RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 GGA1Q9UJY5 639 aa16.17■□□□□ 0.18
NPLOC4-213ENST00000573519 ADAMTSL1Q8N6G6 1762 aa16.17■□□□□ 0.18
NPLOC4-213ENST00000573519 ZNF521Q96K83 1311 aa16.17■□□□□ 0.18
NPLOC4-213ENST00000573519 PASKQ96RG2 1323 aa16.17■□□□□ 0.18
NPLOC4-213ENST00000573519 ECE2O60344 883 aa16.16■□□□□ 0.18
NPLOC4-213ENST00000573519 ITGBL1O95965 494 aaPredicted RBP16.16■□□□□ 0.18
NPLOC4-213ENST00000573519 ADARB2Q9NS39 739 aaKnown RBP16.16■□□□□ 0.18
NPLOC4-213ENST00000573519 PODXL2Q9NZ53 605 aa16.16■□□□□ 0.18
NPLOC4-213ENST00000573519 SLC4A10Q6U841 1118 aa16.15■□□□□ 0.18
NPLOC4-213ENST00000573519 MIER1Q8N108 512 aa16.15■□□□□ 0.18
NPLOC4-213ENST00000573519 MKRN1Q9UHC7 482 aaKnown RBP16.15■□□□□ 0.18
NPLOC4-213ENST00000573519 ZBTB12Q9Y330 459 aaPredicted RBP16.15■□□□□ 0.18
NPLOC4-213ENST00000573519 XDHP47989 1333 aa16.15■□□□□ 0.18
NPLOC4-213ENST00000573519 TMEM88BA6NKF7 163 aa16.14■□□□□ 0.17
NPLOC4-213ENST00000573519 E9PSI1 815 aa16.14■□□□□ 0.17
NPLOC4-213ENST00000573519 PSMD14O00487 310 aa16.14■□□□□ 0.17
NPLOC4-213ENST00000573519 IGHMBP2P38935 993 aaKnown RBP16.14■□□□□ 0.17
NPLOC4-213ENST00000573519 JMYQ8N9B5 988 aa16.14■□□□□ 0.17
NPLOC4-213ENST00000573519 CNOT7Q9UIV1 285 aaKnown RBP16.14■□□□□ 0.17
NPLOC4-213ENST00000573519 H7C1D1 291 aa16.13■□□□□ 0.17
NPLOC4-213ENST00000573519 ITGA6P23229 1130 aa16.13■□□□□ 0.17
NPLOC4-213ENST00000573519 ATP2B4P23634 1241 aa16.13■□□□□ 0.17
NPLOC4-213ENST00000573519 CASP7P55210 303 aa16.13■□□□□ 0.17
NPLOC4-213ENST00000573519 FAM161AQ3B820 660 aa16.13■□□□□ 0.17
NPLOC4-213ENST00000573519 BEND3Q5T5X7 828 aa16.13■□□□□ 0.17
NPLOC4-213ENST00000573519 MICALL2Q8IY33 904 aa16.13■□□□□ 0.17
NPLOC4-213ENST00000573519 KCNQ5Q9NR82 932 aa16.13■□□□□ 0.17
NPLOC4-213ENST00000573519 BSDC1Q9NW68 430 aaPredicted RBP16.13■□□□□ 0.17
NPLOC4-213ENST00000573519 CHMP3Q9Y3E7 222 aa16.13■□□□□ 0.17
NPLOC4-213ENST00000573519 RTL9Q8NET4 1388 aa16.13■□□□□ 0.17
NPLOC4-213ENST00000573519 SPEF2Q9C093 1822 aa16.12■□□□□ 0.17
NPLOC4-213ENST00000573519 MYH3P11055 1940 aa16.12■□□□□ 0.17
NPLOC4-213ENST00000573519 SHTN1A0MZ66 631 aa16.12■□□□□ 0.17
NPLOC4-213ENST00000573519 MPHOSPH8Q99549 860 aa16.12■□□□□ 0.17
NPLOC4-213ENST00000573519 PLA2G12BQ9BX93 195 aa16.12■□□□□ 0.17
NPLOC4-213ENST00000573519 MINPP1Q9UNW1 487 aa16.12■□□□□ 0.17
NPLOC4-213ENST00000573519 CACNA1FO60840 1977 aa16.11■□□□□ 0.17
NPLOC4-213ENST00000573519 C9orf78Q9NZ63 289 aaPredicted RBP16.11■□□□□ 0.17
NPLOC4-213ENST00000573519 ANKRD18BA2A2Z9 1011 aa16.1■□□□□ 0.17
NPLOC4-213ENST00000573519 WTIPA6NIX2 430 aaPredicted RBP16.1■□□□□ 0.17
NPLOC4-213ENST00000573519 CSF1RP07333 972 aa16.1■□□□□ 0.17
NPLOC4-213ENST00000573519 FMR1Q06787 632 aaKnown RBP eCLIP16.1■□□□□ 0.17
NPLOC4-213ENST00000573519 SLFN5Q08AF3 891 aa16.1■□□□□ 0.17
NPLOC4-213ENST00000573519 TRPM4Q8TD43 1214 aa16.1■□□□□ 0.17
NPLOC4-213ENST00000573519 CDCA7LQ96GN5 454 aa16.1■□□□□ 0.17
NPLOC4-213ENST00000573519 SRCIN1Q9C0H9 1055 aa16.1■□□□□ 0.17
NPLOC4-213ENST00000573519 ABT1Q9ULW3 272 aaKnown RBP16.1■□□□□ 0.17
NPLOC4-213ENST00000573519 GRM8O00222 908 aa16.09■□□□□ 0.17
NPLOC4-213ENST00000573519 TRAF5O00463 557 aa16.09■□□□□ 0.17
NPLOC4-213ENST00000573519 RPS12P25398 132 aaKnown RBP16.09■□□□□ 0.17
NPLOC4-213ENST00000573519 CCT4P50991 539 aaKnown RBP16.09■□□□□ 0.17
NPLOC4-213ENST00000573519 TBC1D10BQ4KMP7 808 aaPredicted RBP16.09■□□□□ 0.17
NPLOC4-213ENST00000573519 RBM26Q5T8P6 1007 aaKnown RBP16.09■□□□□ 0.17
NPLOC4-213ENST00000573519 SAMD7Q7Z3H4 446 aa16.09■□□□□ 0.17
NPLOC4-213ENST00000573519 MRPL50Q8N5N7 158 aaKnown RBP16.09■□□□□ 0.17
NPLOC4-213ENST00000573519 DPF2Q92785 391 aa16.09■□□□□ 0.17
NPLOC4-213ENST00000573519 CNTNAP1P78357 1384 aa16.09■□□□□ 0.17
NPLOC4-213ENST00000573519 ALDH1L1O75891 902 aa16.08■□□□□ 0.16
NPLOC4-213ENST00000573519 HIRAP54198 1017 aaPredicted RBP16.08■□□□□ 0.16
NPLOC4-213ENST00000573519 FOXO4P98177 505 aa16.08■□□□□ 0.16
NPLOC4-213ENST00000573519 IFIT5Q13325 482 aaKnown RBP16.08■□□□□ 0.16
NPLOC4-213ENST00000573519 GLIS2Q9BZE0 524 aaPredicted RBP16.08■□□□□ 0.16
NPLOC4-213ENST00000573519 VIL1P09327 827 aaKnown RBP16.07■□□□□ 0.16
NPLOC4-213ENST00000573519 KCNJ4P48050 445 aa16.07■□□□□ 0.16
NPLOC4-213ENST00000573519 TAF7LQ5H9L4 462 aa16.07■□□□□ 0.16
NPLOC4-213ENST00000573519 LMBR1LQ6UX01 489 aa16.07■□□□□ 0.16
NPLOC4-213ENST00000573519 FBXW7Q969H0 707 aa16.07■□□□□ 0.16
NPLOC4-213ENST00000573519 ANKRD2Q9GZV1 360 aa16.07■□□□□ 0.16
NPLOC4-213ENST00000573519 LEMD3Q9Y2U8 911 aa16.07■□□□□ 0.16
NPLOC4-213ENST00000573519 MED23Q9ULK4 1368 aa16.07■□□□□ 0.16
NPLOC4-213ENST00000573519 ZNF804BA4D1E1 1349 aa16.06■□□□□ 0.16
NPLOC4-213ENST00000573519 HSPA1AP0DMV8 641 aaKnown RBP16.06■□□□□ 0.16
NPLOC4-213ENST00000573519 HSPA1BP0DMV9 641 aaKnown RBP16.06■□□□□ 0.16
NPLOC4-213ENST00000573519 CHRNDQ07001 517 aa16.06■□□□□ 0.16
NPLOC4-213ENST00000573519 CCDC57Q2TAC2 916 aa16.06■□□□□ 0.16
NPLOC4-213ENST00000573519 DEFB115Q30KQ5 88 aa16.06■□□□□ 0.16
NPLOC4-213ENST00000573519 EPHA10Q5JZY3 1008 aa16.06■□□□□ 0.16
NPLOC4-213ENST00000573519 PAXIP1Q6ZW49 1069 aaPredicted RBP16.06■□□□□ 0.16
NPLOC4-213ENST00000573519 PODNQ7Z5L7 613 aa16.06■□□□□ 0.16
NPLOC4-213ENST00000573519 ZC3H15Q8WU90 426 aaKnown RBP16.06■□□□□ 0.16
NPLOC4-213ENST00000573519 SSH1Q8WYL5 1049 aa16.06■□□□□ 0.16
NPLOC4-213ENST00000573519 ZNF408Q9H9D4 720 aa16.06■□□□□ 0.16
NPLOC4-213ENST00000573519 PTPRCP08575 1304 aa16.05■□□□□ 0.16
NPLOC4-213ENST00000573519 USP17L3A6NCW0 530 aa16.05■□□□□ 0.16
NPLOC4-213ENST00000573519 USP17L4A6NCW7 530 aa16.05■□□□□ 0.16
NPLOC4-213ENST00000573519 EGFRP00533 1210 aa16.05■□□□□ 0.16
NPLOC4-213ENST00000573519 VEGFBP49765 207 aa16.05■□□□□ 0.16
NPLOC4-213ENST00000573519 RSBN1LQ6PCB5 846 aaPredicted RBP16.05■□□□□ 0.16
NPLOC4-213ENST00000573519 CDC37L1Q7L3B6 337 aa16.05■□□□□ 0.16
NPLOC4-213ENST00000573519 USP17L1Q7RTZ2 530 aa16.05■□□□□ 0.16
NPLOC4-213ENST00000573519 PGAP2Q9UHJ9 254 aa16.05■□□□□ 0.16
NPLOC4-213ENST00000573519 TAF5LO75529 589 aa16.04■□□□□ 0.16
NPLOC4-213ENST00000573519 CELF2O95319 508 aaKnown RBP16.04■□□□□ 0.16
NPLOC4-213ENST00000573519 GRM1Q13255 1194 aa16.04■□□□□ 0.16
NPLOC4-213ENST00000573519 KIF4BQ2VIQ3 1234 aa16.04■□□□□ 0.16
NPLOC4-213ENST00000573519 CST9Q5W186 159 aa16.04■□□□□ 0.16
NPLOC4-213ENST00000573519 USP48Q86UV5 1035 aa16.04■□□□□ 0.16
NPLOC4-213ENST00000573519 HELBQ8NG08 1087 aaPredicted RBP16.04■□□□□ 0.16
NPLOC4-213ENST00000573519 ZNF594Q96JF6 807 aaPredicted RBP16.04■□□□□ 0.16
NPLOC4-213ENST00000573519 SMC4Q9NTJ3 1288 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms