RNA–Protein interactions for RNA: ENST00000573607.5

TOM1L1-216, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1L1, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-216ENST00000573607 TCF3P15923 654 aa9.87□□□□□ -0.83
TOM1L1-216ENST00000573607 PCBP4P57723 403 aaKnown RBP9.87□□□□□ -0.83
TOM1L1-216ENST00000573607 HFE2Q6ZVN8 426 aa9.87□□□□□ -0.83
TOM1L1-216ENST00000573607 SYT9Q86SS6 491 aa9.87□□□□□ -0.83
TOM1L1-216ENST00000573607 TMEM87AQ8NBN3 555 aa9.87□□□□□ -0.83
TOM1L1-216ENST00000573607 BCO2Q9BYV7 579 aa9.87□□□□□ -0.83
TOM1L1-216ENST00000573607 BCL11AQ9H165 835 aa9.87□□□□□ -0.83
TOM1L1-216ENST00000573607 C12orf49Q9H741 205 aa9.87□□□□□ -0.83
TOM1L1-216ENST00000573607 J3QW42 95 aa9.86□□□□□ -0.83
TOM1L1-216ENST00000573607 BMP4P12644 408 aa9.86□□□□□ -0.83
TOM1L1-216ENST00000573607 EIF4BP23588 611 aaKnown RBP9.86□□□□□ -0.83
TOM1L1-216ENST00000573607 PLAURQ03405 335 aa9.86□□□□□ -0.83
TOM1L1-216ENST00000573607 TBC1D8BQ0IIM8 1120 aa9.86□□□□□ -0.83
TOM1L1-216ENST00000573607 GRM2Q14416 872 aa9.86□□□□□ -0.83
TOM1L1-216ENST00000573607 KLF15Q9UIH9 416 aa9.86□□□□□ -0.83
TOM1L1-216ENST00000573607 KIF4AO95239 1232 aa9.85□□□□□ -0.83
TOM1L1-216ENST00000573607 MX2P20592 715 aa9.85□□□□□ -0.83
TOM1L1-216ENST00000573607 SOX18P35713 384 aa9.85□□□□□ -0.83
TOM1L1-216ENST00000573607 C9orf131Q5VYM1 1079 aa9.85□□□□□ -0.83
TOM1L1-216ENST00000573607 NCAPG2Q86XI2 1143 aa9.85□□□□□ -0.83
TOM1L1-216ENST00000573607 FRMD6Q96NE9 622 aa9.85□□□□□ -0.83
TOM1L1-216ENST00000573607 CNTNAP3BQ96NU0 1288 aa9.85□□□□□ -0.83
TOM1L1-216ENST00000573607 CNTNAP3Q9BZ76 1288 aa9.85□□□□□ -0.83
TOM1L1-216ENST00000573607 SUV39H2Q9H5I1 410 aa9.85□□□□□ -0.83
TOM1L1-216ENST00000573607 EFCC1Q9HA90 598 aa9.85□□□□□ -0.83
TOM1L1-216ENST00000573607 H3BM21 787 aa9.84□□□□□ -0.83
TOM1L1-216ENST00000573607 EDN3P14138 238 aa9.84□□□□□ -0.83
TOM1L1-216ENST00000573607 HYAL2Q12891 473 aa9.84□□□□□ -0.83
TOM1L1-216ENST00000573607 ZNF468Q5VIY5 522 aaPredicted RBP9.84□□□□□ -0.83
TOM1L1-216ENST00000573607 KIAA0319Q5VV43 1072 aa9.84□□□□□ -0.83
TOM1L1-216ENST00000573607 GLIS3Q8NEA6 775 aa9.84□□□□□ -0.83
TOM1L1-216ENST00000573607 HHIPQ96QV1 700 aa9.84□□□□□ -0.83
TOM1L1-216ENST00000573607 EHD4Q9H223 541 aa9.84□□□□□ -0.83
TOM1L1-216ENST00000573607 DNAJB12Q9NXW2 375 aaKnown RBP9.84□□□□□ -0.83
TOM1L1-216ENST00000573607 NRLP54845 237 aa9.83□□□□□ -0.84
TOM1L1-216ENST00000573607 NEUROD1Q13562 356 aa9.83□□□□□ -0.84
TOM1L1-216ENST00000573607 CEP120Q8N960 986 aa9.83□□□□□ -0.84
TOM1L1-216ENST00000573607 ZKSCAN3Q9BRR0 538 aa9.83□□□□□ -0.84
TOM1L1-216ENST00000573607 UBE2OQ9C0C9 1292 aaKnown RBP9.83□□□□□ -0.84
TOM1L1-216ENST00000573607 LOC102724428A0A0B4J2F2 783 aa9.82□□□□□ -0.84
TOM1L1-216ENST00000573607 USP17L7P0C7H9 530 aa9.82□□□□□ -0.84
TOM1L1-216ENST00000573607 HOXD8P13378 290 aaPredicted RBP9.82□□□□□ -0.84
TOM1L1-216ENST00000573607 SIK1P57059 783 aa9.82□□□□□ -0.84
TOM1L1-216ENST00000573607 HDLBPQ00341 1268 aaKnown RBP9.82□□□□□ -0.84
TOM1L1-216ENST00000573607 RNFT1Q5M7Z0 435 aa9.82□□□□□ -0.84
TOM1L1-216ENST00000573607 ZNF787Q6DD87 383 aa9.82□□□□□ -0.84
TOM1L1-216ENST00000573607 TRPM4Q8TD43 1214 aa9.82□□□□□ -0.84
TOM1L1-216ENST00000573607 OSMRQ99650 979 aa9.82□□□□□ -0.84
TOM1L1-216ENST00000573607 GIPC1O14908 333 aa9.81□□□□□ -0.84
TOM1L1-216ENST00000573607 GPLD1P80108 840 aa9.81□□□□□ -0.84
TOM1L1-216ENST00000573607 ATP11AP98196 1134 aa9.81□□□□□ -0.84
TOM1L1-216ENST00000573607 MEI1Q5TIA1 1274 aa9.81□□□□□ -0.84
TOM1L1-216ENST00000573607 TCF12Q99081 682 aa9.81□□□□□ -0.84
TOM1L1-216ENST00000573607 LIN7BQ9HAP6 207 aa9.81□□□□□ -0.84
TOM1L1-216ENST00000573607 ERBB4Q15303 1308 aa9.81□□□□□ -0.84
TOM1L1-216ENST00000573607 NFKBIEO00221 500 aa9.8□□□□□ -0.84
TOM1L1-216ENST00000573607 SCAMP3O14828 347 aaKnown RBP9.8□□□□□ -0.84
TOM1L1-216ENST00000573607 SIN3BO75182 1162 aa9.8□□□□□ -0.84
TOM1L1-216ENST00000573607 CRELD1Q96HD1 420 aa9.8□□□□□ -0.84
TOM1L1-216ENST00000573607 RASSF4Q9H2L5 321 aa9.8□□□□□ -0.84
TOM1L1-216ENST00000573607 DZANK1Q9NVP4 752 aa9.8□□□□□ -0.84
TOM1L1-216ENST00000573607 FAM8A1Q9UBU6 413 aa9.8□□□□□ -0.84
TOM1L1-216ENST00000573607 METTL12A8MUP2 240 aa9.79□□□□□ -0.84
TOM1L1-216ENST00000573607 FCGRTP55899 365 aa9.79□□□□□ -0.84
TOM1L1-216ENST00000573607 FANCCQ00597 558 aa9.79□□□□□ -0.84
TOM1L1-216ENST00000573607 COL25A1Q9BXS0 654 aaPredicted RBP9.79□□□□□ -0.84
TOM1L1-216ENST00000573607 MBIPQ9NS73 344 aa9.79□□□□□ -0.84
TOM1L1-216ENST00000573607 NEURL1BA8MQ27 555 aa9.78□□□□□ -0.84
TOM1L1-216ENST00000573607 TERTO14746 1132 aaKnown RBP9.78□□□□□ -0.84
TOM1L1-216ENST00000573607 CPB1P15086 417 aa9.78□□□□□ -0.84
TOM1L1-216ENST00000573607 FCHSD1Q86WN1 690 aa9.78□□□□□ -0.84
TOM1L1-216ENST00000573607 NPAS3Q8IXF0 933 aa9.78□□□□□ -0.84
TOM1L1-216ENST00000573607 SPACA7Q96KW9 195 aa9.78□□□□□ -0.84
TOM1L1-216ENST00000573607 ABCB6Q9NP58 842 aa9.78□□□□□ -0.84
TOM1L1-216ENST00000573607 NAGPAQ9UK23 515 aa9.78□□□□□ -0.84
TOM1L1-216ENST00000573607 EIF2AK2P19525 551 aaKnown RBP9.77□□□□□ -0.85
TOM1L1-216ENST00000573607 ITGAEP38570 1179 aa9.77□□□□□ -0.85
TOM1L1-216ENST00000573607 GRIA4P48058 902 aa9.77□□□□□ -0.85
TOM1L1-216ENST00000573607 KRT76Q01546 638 aa9.77□□□□□ -0.85
TOM1L1-216ENST00000573607 SPRED3Q2MJR0 410 aa9.77□□□□□ -0.85
TOM1L1-216ENST00000573607 ADAMTSL4Q6UY14 1074 aa9.77□□□□□ -0.85
TOM1L1-216ENST00000573607 METTL16Q86W50 562 aaKnown RBP9.77□□□□□ -0.85
TOM1L1-216ENST00000573607 CCNJLQ8IV13 435 aa9.77□□□□□ -0.85
TOM1L1-216ENST00000573607 C3orf58Q8NDZ4 430 aa9.77□□□□□ -0.85
TOM1L1-216ENST00000573607 TNFRSF25Q93038 417 aa9.77□□□□□ -0.85
TOM1L1-216ENST00000573607 SLC6A14Q9UN76 642 aa9.77□□□□□ -0.85
TOM1L1-216ENST00000573607 IGF1RP08069 1367 aa9.76□□□□□ -0.85
TOM1L1-216ENST00000573607 TMEM238LA0A1B0GVL6 79 aa9.76□□□□□ -0.85
TOM1L1-216ENST00000573607 VSIG8P0DPA2 414 aa9.76□□□□□ -0.85
TOM1L1-216ENST00000573607 ARAFP10398 606 aa9.76□□□□□ -0.85
TOM1L1-216ENST00000573607 PRPF40BQ6NWY9 871 aaKnown RBP9.76□□□□□ -0.85
TOM1L1-216ENST00000573607 FAM35AQ86V20 835 aa9.76□□□□□ -0.85
TOM1L1-216ENST00000573607 NXPE3Q969Y0 559 aa9.76□□□□□ -0.85
TOM1L1-216ENST00000573607 OXCT2Q9BYC2 517 aaPredicted RBP9.76□□□□□ -0.85
TOM1L1-216ENST00000573607 PBX4Q9BYU1 374 aa9.76□□□□□ -0.85
TOM1L1-216ENST00000573607 SRCIN1Q9C0H9 1055 aa9.76□□□□□ -0.85
TOM1L1-216ENST00000573607 AVENQ9NQS1 362 aaPredicted RBP9.76□□□□□ -0.85
TOM1L1-216ENST00000573607 GGA1Q9UJY5 639 aa9.76□□□□□ -0.85
TOM1L1-216ENST00000573607 TRAK1Q9UPV9 953 aa9.76□□□□□ -0.85
TOM1L1-216ENST00000573607 USP31Q70CQ4 1352 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms