RNA–Protein interactions for RNA: ENST00000575156.5

ERCC4-207, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC4, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-207ENST00000575156 MPHOSPH8Q99549 860 aa16.9■□□□□ 0.3
ERCC4-207ENST00000575156 TAF1P21675 1872 aa16.9■□□□□ 0.3
ERCC4-207ENST00000575156 SNAP23O00161 211 aa16.9■□□□□ 0.3
ERCC4-207ENST00000575156 RILPL2Q969X0 211 aa16.9■□□□□ 0.3
ERCC4-207ENST00000575156 CASZ1Q86V15 1759 aa16.9■□□□□ 0.3
ERCC4-207ENST00000575156 GLRX3O76003 335 aaKnown RBP16.89■□□□□ 0.29
ERCC4-207ENST00000575156 MMP10P09238 476 aa16.89■□□□□ 0.29
ERCC4-207ENST00000575156 ADORA1P30542 326 aa16.89■□□□□ 0.29
ERCC4-207ENST00000575156 IGHMBP2P38935 993 aaKnown RBP16.89■□□□□ 0.29
ERCC4-207ENST00000575156 GPATCH3Q96I76 525 aa16.89■□□□□ 0.29
ERCC4-207ENST00000575156 BOLA2Q9H3K6 86 aa16.89■□□□□ 0.29
ERCC4-207ENST00000575156 CDC45O75419 566 aa16.89■□□□□ 0.29
ERCC4-207ENST00000575156 TAF5LO75529 589 aa16.89■□□□□ 0.29
ERCC4-207ENST00000575156 SLC51AQ86UW1 340 aa16.89■□□□□ 0.29
ERCC4-207ENST00000575156 CDC5LQ99459 802 aaKnown RBP16.89■□□□□ 0.29
ERCC4-207ENST00000575156 ST5P78524 1137 aa16.88■□□□□ 0.29
ERCC4-207ENST00000575156 ANKRD18AQ8IVF6 992 aa16.88■□□□□ 0.29
ERCC4-207ENST00000575156 NDUFB9Q9Y6M9 179 aa16.88■□□□□ 0.29
ERCC4-207ENST00000575156 ERC2O15083 957 aa16.87■□□□□ 0.29
ERCC4-207ENST00000575156 PDE8BO95263 885 aa16.87■□□□□ 0.29
ERCC4-207ENST00000575156 ATP2B3Q16720 1220 aa16.87■□□□□ 0.29
ERCC4-207ENST00000575156 SPEF2Q9C093 1822 aa16.87■□□□□ 0.29
ERCC4-207ENST00000575156 XAGE2Q96GT9 111 aa16.87■□□□□ 0.29
ERCC4-207ENST00000575156 AKAP2Q9Y2D5 859 aa16.87■□□□□ 0.29
ERCC4-207ENST00000575156 MROH5Q6ZUA9 1318 aa16.86■□□□□ 0.29
ERCC4-207ENST00000575156 MFAP1P55081 439 aaKnown RBP16.86■□□□□ 0.29
ERCC4-207ENST00000575156 CHRNDQ07001 517 aa16.86■□□□□ 0.29
ERCC4-207ENST00000575156 CCDC125Q86Z20 511 aa16.86■□□□□ 0.29
ERCC4-207ENST00000575156 EDC3Q96F86 508 aaKnown RBP16.86■□□□□ 0.29
ERCC4-207ENST00000575156 WTIPA6NIX2 430 aaPredicted RBP16.85■□□□□ 0.29
ERCC4-207ENST00000575156 ATP5JP18859 108 aa16.85■□□□□ 0.29
ERCC4-207ENST00000575156 RPS8P62241 208 aaKnown RBP16.85■□□□□ 0.29
ERCC4-207ENST00000575156 DDX46Q7L014 1031 aaKnown RBP16.85■□□□□ 0.29
ERCC4-207ENST00000575156 BSDC1Q9NW68 430 aaPredicted RBP16.85■□□□□ 0.29
ERCC4-207ENST00000575156 FGFR2P21802 821 aa16.84■□□□□ 0.29
ERCC4-207ENST00000575156 CRY2Q49AN0 593 aa16.84■□□□□ 0.29
ERCC4-207ENST00000575156 MINPP1Q9UNW1 487 aa16.84■□□□□ 0.29
ERCC4-207ENST00000575156 PARP3Q9Y6F1 533 aa16.84■□□□□ 0.29
ERCC4-207ENST00000575156 CHMLP26374 656 aa16.83■□□□□ 0.28
ERCC4-207ENST00000575156 PUM3Q15397 648 aaKnown RBP16.83■□□□□ 0.28
ERCC4-207ENST00000575156 CNTROBQ8N137 903 aa16.83■□□□□ 0.28
ERCC4-207ENST00000575156 GOLGB1Q14789 3259 aaKnown RBP16.83■□□□□ 0.28
ERCC4-207ENST00000575156 GORABQ5T7V8 394 aa16.82■□□□□ 0.28
ERCC4-207ENST00000575156 RPGRQ92834 1020 aaKnown RBP16.82■□□□□ 0.28
ERCC4-207ENST00000575156 DNAJC2Q99543 621 aaKnown RBP16.82■□□□□ 0.28
ERCC4-207ENST00000575156 GRAPQ13588 217 aa16.82■□□□□ 0.28
ERCC4-207ENST00000575156 SCARF1Q14162 830 aa16.82■□□□□ 0.28
ERCC4-207ENST00000575156 GRAPLQ8TC17 118 aaPredicted RBP16.82■□□□□ 0.28
ERCC4-207ENST00000575156 LPIN2Q92539 896 aa16.82■□□□□ 0.28
ERCC4-207ENST00000575156 UPF1Q92900 1129 aaKnown RBP eCLIP16.82■□□□□ 0.28
ERCC4-207ENST00000575156 NRXN2Q9P2S2 1712 aa16.82■□□□□ 0.28
ERCC4-207ENST00000575156 QSER1Q2KHR3 1735 aa16.81■□□□□ 0.28
ERCC4-207ENST00000575156 KLRG2A4D1S0 409 aaPredicted RBP16.81■□□□□ 0.28
ERCC4-207ENST00000575156 HAUS7Q99871 368 aa16.81■□□□□ 0.28
ERCC4-207ENST00000575156 BRIP1Q9BX63 1249 aa16.81■□□□□ 0.28
ERCC4-207ENST00000575156 IL25Q9H293 177 aa16.81■□□□□ 0.28
ERCC4-207ENST00000575156 EVI5LQ96CN4 794 aa16.81■□□□□ 0.28
ERCC4-207ENST00000575156 ANKRD31Q8N7Z5 1873 aa16.8■□□□□ 0.28
ERCC4-207ENST00000575156 IFIT1P09914 478 aaKnown RBP16.8■□□□□ 0.28
ERCC4-207ENST00000575156 PHKA1P46020 1223 aa16.8■□□□□ 0.28
ERCC4-207ENST00000575156 CCDC158Q5M9N0 1113 aa16.8■□□□□ 0.28
ERCC4-207ENST00000575156 TTC39AQ5SRH9 613 aa16.8■□□□□ 0.28
ERCC4-207ENST00000575156 PI16Q6UXB8 463 aa16.8■□□□□ 0.28
ERCC4-207ENST00000575156 SNRKQ9NRH2 765 aa16.8■□□□□ 0.28
ERCC4-207ENST00000575156 CHGBP05060 677 aa16.79■□□□□ 0.28
ERCC4-207ENST00000575156 SLC5A1P13866 664 aa16.79■□□□□ 0.28
ERCC4-207ENST00000575156 CCDC102BQ68D86 513 aa16.79■□□□□ 0.28
ERCC4-207ENST00000575156 CASC1Q6TDU7 716 aa16.79■□□□□ 0.28
ERCC4-207ENST00000575156 ESYT1Q9BSJ8 1104 aa16.79■□□□□ 0.28
ERCC4-207ENST00000575156 ANTXR1Q9H6X2 564 aa16.79■□□□□ 0.28
ERCC4-207ENST00000575156 GOLIM4O00461 696 aa16.78■□□□□ 0.28
ERCC4-207ENST00000575156 HOXA10P31260 410 aaPredicted RBP16.78■□□□□ 0.28
ERCC4-207ENST00000575156 RBM17Q96I25 401 aaKnown RBP16.78■□□□□ 0.28
ERCC4-207ENST00000575156 TBC1D32Q96NH3 1257 aa16.78■□□□□ 0.28
ERCC4-207ENST00000575156 SRGNP10124 158 aa16.77■□□□□ 0.28
ERCC4-207ENST00000575156 KLRK1P26718 216 aa16.77■□□□□ 0.28
ERCC4-207ENST00000575156 MCAMP43121 646 aa16.77■□□□□ 0.28
ERCC4-207ENST00000575156 BCAMP50895 628 aa16.77■□□□□ 0.28
ERCC4-207ENST00000575156 FSD1Q9BTV5 496 aa16.77■□□□□ 0.28
ERCC4-207ENST00000575156 UPF2Q9HAU5 1272 aaKnown RBP16.77■□□□□ 0.28
ERCC4-207ENST00000575156 FKBP4Q02790 459 aaKnown RBP eCLIP16.77■□□□□ 0.27
ERCC4-207ENST00000575156 CWC27Q6UX04 472 aaKnown RBP16.77■□□□□ 0.27
ERCC4-207ENST00000575156 PAG1Q9NWQ8 432 aa16.77■□□□□ 0.27
ERCC4-207ENST00000575156 A0A1B0GUL6 1792 aa16.77■□□□□ 0.27
ERCC4-207ENST00000575156 AK9Q5TCS8 1911 aa16.76■□□□□ 0.27
ERCC4-207ENST00000575156 ZAP70P43403 619 aa16.76■□□□□ 0.27
ERCC4-207ENST00000575156 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.76■□□□□ 0.27
ERCC4-207ENST00000575156 C22orf23Q9BZE7 217 aa16.76■□□□□ 0.27
ERCC4-207ENST00000575156 GYG1P46976 350 aa16.76■□□□□ 0.27
ERCC4-207ENST00000575156 UBE4AQ14139 1066 aa16.76■□□□□ 0.27
ERCC4-207ENST00000575156 SLFNL1Q499Z3 407 aa16.76■□□□□ 0.27
ERCC4-207ENST00000575156 FAM227BQ96M60 508 aa16.76■□□□□ 0.27
ERCC4-207ENST00000575156 CRAMP1Q96RY5 1269 aa16.76■□□□□ 0.27
ERCC4-207ENST00000575156 ZBTB7AO95365 584 aa16.75■□□□□ 0.27
ERCC4-207ENST00000575156 PDE6BP35913 854 aa16.75■□□□□ 0.27
ERCC4-207ENST00000575156 DIAPH3Q9NSV4 1193 aa16.75■□□□□ 0.27
ERCC4-207ENST00000575156 ARAP2Q8WZ64 1704 aa16.75■□□□□ 0.27
ERCC4-207ENST00000575156 ARID4AP29374 1257 aaPredicted RBP16.74■□□□□ 0.27
ERCC4-207ENST00000575156 R3HDM1Q15032 1099 aaKnown RBP16.74■□□□□ 0.27
ERCC4-207ENST00000575156 ANKRD2Q9GZV1 360 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms