RNA–Protein interactions for RNA: ENST00000577897.1

SREBF1-217, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-217ENST00000577897 SP8Q8IXZ3 490 aa17.83■□□□□ 0.44
SREBF1-217ENST00000577897 RASAL3Q86YV0 1011 aa17.82■□□□□ 0.44
SREBF1-217ENST00000577897 ZNF296Q8WUU4 475 aaPredicted RBP17.82■□□□□ 0.44
SREBF1-217ENST00000577897 DPF2Q92785 391 aa17.82■□□□□ 0.44
SREBF1-217ENST00000577897 POLR2AP24928 1970 aaKnown RBP17.81■□□□□ 0.44
SREBF1-217ENST00000577897 BBOX1O75936 387 aa17.81■□□□□ 0.44
SREBF1-217ENST00000577897 TBC1D8O95759 1140 aa17.81■□□□□ 0.44
SREBF1-217ENST00000577897 TAF7Q15545 349 aaPredicted RBP17.81■□□□□ 0.44
SREBF1-217ENST00000577897 PARP10Q53GL7 1025 aa17.81■□□□□ 0.44
SREBF1-217ENST00000577897 GIGYF2Q6Y7W6 1299 aaKnown RBP17.81■□□□□ 0.44
SREBF1-217ENST00000577897 SULF1Q8IWU6 871 aa17.81■□□□□ 0.44
SREBF1-217ENST00000577897 UTP14AQ9BVJ6 771 aaKnown RBP17.81■□□□□ 0.44
SREBF1-217ENST00000577897 DBNDD1Q9H9R9 158 aa17.81■□□□□ 0.44
SREBF1-217ENST00000577897 GGA3Q9NZ52 723 aa17.81■□□□□ 0.44
SREBF1-217ENST00000577897 SZT2Q5T011 3432 aa17.8■□□□□ 0.44
SREBF1-217ENST00000577897 DUOX1Q9NRD9 1551 aa17.8■□□□□ 0.44
SREBF1-217ENST00000577897 ZNF428Q96B54 188 aa17.8■□□□□ 0.44
SREBF1-217ENST00000577897 CDCA5Q96FF9 252 aa17.8■□□□□ 0.44
SREBF1-217ENST00000577897 LAMB2P55268 1798 aa17.8■□□□□ 0.44
SREBF1-217ENST00000577897 RIMBP2O15034 1052 aa17.79■□□□□ 0.44
SREBF1-217ENST00000577897 GNAI1P63096 354 aa17.79■□□□□ 0.44
SREBF1-217ENST00000577897 AAMPQ13685 434 aa17.79■□□□□ 0.44
SREBF1-217ENST00000577897 KIF4BQ2VIQ3 1234 aa17.79■□□□□ 0.44
SREBF1-217ENST00000577897 DDX46Q7L014 1031 aaKnown RBP17.79■□□□□ 0.44
SREBF1-217ENST00000577897 REM2Q8IYK8 340 aaPredicted RBP17.79■□□□□ 0.44
SREBF1-217ENST00000577897 ASTN2O75129 1339 aaPredicted RBP17.78■□□□□ 0.44
SREBF1-217ENST00000577897 HCLS1P14317 486 aaPredicted RBP17.78■□□□□ 0.44
SREBF1-217ENST00000577897 SPINK5Q9NQ38 1064 aaPredicted RBP17.78■□□□□ 0.44
SREBF1-217ENST00000577897 TRIM35Q9UPQ4 493 aa17.78■□□□□ 0.44
SREBF1-217ENST00000577897 CUL9Q8IWT3 2517 aa17.78■□□□□ 0.44
SREBF1-217ENST00000577897 CENPFP49454 3210 aa17.78■□□□□ 0.44
SREBF1-217ENST00000577897 GRAPQ13588 217 aa17.77■□□□□ 0.44
SREBF1-217ENST00000577897 PDE3AQ14432 1141 aa17.77■□□□□ 0.44
SREBF1-217ENST00000577897 WASHC4Q2M389 1173 aa17.77■□□□□ 0.44
SREBF1-217ENST00000577897 SLC10A5Q5PT55 438 aa17.77■□□□□ 0.44
SREBF1-217ENST00000577897 FBXO46Q6PJ61 603 aaPredicted RBP17.77■□□□□ 0.44
SREBF1-217ENST00000577897 GRAPLQ8TC17 118 aaPredicted RBP17.77■□□□□ 0.44
SREBF1-217ENST00000577897 RPS12P25398 132 aaKnown RBP17.76■□□□□ 0.43
SREBF1-217ENST00000577897 B4GALNT3Q6L9W6 998 aa17.76■□□□□ 0.43
SREBF1-217ENST00000577897 ANKRD36CQ5JPF3 1778 aa17.76■□□□□ 0.43
SREBF1-217ENST00000577897 KDM3BQ7LBC6 1761 aa17.76■□□□□ 0.43
SREBF1-217ENST00000577897 HTTP42858 3142 aa17.76■□□□□ 0.43
SREBF1-217ENST00000577897 TAF1P21675 1872 aa17.75■□□□□ 0.43
SREBF1-217ENST00000577897 HTATSF1O43719 755 aaKnown RBP17.75■□□□□ 0.43
SREBF1-217ENST00000577897 ECE2O60344 883 aa17.75■□□□□ 0.43
SREBF1-217ENST00000577897 DOK7Q18PE1 504 aa17.75■□□□□ 0.43
SREBF1-217ENST00000577897 THUMPD2Q9BTF0 503 aaKnown RBP17.75■□□□□ 0.43
SREBF1-217ENST00000577897 KCNQ5Q9NR82 932 aa17.75■□□□□ 0.43
SREBF1-217ENST00000577897 IFT57Q9NWB7 429 aa17.75■□□□□ 0.43
SREBF1-217ENST00000577897 NSFL1CQ9UNZ2 370 aaKnown RBP17.75■□□□□ 0.43
SREBF1-217ENST00000577897 TRIOBPQ9H2D6 2365 aa17.75■□□□□ 0.43
SREBF1-217ENST00000577897 CEP290O15078 2479 aa17.75■□□□□ 0.43
SREBF1-217ENST00000577897 FANCIQ9NVI1 1328 aa17.74■□□□□ 0.43
SREBF1-217ENST00000577897 C6orf229H3BNL8 230 aa17.74■□□□□ 0.43
SREBF1-217ENST00000577897 GPR25O00155 361 aa17.74■□□□□ 0.43
SREBF1-217ENST00000577897 DLL1O00548 723 aa17.74■□□□□ 0.43
SREBF1-217ENST00000577897 EIF4A1P60842 406 aaKnown RBP17.74■□□□□ 0.43
SREBF1-217ENST00000577897 ANGEL2Q5VTE6 544 aaKnown RBP17.74■□□□□ 0.43
SREBF1-217ENST00000577897 LRRC37AA6NMS7 1700 aa17.74■□□□□ 0.43
SREBF1-217ENST00000577897 RTL9Q8NET4 1388 aa17.74■□□□□ 0.43
SREBF1-217ENST00000577897 KIAA0100Q14667 2235 aaKnown RBP17.74■□□□□ 0.43
SREBF1-217ENST00000577897 PAPPA2Q9BXP8 1791 aa17.74■□□□□ 0.43
SREBF1-217ENST00000577897 MKRN3Q13064 507 aaKnown RBP17.73■□□□□ 0.43
SREBF1-217ENST00000577897 MOB2Q70IA6 237 aa17.73■□□□□ 0.43
SREBF1-217ENST00000577897 EXOC6Q8TAG9 804 aa17.73■□□□□ 0.43
SREBF1-217ENST00000577897 DDX60Q8IY21 1712 aaKnown RBP17.72■□□□□ 0.43
SREBF1-217ENST00000577897 RARSP54136 660 aaKnown RBP17.72■□□□□ 0.43
SREBF1-217ENST00000577897 IPO8O15397 1037 aaKnown RBP17.71■□□□□ 0.43
SREBF1-217ENST00000577897 PLIN1O60240 522 aa17.71■□□□□ 0.43
SREBF1-217ENST00000577897 FKBP1BP68106 108 aa17.71■□□□□ 0.43
SREBF1-217ENST00000577897 TMC4Q7Z404 712 aa17.71■□□□□ 0.43
SREBF1-217ENST00000577897 CRBNQ96SW2 442 aa17.71■□□□□ 0.43
SREBF1-217ENST00000577897 TRMT112Q9UI30 125 aaKnown RBP17.71■□□□□ 0.43
SREBF1-217ENST00000577897 SCAF8Q9UPN6 1271 aaKnown RBP17.71■□□□□ 0.43
SREBF1-217ENST00000577897 BRCA2P51587 3418 aa17.71■□□□□ 0.43
SREBF1-217ENST00000577897 POTEFA5A3E0 1075 aa17.7■□□□□ 0.42
SREBF1-217ENST00000577897 UBE2Q2LH0YL09 131 aa17.7■□□□□ 0.42
SREBF1-217ENST00000577897 FKTNO75072 461 aa17.7■□□□□ 0.42
SREBF1-217ENST00000577897 ANXA1P04083 346 aa17.7■□□□□ 0.42
SREBF1-217ENST00000577897 SCARF1Q14162 830 aa17.7■□□□□ 0.42
SREBF1-217ENST00000577897 TTLL12Q14166 644 aaPredicted RBP17.7■□□□□ 0.42
SREBF1-217ENST00000577897 ALDH1L2Q3SY69 923 aa17.7■□□□□ 0.42
SREBF1-217ENST00000577897 EYA3Q99504 573 aa17.7■□□□□ 0.42
SREBF1-217ENST00000577897 POLLQ9UGP5 575 aa17.7■□□□□ 0.42
SREBF1-217ENST00000577897 ERBB4Q15303 1308 aa17.7■□□□□ 0.42
SREBF1-217ENST00000577897 SH3TC1Q8TE82 1336 aa17.7■□□□□ 0.42
SREBF1-217ENST00000577897 COL6A3P12111 3177 aa17.69■□□□□ 0.42
SREBF1-217ENST00000577897 EIF2S2P20042 333 aaKnown RBP17.69■□□□□ 0.42
SREBF1-217ENST00000577897 GPSM2P81274 684 aa17.69■□□□□ 0.42
SREBF1-217ENST00000577897 EXOSC9Q06265 439 aaKnown RBP17.69■□□□□ 0.42
SREBF1-217ENST00000577897 NLRP10Q86W26 655 aa17.69■□□□□ 0.42
SREBF1-217ENST00000577897 LAS1LQ9Y4W2 734 aaKnown RBP17.69■□□□□ 0.42
SREBF1-217ENST00000577897 KIF16BQ96L93 1317 aa17.69■□□□□ 0.42
SREBF1-217ENST00000577897 G3V3G9 751 aa17.68■□□□□ 0.42
SREBF1-217ENST00000577897 BCAR3O75815 825 aa17.68■□□□□ 0.42
SREBF1-217ENST00000577897 DCAF8Q5TAQ9 597 aa17.68■□□□□ 0.42
SREBF1-217ENST00000577897 ZKSCAN2Q63HK3 967 aa17.68■□□□□ 0.42
SREBF1-217ENST00000577897 CELF1Q92879 486 aaKnown RBP17.68■□□□□ 0.42
SREBF1-217ENST00000577897 CHMP4BQ9H444 224 aaKnown RBP17.68■□□□□ 0.42
SREBF1-217ENST00000577897 DLG5Q8TDM6 1919 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms