
PTPRM-206ENST00000578093 PRM3Q9NNZ6 103 aa5.47□□□□□ -1.53
PTPRM-206ENST00000578093 PARP3Q9Y6F1 533 aa5.47□□□□□ -1.53
PTPRM-206ENST00000578093 FAM187AA6NFU0 413 aa5.46□□□□□ -1.54
PTPRM-206ENST00000578093 POLRMTO00411 1230 aaKnown RBP5.46□□□□□ -1.54
PTPRM-206ENST00000578093 PTCD1O75127 700 aaKnown RBP5.46□□□□□ -1.54
PTPRM-206ENST00000578093 RFC4P35249 363 aa5.46□□□□□ -1.54
PTPRM-206ENST00000578093 MSS51Q4VC12 460 aa5.46□□□□□ -1.54
PTPRM-206ENST00000578093 RC3H1Q5TC82 1133 aaKnown RBP5.46□□□□□ -1.54
PTPRM-206ENST00000578093 ZNF530Q6P9A1 599 aaPredicted RBP5.46□□□□□ -1.54
PTPRM-206ENST00000578093 SLX4Q8IY92 1834 aa5.46□□□□□ -1.54
PTPRM-206ENST00000578093 ERVV-2B6SEH9 535 aa5.45□□□□□ -1.54
PTPRM-206ENST00000578093 CFAP99D6REC4 459 aa5.45□□□□□ -1.54
PTPRM-206ENST00000578093 USP17L8P0C7I0 530 aa5.45□□□□□ -1.54
PTPRM-206ENST00000578093 HSPA1AP0DMV8 641 aaKnown RBP5.45□□□□□ -1.54
PTPRM-206ENST00000578093 HSPA1BP0DMV9 641 aaKnown RBP5.45□□□□□ -1.54
PTPRM-206ENST00000578093 FSTL1Q12841 308 aa5.45□□□□□ -1.54
PTPRM-206ENST00000578093 DALRD3Q5D0E6 543 aaKnown RBP5.45□□□□□ -1.54
PTPRM-206ENST00000578093 INTS5Q6P9B9 1019 aaKnown RBP5.45□□□□□ -1.54
PTPRM-206ENST00000578093 C16orf71Q8IYS4 520 aaPredicted RBP5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms