RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 ELP1O95163 1332 aa13.29□□□□□ -0.28
RPAIN-212ENST00000573126 AFDNP55196 1824 aaKnown RBP13.28□□□□□ -0.28
RPAIN-212ENST00000573126 FOSBP53539 338 aa13.28□□□□□ -0.28
RPAIN-212ENST00000573126 C17orf53Q8N3J3 647 aaPredicted RBP13.28□□□□□ -0.28
RPAIN-212ENST00000573126 ZCRB1Q8TBF4 217 aaKnown RBP13.28□□□□□ -0.28
RPAIN-212ENST00000573126 SCAND2PQ9GZW5 306 aaPredicted RBP13.28□□□□□ -0.28
RPAIN-212ENST00000573126 ARFGEF2Q9Y6D5 1785 aa13.28□□□□□ -0.28
RPAIN-212ENST00000573126 PDIA4P13667 645 aaKnown RBP13.28□□□□□ -0.28
RPAIN-212ENST00000573126 SCRN1Q12765 414 aa13.28□□□□□ -0.28
RPAIN-212ENST00000573126 LEO1Q8WVC0 666 aaPredicted RBP13.28□□□□□ -0.28
RPAIN-212ENST00000573126 PCDH11XQ9BZA7 1347 aa13.28□□□□□ -0.28
RPAIN-212ENST00000573126 PCDH11YQ9BZA8 1340 aa13.28□□□□□ -0.28
RPAIN-212ENST00000573126 H3BQV1 296 aa13.27□□□□□ -0.28
RPAIN-212ENST00000573126 RRP9O43818 475 aaKnown RBP13.27□□□□□ -0.28
RPAIN-212ENST00000573126 MAP3K11Q16584 847 aa13.27□□□□□ -0.28
RPAIN-212ENST00000573126 IFFO2Q5TF58 517 aa13.27□□□□□ -0.28
RPAIN-212ENST00000573126 PUS3Q9BZE2 481 aaKnown RBP13.27□□□□□ -0.28
RPAIN-212ENST00000573126 RFX7Q2KHR2 1363 aa13.27□□□□□ -0.28
RPAIN-212ENST00000573126 CCDC85AQ96PX6 553 aaPredicted RBP13.27□□□□□ -0.29
RPAIN-212ENST00000573126 SH3TC1Q8TE82 1336 aa13.27□□□□□ -0.29
RPAIN-212ENST00000573126 GLI3P10071 1580 aa13.27□□□□□ -0.29
RPAIN-212ENST00000573126 UQCRHLA0A096LP55 91 aa13.26□□□□□ -0.29
RPAIN-212ENST00000573126 A0A1B0GUL7 405 aa13.26□□□□□ -0.29
RPAIN-212ENST00000573126 UQCRHP07919 91 aa13.26□□□□□ -0.29
RPAIN-212ENST00000573126 IL15P40933 162 aaPredicted RBP13.26□□□□□ -0.29
RPAIN-212ENST00000573126 RBM10P98175 930 aaKnown RBP13.26□□□□□ -0.29
RPAIN-212ENST00000573126 CEBPZQ03701 1054 aaKnown RBP13.26□□□□□ -0.29
RPAIN-212ENST00000573126 DNTTIP2Q5QJE6 756 aaKnown RBP13.26□□□□□ -0.29
RPAIN-212ENST00000573126 TNMDQ9H2S6 317 aa13.26□□□□□ -0.29
RPAIN-212ENST00000573126 NAP1L2Q9ULW6 460 aaPredicted RBP13.26□□□□□ -0.29
RPAIN-212ENST00000573126 CPDO75976 1380 aa13.26□□□□□ -0.29
RPAIN-212ENST00000573126 EYA2O00167 538 aa13.26□□□□□ -0.29
RPAIN-212ENST00000573126 TYRO3Q06418 890 aa13.26□□□□□ -0.29
RPAIN-212ENST00000573126 APOBRQ0VD83 1088 aa13.26□□□□□ -0.29
RPAIN-212ENST00000573126 CHST3Q7LGC8 479 aa13.26□□□□□ -0.29
RPAIN-212ENST00000573126 SPC24Q8NBT2 197 aa13.26□□□□□ -0.29
RPAIN-212ENST00000573126 BICD2Q8TD16 824 aa13.26□□□□□ -0.29
RPAIN-212ENST00000573126 WDR17Q8IZU2 1322 aa13.26□□□□□ -0.29
RPAIN-212ENST00000573126 DCCP43146 1447 aa13.26□□□□□ -0.29
RPAIN-212ENST00000573126 NR1I2O75469 434 aa13.26□□□□□ -0.29
RPAIN-212ENST00000573126 IFIT1P09914 478 aaKnown RBP13.26□□□□□ -0.29
RPAIN-212ENST00000573126 CCT2P78371 535 aaKnown RBP13.26□□□□□ -0.29
RPAIN-212ENST00000573126 LUZP1Q86V48 1076 aa13.26□□□□□ -0.29
RPAIN-212ENST00000573126 PGBD1Q96JS3 809 aa13.26□□□□□ -0.29
RPAIN-212ENST00000573126 MRVI1Q9Y6F6 885 aa13.26□□□□□ -0.29
RPAIN-212ENST00000573126 HSPD1P10809 573 aaKnown RBP13.25□□□□□ -0.29
RPAIN-212ENST00000573126 TERF1P54274 439 aa13.25□□□□□ -0.29
RPAIN-212ENST00000573126 HSPA2P54652 639 aa13.25□□□□□ -0.29
RPAIN-212ENST00000573126 FKBP4Q02790 459 aaKnown RBP eCLIP13.25□□□□□ -0.29
RPAIN-212ENST00000573126 RESTQ13127 1097 aa13.25□□□□□ -0.29
RPAIN-212ENST00000573126 DHX32Q7L7V1 743 aaKnown RBP13.25□□□□□ -0.29
RPAIN-212ENST00000573126 CCDC191Q8NCU4 936 aa13.25□□□□□ -0.29
RPAIN-212ENST00000573126 NCOA5Q9HCD5 579 aaKnown RBP13.25□□□□□ -0.29
RPAIN-212ENST00000573126 PALLDQ8WX93 1383 aa13.25□□□□□ -0.29
RPAIN-212ENST00000573126 ABCC6O95255 1503 aa13.25□□□□□ -0.29
RPAIN-212ENST00000573126 PKD1L3Q7Z443 1732 aa13.25□□□□□ -0.29
RPAIN-212ENST00000573126 TTLL5Q6EMB2 1281 aa13.25□□□□□ -0.29
RPAIN-212ENST00000573126 BRINP3Q76B58 766 aa13.25□□□□□ -0.29
RPAIN-212ENST00000573126 FAM200AQ8TCP9 573 aa13.25□□□□□ -0.29
RPAIN-212ENST00000573126 FTOQ9C0B1 505 aaKnown RBP eCLIP13.25□□□□□ -0.29
RPAIN-212ENST00000573126 STRN4Q9NRL3 753 aa13.25□□□□□ -0.29
RPAIN-212ENST00000573126 MAST3O60307 1309 aa13.25□□□□□ -0.29
RPAIN-212ENST00000573126 ZMYM1Q5SVZ6 1142 aa13.24□□□□□ -0.29
RPAIN-212ENST00000573126 PIBF1Q8WXW3 757 aa13.24□□□□□ -0.29
RPAIN-212ENST00000573126 HELLSQ9NRZ9 838 aa13.24□□□□□ -0.29
RPAIN-212ENST00000573126 ERVV-2B6SEH9 535 aa13.24□□□□□ -0.29
RPAIN-212ENST00000573126 NOLC1Q14978 699 aaKnown RBP eCLIP13.24□□□□□ -0.29
RPAIN-212ENST00000573126 NSUN7Q8NE18 718 aaKnown RBP13.24□□□□□ -0.29
RPAIN-212ENST00000573126 DSCC1Q9BVC3 393 aa13.24□□□□□ -0.29
RPAIN-212ENST00000573126 FAM13BQ9NYF5 915 aa13.24□□□□□ -0.29
RPAIN-212ENST00000573126 PTPDC1A2A3K4 754 aa13.23□□□□□ -0.29
RPAIN-212ENST00000573126 E7EWF7 191 aa13.23□□□□□ -0.29
RPAIN-212ENST00000573126 CTDNEP1O95476 244 aa13.23□□□□□ -0.29
RPAIN-212ENST00000573126 HMGB1P09429 215 aaKnown RBP13.23□□□□□ -0.29
RPAIN-212ENST00000573126 ANO6Q4KMQ2 910 aa13.23□□□□□ -0.29
RPAIN-212ENST00000573126 GPR108Q9NPR9 543 aa13.23□□□□□ -0.29
RPAIN-212ENST00000573126 STRCP1A6NGW2 1772 aa13.23□□□□□ -0.29
RPAIN-212ENST00000573126 PLEKHG2Q9H7P9 1386 aa13.23□□□□□ -0.29
RPAIN-212ENST00000573126 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.23□□□□□ -0.29
RPAIN-212ENST00000573126 M0R2C6 588 aa13.23□□□□□ -0.29
RPAIN-212ENST00000573126 PFKFB2O60825 505 aa13.23□□□□□ -0.29
RPAIN-212ENST00000573126 RNF113AO15541 343 aaKnown RBP13.22□□□□□ -0.29
RPAIN-212ENST00000573126 IL2RBP14784 551 aa13.22□□□□□ -0.29
RPAIN-212ENST00000573126 ADORA1P30542 326 aa13.22□□□□□ -0.29
RPAIN-212ENST00000573126 GUCY1B3Q02153 619 aa13.22□□□□□ -0.29
RPAIN-212ENST00000573126 CCDC57Q2TAC2 916 aa13.22□□□□□ -0.29
RPAIN-212ENST00000573126 HSP90AB3PQ58FF7 597 aa13.22□□□□□ -0.29
RPAIN-212ENST00000573126 SASS6Q6UVJ0 657 aa13.22□□□□□ -0.29
RPAIN-212ENST00000573126 SMARCC2Q8TAQ2 1214 aa13.22□□□□□ -0.29
RPAIN-212ENST00000573126 OSBP2Q969R2 916 aa13.22□□□□□ -0.29
RPAIN-212ENST00000573126 FAM89AQ96GI7 184 aa13.22□□□□□ -0.29
RPAIN-212ENST00000573126 DDX19AQ9NUU7 478 aaKnown RBP13.22□□□□□ -0.29
RPAIN-212ENST00000573126 CEP126Q9P2H0 1117 aa13.22□□□□□ -0.29
RPAIN-212ENST00000573126 HAND2P61296 217 aa13.22□□□□□ -0.29
RPAIN-212ENST00000573126 GORABQ5T7V8 394 aa13.22□□□□□ -0.29
RPAIN-212ENST00000573126 CLSTN2Q9H4D0 955 aa13.22□□□□□ -0.29
RPAIN-212ENST00000573126 CBX8Q9HC52 389 aa13.22□□□□□ -0.29
RPAIN-212ENST00000573126 EXOSC10Q01780 885 aaKnown RBP13.21□□□□□ -0.29
RPAIN-212ENST00000573126 KCNF1Q9H3M0 494 aa13.21□□□□□ -0.29
RPAIN-212ENST00000573126 ZSCAN16Q9H4T2 348 aaPredicted RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms