RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 GPTP24298 496 aa13.97□□□□□ -0.17
CDK5RAP3-204ENST00000577664 EXOC6Q8TAG9 804 aa13.97□□□□□ -0.17
CDK5RAP3-204ENST00000577664 KAZALD1Q96I82 304 aa13.97□□□□□ -0.17
CDK5RAP3-204ENST00000577664 RIC1Q4ADV7 1423 aa13.97□□□□□ -0.17
CDK5RAP3-204ENST00000577664 SH3TC1Q8TE82 1336 aa13.96□□□□□ -0.17
CDK5RAP3-204ENST00000577664 GNAI2P04899 355 aa13.96□□□□□ -0.17
CDK5RAP3-204ENST00000577664 NEFLP07196 543 aa13.96□□□□□ -0.17
CDK5RAP3-204ENST00000577664 CSF1RP07333 972 aa13.96□□□□□ -0.17
CDK5RAP3-204ENST00000577664 MTX1Q13505 466 aa13.96□□□□□ -0.17
CDK5RAP3-204ENST00000577664 RABL6Q3YEC7 729 aaPredicted RBP13.96□□□□□ -0.17
CDK5RAP3-204ENST00000577664 TRMT112Q9UI30 125 aaKnown RBP13.96□□□□□ -0.17
CDK5RAP3-204ENST00000577664 ANKRD31Q8N7Z5 1873 aa13.95□□□□□ -0.18
CDK5RAP3-204ENST00000577664 KLRG2A4D1S0 409 aaPredicted RBP13.95□□□□□ -0.18
CDK5RAP3-204ENST00000577664 DLL1O00548 723 aa13.95□□□□□ -0.18
CDK5RAP3-204ENST00000577664 UBTFL1P0CB47 393 aaPredicted RBP13.95□□□□□ -0.18
CDK5RAP3-204ENST00000577664 GRM1Q13255 1194 aa13.95□□□□□ -0.18
CDK5RAP3-204ENST00000577664 SOGA3Q5TF21 947 aa13.95□□□□□ -0.18
CDK5RAP3-204ENST00000577664 SAPCD2Q86UD0 394 aa13.95□□□□□ -0.18
CDK5RAP3-204ENST00000577664 RPAP2Q8IXW5 612 aaPredicted RBP13.95□□□□□ -0.18
CDK5RAP3-204ENST00000577664 FAM89AQ96GI7 184 aa13.95□□□□□ -0.18
CDK5RAP3-204ENST00000577664 ZNF541Q9H0D2 1346 aa13.94□□□□□ -0.18
CDK5RAP3-204ENST00000577664 PDE8AO60658 829 aa13.94□□□□□ -0.18
CDK5RAP3-204ENST00000577664 COL11A2P13942 1736 aaPredicted RBP13.94□□□□□ -0.18
CDK5RAP3-204ENST00000577664 FOXO4P98177 505 aa13.94□□□□□ -0.18
CDK5RAP3-204ENST00000577664 FMR1Q06787 632 aaKnown RBP eCLIP13.94□□□□□ -0.18
CDK5RAP3-204ENST00000577664 UBE3BQ7Z3V4 1068 aa13.94□□□□□ -0.18
CDK5RAP3-204ENST00000577664 IRS4O14654 1257 aaPredicted RBP13.93□□□□□ -0.18
CDK5RAP3-204ENST00000577664 ATP8B2P98198 1209 aa13.93□□□□□ -0.18
CDK5RAP3-204ENST00000577664 SF3B3Q15393 1217 aaKnown RBP13.93□□□□□ -0.18
CDK5RAP3-204ENST00000577664 PRR5LQ6MZQ0 368 aa13.93□□□□□ -0.18
CDK5RAP3-204ENST00000577664 NBPF5PQ86XG9 351 aaPredicted RBP13.93□□□□□ -0.18
CDK5RAP3-204ENST00000577664 SUCLG2Q96I99 432 aa13.93□□□□□ -0.18
CDK5RAP3-204ENST00000577664 SLX4Q8IY92 1834 aa13.92□□□□□ -0.18
CDK5RAP3-204ENST00000577664 PDE6BP35913 854 aa13.92□□□□□ -0.18
CDK5RAP3-204ENST00000577664 IRX6P78412 446 aaPredicted RBP13.92□□□□□ -0.18
CDK5RAP3-204ENST00000577664 CIAPIN1Q6FI81 312 aa13.92□□□□□ -0.18
CDK5RAP3-204ENST00000577664 BICDL1Q6ZP65 573 aa13.92□□□□□ -0.18
CDK5RAP3-204ENST00000577664 SYNE4Q8N205 404 aa13.92□□□□□ -0.18
CDK5RAP3-204ENST00000577664 ANKRD44Q8N8A2 993 aa13.92□□□□□ -0.18
CDK5RAP3-204ENST00000577664 ZNF622Q969S3 477 aaKnown RBP eCLIP13.92□□□□□ -0.186e-13■■□□□ 12.3
CDK5RAP3-204ENST00000577664 BRIP1Q9BX63 1249 aa13.92□□□□□ -0.18
CDK5RAP3-204ENST00000577664 PCDHB15Q9Y5E8 787 aa13.92□□□□□ -0.18
CDK5RAP3-204ENST00000577664 FZD9O00144 591 aa13.91□□□□□ -0.18
CDK5RAP3-204ENST00000577664 HDAC1Q13547 482 aaPredicted RBP13.91□□□□□ -0.18
CDK5RAP3-204ENST00000577664 EPHA10Q5JZY3 1008 aa13.91□□□□□ -0.18
CDK5RAP3-204ENST00000577664 CEP85Q6P2H3 762 aa13.91□□□□□ -0.18
CDK5RAP3-204ENST00000577664 SIRT2Q8IXJ6 389 aa13.91□□□□□ -0.18
CDK5RAP3-204ENST00000577664 GPC2Q8N158 579 aa13.91□□□□□ -0.18
CDK5RAP3-204ENST00000577664 TTLL11Q8NHH1 800 aa13.91□□□□□ -0.18
CDK5RAP3-204ENST00000577664 SSH3Q8TE77 659 aa13.91□□□□□ -0.18
CDK5RAP3-204ENST00000577664 SAGE1Q9NXZ1 904 aa13.91□□□□□ -0.18
CDK5RAP3-204ENST00000577664 LRRFIP2Q9Y608 721 aaKnown RBP13.91□□□□□ -0.18
CDK5RAP3-204ENST00000577664 RTL9Q8NET4 1388 aa13.91□□□□□ -0.18
CDK5RAP3-204ENST00000577664 POLA2Q14181 598 aa13.9□□□□□ -0.18
CDK5RAP3-204ENST00000577664 CRY2Q49AN0 593 aa13.9□□□□□ -0.18
CDK5RAP3-204ENST00000577664 CNBD1Q8NA66 436 aa13.9□□□□□ -0.18
CDK5RAP3-204ENST00000577664 CNKSR1Q969H4 720 aa13.9□□□□□ -0.18
CDK5RAP3-204ENST00000577664 BICC1Q9H694 974 aaKnown RBP13.9□□□□□ -0.18
CDK5RAP3-204ENST00000577664 MKI67P46013 3256 aaKnown RBP13.89□□□□□ -0.19
CDK5RAP3-204ENST00000577664 SZT2Q5T011 3432 aa13.89□□□□□ -0.19
CDK5RAP3-204ENST00000577664 CUL9Q8IWT3 2517 aa13.89□□□□□ -0.19
CDK5RAP3-204ENST00000577664 NOGQ13253 232 aa13.89□□□□□ -0.19
CDK5RAP3-204ENST00000577664 NUTM1Q86Y26 1132 aa13.89□□□□□ -0.19
CDK5RAP3-204ENST00000577664 C7orf43Q8WVR3 580 aa13.89□□□□□ -0.19
CDK5RAP3-204ENST00000577664 NLRP3Q96P20 1036 aa13.89□□□□□ -0.19
CDK5RAP3-204ENST00000577664 DDX60Q8IY21 1712 aaKnown RBP13.88□□□□□ -0.19
CDK5RAP3-204ENST00000577664 GTF2E1P29083 439 aaPredicted RBP13.88□□□□□ -0.19
CDK5RAP3-204ENST00000577664 HOXA10P31260 410 aaPredicted RBP13.88□□□□□ -0.19
CDK5RAP3-204ENST00000577664 CTSWP56202 376 aa13.88□□□□□ -0.19
CDK5RAP3-204ENST00000577664 ST5P78524 1137 aa13.88□□□□□ -0.19
CDK5RAP3-204ENST00000577664 STYK1Q6J9G0 422 aa13.88□□□□□ -0.19
CDK5RAP3-204ENST00000577664 PRPF40BQ6NWY9 871 aaKnown RBP13.88□□□□□ -0.19
CDK5RAP3-204ENST00000577664 LMBR1LQ6UX01 489 aa13.88□□□□□ -0.19
CDK5RAP3-204ENST00000577664 CTU1Q7Z7A3 348 aaKnown RBP13.88□□□□□ -0.19
CDK5RAP3-204ENST00000577664 JARID2Q92833 1246 aaPredicted RBP13.88□□□□□ -0.19
CDK5RAP3-204ENST00000577664 LAMB2P55268 1798 aa13.88□□□□□ -0.19
CDK5RAP3-204ENST00000577664 ABCC12Q96J65 1359 aa13.87□□□□□ -0.19
CDK5RAP3-204ENST00000577664 TRAF5O00463 557 aa13.87□□□□□ -0.19
CDK5RAP3-204ENST00000577664 HCLS1P14317 486 aaPredicted RBP13.87□□□□□ -0.19
CDK5RAP3-204ENST00000577664 RFX5P48382 616 aaPredicted RBP13.87□□□□□ -0.19
CDK5RAP3-204ENST00000577664 RTL5Q5HYW3 569 aaPredicted RBP13.87□□□□□ -0.19
CDK5RAP3-204ENST00000577664 PPP4R2Q9NY27 417 aa13.87□□□□□ -0.19
CDK5RAP3-204ENST00000577664 FBXO3Q9UK99 471 aa13.87□□□□□ -0.19
CDK5RAP3-204ENST00000577664 HPS5Q9UPZ3 1129 aa13.87□□□□□ -0.19
CDK5RAP3-204ENST00000577664 NOP58Q9Y2X3 529 aaKnown RBP13.87□□□□□ -0.19
CDK5RAP3-204ENST00000577664 A0A0C4DFX4 3053 aa13.86□□□□□ -0.19
CDK5RAP3-204ENST00000577664 PNMA6EA0A0J9YXQ4 647 aa13.86□□□□□ -0.19
CDK5RAP3-204ENST00000577664 FAM177BA6PVY3 158 aa13.86□□□□□ -0.19
CDK5RAP3-204ENST00000577664 FKBP4Q02790 459 aaKnown RBP eCLIP13.86□□□□□ -0.19
CDK5RAP3-204ENST00000577664 CCDC152Q4G0S7 254 aa13.86□□□□□ -0.19
CDK5RAP3-204ENST00000577664 USP50Q70EL3 339 aaPredicted RBP13.86□□□□□ -0.19
CDK5RAP3-204ENST00000577664 ZIC5Q96T25 663 aa13.86□□□□□ -0.19
CDK5RAP3-204ENST00000577664 RWDD1Q9H446 243 aaPredicted RBP13.86□□□□□ -0.19
CDK5RAP3-204ENST00000577664 C1orf115Q9H7X2 142 aa13.86□□□□□ -0.19
CDK5RAP3-204ENST00000577664 COPRSQ9NQ92 184 aa13.86□□□□□ -0.19
CDK5RAP3-204ENST00000577664 MYH3P11055 1940 aa13.86□□□□□ -0.19
CDK5RAP3-204ENST00000577664 CACNA1SQ13698 1873 aa13.85□□□□□ -0.19
CDK5RAP3-204ENST00000577664 SRGAP3O43295 1099 aa13.85□□□□□ -0.19
CDK5RAP3-204ENST00000577664 HMMRO75330 724 aa13.85□□□□□ -0.19
CDK5RAP3-204ENST00000577664 SRGNP10124 158 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms