RNA–Protein interactions for RNA: ENST00000574781.1

ERCC4-206, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, human

TSL 3

Gene ERCC4, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERCC4-206	ENST00000574781	PDIA6	Q15084	440 aa		10.46	□□□□□ -0.73
ERCC4-206	ENST00000574781	DEFB115	Q30KQ5	88 aa		10.46	□□□□□ -0.73
ERCC4-206	ENST00000574781	CC2D2B	Q6DHV5	1058 aa		10.46	□□□□□ -0.73
ERCC4-206	ENST00000574781	PPP1R42	Q7Z4L9	355 aa		10.46	□□□□□ -0.73
ERCC4-206	ENST00000574781	PLPP6	Q8IY26	295 aa		10.46	□□□□□ -0.73
ERCC4-206	ENST00000574781	CCDC146	Q8IYE0	955 aa		10.46	□□□□□ -0.73
ERCC4-206	ENST00000574781	PTCD2	Q8WV60	388 aa	Known RBP	10.46	□□□□□ -0.73
ERCC4-206	ENST00000574781	NLRP3	Q96P20	1036 aa		10.46	□□□□□ -0.73
ERCC4-206	ENST00000574781	UTP14A	Q9BVJ6	771 aa	Known RBP	10.46	□□□□□ -0.73
ERCC4-206	ENST00000574781	TMX4	Q9H1E5	349 aa	Predicted RBP	10.46	□□□□□ -0.73
ERCC4-206	ENST00000574781	ABT1	Q9ULW3	272 aa	Known RBP	10.46	□□□□□ -0.73
ERCC4-206	ENST00000574781	LAS1L	Q9Y4W2	734 aa	Known RBP	10.46	□□□□□ -0.73
ERCC4-206	ENST00000574781	CNTNAP1	P78357	1384 aa		10.46	□□□□□ -0.74
ERCC4-206	ENST00000574781	HCLS1	P14317	486 aa	Predicted RBP	10.45	□□□□□ -0.74
ERCC4-206	ENST00000574781	LMOD1	P29536	600 aa	Predicted RBP	10.45	□□□□□ -0.74
ERCC4-206	ENST00000574781	AOC3	Q16853	763 aa		10.45	□□□□□ -0.74
ERCC4-206	ENST00000574781	COPS6	Q7L5N1	327 aa		10.45	□□□□□ -0.74
ERCC4-206	ENST00000574781	AIDA	Q96BJ3	306 aa		10.45	□□□□□ -0.74
ERCC4-206	ENST00000574781	CRAMP1	Q96RY5	1269 aa		10.45	□□□□□ -0.74
ERCC4-206	ENST00000574781	TRAF5	O00463	557 aa		10.44	□□□□□ -0.74
ERCC4-206	ENST00000574781	PPIP5K2	O43314	1243 aa		10.44	□□□□□ -0.74
ERCC4-206	ENST00000574781	TMPO	P42166	694 aa	Known RBP	10.44	□□□□□ -0.74
ERCC4-206	ENST00000574781	SCNN1D	P51172	638 aa		10.44	□□□□□ -0.74
ERCC4-206	ENST00000574781	LBX1	P52954	281 aa		10.44	□□□□□ -0.74
ERCC4-206	ENST00000574781	KRT24	Q2M2I5	525 aa		10.44	□□□□□ -0.74
ERCC4-206	ENST00000574781	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	10.44	□□□□□ -0.74
ERCC4-206	ENST00000574781	LRP10	Q7Z4F1	713 aa		10.44	□□□□□ -0.74
ERCC4-206	ENST00000574781	NIM1K	Q8IY84	436 aa		10.44	□□□□□ -0.74
ERCC4-206	ENST00000574781	XAGE3	Q8WTP9	111 aa		10.44	□□□□□ -0.74
ERCC4-206	ENST00000574781	LSM11	P83369	360 aa	Known RBP eCLIP	10.43	□□□□□ -0.74
ERCC4-206	ENST00000574781	DDX10	Q13206	875 aa	Known RBP	10.43	□□□□□ -0.74
ERCC4-206	ENST00000574781	PARP10	Q53GL7	1025 aa		10.43	□□□□□ -0.74
ERCC4-206	ENST00000574781	SLC10A5	Q5PT55	438 aa		10.43	□□□□□ -0.74
ERCC4-206	ENST00000574781	DDX21	Q9NR30	783 aa	Known RBP eCLIP	10.43	□□□□□ -0.74
ERCC4-206	ENST00000574781	TRMT112	Q9UI30	125 aa	Known RBP	10.43	□□□□□ -0.74
ERCC4-206	ENST00000574781	ATP6V0A2	Q9Y487	856 aa		10.43	□□□□□ -0.74
ERCC4-206	ENST00000574781	WDR33	Q9C0J8	1336 aa	Known RBP	10.42	□□□□□ -0.74
ERCC4-206	ENST00000574781	COL4A5	P29400	1685 aa		10.42	□□□□□ -0.74
ERCC4-206	ENST00000574781	RAD17	O75943	681 aa		10.42	□□□□□ -0.74
ERCC4-206	ENST00000574781	CTCF	P49711	727 aa	Predicted RBP	10.42	□□□□□ -0.74
ERCC4-206	ENST00000574781	CXCL9	Q07325	125 aa		10.42	□□□□□ -0.74
ERCC4-206	ENST00000574781	GRIPAP1	Q4V328	841 aa		10.42	□□□□□ -0.74
ERCC4-206	ENST00000574781	NLRP10	Q86W26	655 aa		10.42	□□□□□ -0.74
ERCC4-206	ENST00000574781	WBP1L	Q9NX94	342 aa		10.42	□□□□□ -0.74
ERCC4-206	ENST00000574781	ABCC4	O15439	1325 aa		10.41	□□□□□ -0.74
ERCC4-206	ENST00000574781	ERBB4	Q15303	1308 aa		10.41	□□□□□ -0.74
ERCC4-206	ENST00000574781	RASSF10	A6NK89	507 aa		10.41	□□□□□ -0.74
ERCC4-206	ENST00000574781	BBOX1	O75936	387 aa		10.41	□□□□□ -0.74
ERCC4-206	ENST00000574781	TCIRG1	Q13488	830 aa		10.41	□□□□□ -0.74
ERCC4-206	ENST00000574781	RTL5	Q5HYW3	569 aa	Predicted RBP	10.41	□□□□□ -0.74
ERCC4-206	ENST00000574781	PPP1R15B	Q5SWA1	713 aa		10.41	□□□□□ -0.74
ERCC4-206	ENST00000574781	CST9	Q5W186	159 aa		10.41	□□□□□ -0.74
ERCC4-206	ENST00000574781	DPP8	Q6V1X1	898 aa	Predicted RBP	10.41	□□□□□ -0.74
ERCC4-206	ENST00000574781	USP50	Q70EL3	339 aa	Predicted RBP	10.41	□□□□□ -0.74
ERCC4-206	ENST00000574781	DDX46	Q7L014	1031 aa	Known RBP	10.41	□□□□□ -0.74
ERCC4-206	ENST00000574781	SP8	Q8IXZ3	490 aa		10.41	□□□□□ -0.74
ERCC4-206	ENST00000574781	MPND	Q8N594	471 aa		10.41	□□□□□ -0.74
ERCC4-206	ENST00000574781	ZNRF3	Q9ULT6	936 aa		10.41	□□□□□ -0.74
ERCC4-206	ENST00000574781	PCDHGA4	Q9Y5G9	962 aa		10.41	□□□□□ -0.74
ERCC4-206	ENST00000574781	SCN4A	P35499	1836 aa		10.41	□□□□□ -0.74
ERCC4-206	ENST00000574781	NUP98	P52948	1817 aa		10.41	□□□□□ -0.74
ERCC4-206	ENST00000574781	ARFGEF2	Q9Y6D5	1785 aa		10.41	□□□□□ -0.74
ERCC4-206	ENST00000574781	SNED1	Q8TER0	1413 aa		10.41	□□□□□ -0.74
ERCC4-206	ENST00000574781	DLG5	Q8TDM6	1919 aa		10.41	□□□□□ -0.74
ERCC4-206	ENST00000574781	ATP5J2-PTCD1	G3V325	749 aa		10.4	□□□□□ -0.74
ERCC4-206	ENST00000574781	GMPS	P49915	693 aa	Predicted RBP	10.4	□□□□□ -0.74
ERCC4-206	ENST00000574781	RALBP1	Q15311	655 aa		10.4	□□□□□ -0.74
ERCC4-206	ENST00000574781	ARSI	Q5FYB1	569 aa		10.4	□□□□□ -0.74
ERCC4-206	ENST00000574781	CYP4F22	Q6NT55	531 aa		10.4	□□□□□ -0.74
ERCC4-206	ENST00000574781	DDX27	Q96GQ7	796 aa	Known RBP	10.4	□□□□□ -0.74
ERCC4-206	ENST00000574781	GPR101	Q96P66	508 aa	Predicted RBP	10.4	□□□□□ -0.74
ERCC4-206	ENST00000574781	BCL2L13	Q9BXK5	485 aa		10.4	□□□□□ -0.74
ERCC4-206	ENST00000574781	PRDM10	Q9NQV6	1147 aa		10.4	□□□□□ -0.74
ERCC4-206	ENST00000574781	GPRC5D	Q9NZD1	345 aa		10.4	□□□□□ -0.74
ERCC4-206	ENST00000574781	CHPF2	Q9P2E5	772 aa		10.4	□□□□□ -0.74
ERCC4-206	ENST00000574781	SHTN1	A0MZ66	631 aa		10.39	□□□□□ -0.75
ERCC4-206	ENST00000574781	CHL1	O00533	1208 aa		10.39	□□□□□ -0.75
ERCC4-206	ENST00000574781	MAP2K1	Q02750	393 aa	Predicted RBP	10.39	□□□□□ -0.75
ERCC4-206	ENST00000574781	LMOD3	Q0VAK6	560 aa		10.39	□□□□□ -0.75
ERCC4-206	ENST00000574781	HSP90AB3P	Q58FF7	597 aa		10.39	□□□□□ -0.75
ERCC4-206	ENST00000574781	CIAPIN1	Q6FI81	312 aa		10.39	□□□□□ -0.75
ERCC4-206	ENST00000574781	DLK2	Q6UY11	383 aa		10.39	□□□□□ -0.75
ERCC4-206	ENST00000574781	SUPT20H	Q8NEM7	779 aa		10.39	□□□□□ -0.75
ERCC4-206	ENST00000574781	FAM89A	Q96GI7	184 aa		10.39	□□□□□ -0.75
ERCC4-206	ENST00000574781	CAPNS2	Q96L46	248 aa		10.39	□□□□□ -0.75
ERCC4-206	ENST00000574781	GLIS2	Q9BZE0	524 aa	Predicted RBP	10.39	□□□□□ -0.75
ERCC4-206	ENST00000574781	ZNF408	Q9H9D4	720 aa		10.39	□□□□□ -0.75
ERCC4-206	ENST00000574781	ADARB2	Q9NS39	739 aa	Known RBP	10.39	□□□□□ -0.75
ERCC4-206	ENST00000574781	BABAM1	Q9NWV8	329 aa		10.39	□□□□□ -0.75
ERCC4-206	ENST00000574781	TSKS	Q9UJT2	592 aa		10.39	□□□□□ -0.75
ERCC4-206	ENST00000574781	KDM3B	Q7LBC6	1761 aa		10.39	□□□□□ -0.75
ERCC4-206	ENST00000574781	IBTK	Q9P2D0	1353 aa	Predicted RBP	10.39	□□□□□ -0.75
ERCC4-206	ENST00000574781	SH3TC1	Q8TE82	1336 aa		10.38	□□□□□ -0.75
ERCC4-206	ENST00000574781	AOC2	O75106	756 aa		10.38	□□□□□ -0.75
ERCC4-206	ENST00000574781	CELF2	O95319	508 aa	Known RBP	10.38	□□□□□ -0.75
ERCC4-206	ENST00000574781	HSPA8	P11142	646 aa	Known RBP	10.38	□□□□□ -0.75
ERCC4-206	ENST00000574781	HIRA	P54198	1017 aa	Predicted RBP	10.38	□□□□□ -0.75
ERCC4-206	ENST00000574781	GRAP	Q13588	217 aa		10.38	□□□□□ -0.75
ERCC4-206	ENST00000574781	GRAPL	Q8TC17	118 aa	Predicted RBP	10.38	□□□□□ -0.75
ERCC4-206	ENST00000574781	LARP6	Q9BRS8	491 aa	Known RBP	10.38	□□□□□ -0.75

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