RNA–Protein interactions for RNA: ENST00000575639.1

TRAPPC1-207, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-207ENST00000575639 GGA1Q9UJY5 639 aa18.78■□□□□ 0.6
TRAPPC1-207ENST00000575639 MINPP1Q9UNW1 487 aa18.78■□□□□ 0.6
TRAPPC1-207ENST00000575639 XDHP47989 1333 aa18.77■□□□□ 0.6
TRAPPC1-207ENST00000575639 GLTPD2A6NH11 291 aa18.77■□□□□ 0.6
TRAPPC1-207ENST00000575639 KIAA2012Q0VF49 1180 aa18.77■□□□□ 0.6
TRAPPC1-207ENST00000575639 AOC3Q16853 763 aa18.77■□□□□ 0.6
TRAPPC1-207ENST00000575639 ANKRD2Q9GZV1 360 aa18.77■□□□□ 0.6
TRAPPC1-207ENST00000575639 UFL1O94874 794 aa18.76■□□□□ 0.59
TRAPPC1-207ENST00000575639 ATP2B4P23634 1241 aa18.76■□□□□ 0.59
TRAPPC1-207ENST00000575639 EIF6P56537 245 aaKnown RBP18.76■□□□□ 0.59
TRAPPC1-207ENST00000575639 TBC1D16Q8TBP0 767 aa18.76■□□□□ 0.59
TRAPPC1-207ENST00000575639 POLLQ9UGP5 575 aa18.76■□□□□ 0.59
TRAPPC1-207ENST00000575639 FZD9O00144 591 aa18.75■□□□□ 0.59
TRAPPC1-207ENST00000575639 SLC34A2O95436 690 aa18.75■□□□□ 0.59
TRAPPC1-207ENST00000575639 LDHAL6AQ6ZMR3 332 aa18.75■□□□□ 0.59
TRAPPC1-207ENST00000575639 TNS4Q8IZW8 715 aa18.75■□□□□ 0.59
TRAPPC1-207ENST00000575639 TMEM57Q8N5G2 664 aa18.75■□□□□ 0.59
TRAPPC1-207ENST00000575639 ANKRD44Q8N8A2 993 aa18.75■□□□□ 0.59
TRAPPC1-207ENST00000575639 MEIS3Q99687 375 aa18.75■□□□□ 0.59
TRAPPC1-207ENST00000575639 ZC3H12CQ9C0D7 883 aaKnown RBP18.75■□□□□ 0.59
TRAPPC1-207ENST00000575639 TNNQ9UQP3 1299 aa18.75■□□□□ 0.59
TRAPPC1-207ENST00000575639 LAMB2P55268 1798 aa18.74■□□□□ 0.59
TRAPPC1-207ENST00000575639 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.74■□□□□ 0.59
TRAPPC1-207ENST00000575639 CNNM1Q9NRU3 951 aa18.74■□□□□ 0.59
TRAPPC1-207ENST00000575639 ZNRF3Q9ULT6 936 aa18.74■□□□□ 0.59
TRAPPC1-207ENST00000575639 G3V3G9 751 aa18.73■□□□□ 0.59
TRAPPC1-207ENST00000575639 DCAF8Q5TAQ9 597 aa18.73■□□□□ 0.59
TRAPPC1-207ENST00000575639 ITPRIPQ8IWB1 547 aa18.73■□□□□ 0.59
TRAPPC1-207ENST00000575639 ZNF594Q96JF6 807 aaPredicted RBP18.73■□□□□ 0.59
TRAPPC1-207ENST00000575639 LEMD3Q9Y2U8 911 aa18.73■□□□□ 0.59
TRAPPC1-207ENST00000575639 LRRFIP2Q9Y608 721 aaKnown RBP18.73■□□□□ 0.59
TRAPPC1-207ENST00000575639 FER1L6Q2WGJ9 1857 aa18.73■□□□□ 0.59
TRAPPC1-207ENST00000575639 RIMBP2O15034 1052 aa18.72■□□□□ 0.59
TRAPPC1-207ENST00000575639 GNAI2P04899 355 aa18.72■□□□□ 0.59
TRAPPC1-207ENST00000575639 KCNJ4P48050 445 aa18.72■□□□□ 0.59
TRAPPC1-207ENST00000575639 CHRNDQ07001 517 aa18.72■□□□□ 0.59
TRAPPC1-207ENST00000575639 JMYQ8N9B5 988 aa18.72■□□□□ 0.59
TRAPPC1-207ENST00000575639 RRAGCQ9HB90 399 aa18.71■□□□□ 0.59
TRAPPC1-207ENST00000575639 DDNO94850 711 aaPredicted RBP18.7■□□□□ 0.58
TRAPPC1-207ENST00000575639 RLBP1P12271 317 aa18.7■□□□□ 0.58
TRAPPC1-207ENST00000575639 VEGFAP15692 232 aaPredicted RBP18.7■□□□□ 0.58
TRAPPC1-207ENST00000575639 C16orf71Q8IYS4 520 aaPredicted RBP18.7■□□□□ 0.58
TRAPPC1-207ENST00000575639 GPC2Q8N158 579 aa18.7■□□□□ 0.58
TRAPPC1-207ENST00000575639 NMRK2Q9NPI5 230 aa18.7■□□□□ 0.58
TRAPPC1-207ENST00000575639 ZNF804BA4D1E1 1349 aa18.7■□□□□ 0.58
TRAPPC1-207ENST00000575639 ZNF541Q9H0D2 1346 aa18.7■□□□□ 0.58
TRAPPC1-207ENST00000575639 CACNA1SQ13698 1873 aa18.69■□□□□ 0.58
TRAPPC1-207ENST00000575639 TOMM70O94826 608 aa18.69■□□□□ 0.58
TRAPPC1-207ENST00000575639 TNIP1Q15025 636 aa18.69■□□□□ 0.58
TRAPPC1-207ENST00000575639 PANK1Q8TE04 598 aa18.69■□□□□ 0.58
TRAPPC1-207ENST00000575639 GPR101Q96P66 508 aaPredicted RBP18.69■□□□□ 0.58
TRAPPC1-207ENST00000575639 GJA3Q9Y6H8 435 aa18.69■□□□□ 0.58
TRAPPC1-207ENST00000575639 IQCA1LA6NCM1 817 aa18.68■□□□□ 0.58
TRAPPC1-207ENST00000575639 PLIN1O60240 522 aa18.68■□□□□ 0.58
TRAPPC1-207ENST00000575639 DOK7Q18PE1 504 aa18.68■□□□□ 0.58
TRAPPC1-207ENST00000575639 HELBQ8NG08 1087 aaPredicted RBP18.68■□□□□ 0.58
TRAPPC1-207ENST00000575639 KLRG1Q96E93 195 aa18.68■□□□□ 0.58
TRAPPC1-207ENST00000575639 MROH5Q6ZUA9 1318 aa18.68■□□□□ 0.58
TRAPPC1-207ENST00000575639 COL4A1P02462 1669 aa18.67■□□□□ 0.58
TRAPPC1-207ENST00000575639 TAF5LO75529 589 aa18.67■□□□□ 0.58
TRAPPC1-207ENST00000575639 CXCL9Q07325 125 aa18.67■□□□□ 0.58
TRAPPC1-207ENST00000575639 CIAPIN1Q6FI81 312 aa18.67■□□□□ 0.58
TRAPPC1-207ENST00000575639 L3MBTL3Q96JM7 780 aaPredicted RBP18.67■□□□□ 0.58
TRAPPC1-207ENST00000575639 PUS3Q9BZE2 481 aaKnown RBP18.67■□□□□ 0.58
TRAPPC1-207ENST00000575639 CHMP4BQ9H444 224 aaKnown RBP18.67■□□□□ 0.58
TRAPPC1-207ENST00000575639 DBNDD1Q9H9R9 158 aa18.67■□□□□ 0.58
TRAPPC1-207ENST00000575639 RIPOR2Q9Y4F9 1068 aa18.67■□□□□ 0.58
TRAPPC1-207ENST00000575639 ZBTB7BO15156 539 aaPredicted RBP18.66■□□□□ 0.58
TRAPPC1-207ENST00000575639 SRGAP3O43295 1099 aa18.66■□□□□ 0.58
TRAPPC1-207ENST00000575639 ECE2O60344 883 aa18.66■□□□□ 0.58
TRAPPC1-207ENST00000575639 RAD17O75943 681 aa18.66■□□□□ 0.58
TRAPPC1-207ENST00000575639 PDE3AQ14432 1141 aa18.66■□□□□ 0.58
TRAPPC1-207ENST00000575639 METTL24Q5JXM2 366 aa18.66■□□□□ 0.58
TRAPPC1-207ENST00000575639 FBXO3Q9UK99 471 aa18.66■□□□□ 0.58
TRAPPC1-207ENST00000575639 SBF1O95248 1867 aa18.66■□□□□ 0.58
TRAPPC1-207ENST00000575639 MED23Q9ULK4 1368 aa18.66■□□□□ 0.58
TRAPPC1-207ENST00000575639 EYA2O00167 538 aa18.65■□□□□ 0.58
TRAPPC1-207ENST00000575639 LMOD1P29536 600 aaPredicted RBP18.65■□□□□ 0.58
TRAPPC1-207ENST00000575639 RFX5P48382 616 aaPredicted RBP18.65■□□□□ 0.58
TRAPPC1-207ENST00000575639 PTPN12Q05209 780 aaKnown RBP18.65■□□□□ 0.58
TRAPPC1-207ENST00000575639 MTX1Q13505 466 aa18.65■□□□□ 0.58
TRAPPC1-207ENST00000575639 LRRC24Q50LG9 513 aa18.65■□□□□ 0.58
TRAPPC1-207ENST00000575639 PODNQ7Z5L7 613 aa18.65■□□□□ 0.58
TRAPPC1-207ENST00000575639 KLHDC4Q8TBB5 520 aa18.65■□□□□ 0.58
TRAPPC1-207ENST00000575639 LRRC37AA6NMS7 1700 aa18.64■□□□□ 0.57
TRAPPC1-207ENST00000575639 WTIPA6NIX2 430 aaPredicted RBP18.64■□□□□ 0.57
TRAPPC1-207ENST00000575639 YDJCA8MPS7 323 aa18.64■□□□□ 0.57
TRAPPC1-207ENST00000575639 HTRA3P83110 453 aa18.64■□□□□ 0.57
TRAPPC1-207ENST00000575639 UBE4AQ14139 1066 aa18.64■□□□□ 0.57
TRAPPC1-207ENST00000575639 MVPQ14764 893 aaKnown RBP18.64■□□□□ 0.57
TRAPPC1-207ENST00000575639 COA1Q9GZY4 146 aa18.64■□□□□ 0.57
TRAPPC1-207ENST00000575639 HACL1Q9UJ83 578 aa18.64■□□□□ 0.57
TRAPPC1-207ENST00000575639 DDX19BQ9UMR2 479 aa18.64■□□□□ 0.57
TRAPPC1-207ENST00000575639 TAF1P21675 1872 aa18.64■□□□□ 0.57
TRAPPC1-207ENST00000575639 DUOX1Q9NRD9 1551 aa18.64■□□□□ 0.57
TRAPPC1-207ENST00000575639 CIAO1O76071 339 aa18.63■□□□□ 0.57
TRAPPC1-207ENST00000575639 C15orf52Q6ZUT6 534 aaKnown RBP18.63■□□□□ 0.57
TRAPPC1-207ENST00000575639 COPRSQ9NQ92 184 aa18.63■□□□□ 0.57
TRAPPC1-207ENST00000575639 COG6Q9Y2V7 657 aa18.63■□□□□ 0.57
TRAPPC1-207ENST00000575639 MYH3P11055 1940 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms