RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 CCDC24Q8N4L8 307 aa14.63□□□□□ -0.07
CDRT1-206ENST00000571263 PUS3Q9BZE2 481 aaKnown RBP14.63□□□□□ -0.07
CDRT1-206ENST00000571263 TMX4Q9H1E5 349 aaPredicted RBP14.63□□□□□ -0.07
CDRT1-206ENST00000571263 FPGT-TNNI3KV9GXZ4 949 aa14.63□□□□□ -0.07
CDRT1-206ENST00000571263 SRGNP10124 158 aa14.62□□□□□ -0.07
CDRT1-206ENST00000571263 PDE4AP27815 886 aa14.62□□□□□ -0.07
CDRT1-206ENST00000571263 AACSQ86V21 672 aa14.62□□□□□ -0.07
CDRT1-206ENST00000571263 PDGFDQ9GZP0 370 aaPredicted RBP14.62□□□□□ -0.07
CDRT1-206ENST00000571263 CASZ1Q86V15 1759 aa14.62□□□□□ -0.07
CDRT1-206ENST00000571263 EIF5BO60841 1220 aaKnown RBP14.61□□□□□ -0.07
CDRT1-206ENST00000571263 PDE1AP54750 535 aa14.61□□□□□ -0.07
CDRT1-206ENST00000571263 TGFB2P61812 414 aa14.61□□□□□ -0.07
CDRT1-206ENST00000571263 PUM3Q15397 648 aaKnown RBP14.61□□□□□ -0.07
CDRT1-206ENST00000571263 LPIN2Q92539 896 aa14.61□□□□□ -0.07
CDRT1-206ENST00000571263 CELF1Q92879 486 aaKnown RBP14.61□□□□□ -0.07
CDRT1-206ENST00000571263 CNKSR1Q969H4 720 aa14.61□□□□□ -0.07
CDRT1-206ENST00000571263 EAF2Q96CJ1 260 aaPredicted RBP14.61□□□□□ -0.07
CDRT1-206ENST00000571263 ECHDC1Q9NTX5 307 aa14.61□□□□□ -0.07
CDRT1-206ENST00000571263 LRP5O75197 1615 aa14.6□□□□□ -0.07
CDRT1-206ENST00000571263 ZBTB7AO95365 584 aa14.6□□□□□ -0.07
CDRT1-206ENST00000571263 UBE4AQ14139 1066 aa14.6□□□□□ -0.07
CDRT1-206ENST00000571263 ATP2B3Q16720 1220 aa14.6□□□□□ -0.07
CDRT1-206ENST00000571263 GRIPAP1Q4V328 841 aa14.6□□□□□ -0.07
CDRT1-206ENST00000571263 C2CD5Q86YS7 1000 aa14.6□□□□□ -0.07
CDRT1-206ENST00000571263 SP8Q8IXZ3 490 aa14.6□□□□□ -0.07
CDRT1-206ENST00000571263 C16orf71Q8IYS4 520 aaPredicted RBP14.6□□□□□ -0.07
CDRT1-206ENST00000571263 VGLL2Q8N8G2 317 aa14.6□□□□□ -0.07
CDRT1-206ENST00000571263 NEUROD6Q96NK8 337 aa14.6□□□□□ -0.07
CDRT1-206ENST00000571263 MINPP1Q9UNW1 487 aa14.6□□□□□ -0.07
CDRT1-206ENST00000571263 SALL3Q9BXA9 1300 aa14.6□□□□□ -0.07
CDRT1-206ENST00000571263 TNRC6CQ9HCJ0 1690 aaKnown RBP14.59□□□□□ -0.07
CDRT1-206ENST00000571263 A0A1B0GUL7 405 aa14.59□□□□□ -0.07
CDRT1-206ENST00000571263 GLRX3O76003 335 aaKnown RBP14.59□□□□□ -0.07
CDRT1-206ENST00000571263 IFIT1P09914 478 aaKnown RBP14.59□□□□□ -0.07
CDRT1-206ENST00000571263 SLC5A1P13866 664 aa14.59□□□□□ -0.07
CDRT1-206ENST00000571263 CHRNDQ07001 517 aa14.59□□□□□ -0.07
CDRT1-206ENST00000571263 BMP2KLQ5H9B9 411 aa14.59□□□□□ -0.07
CDRT1-206ENST00000571263 CCDC158Q5M9N0 1113 aa14.59□□□□□ -0.07
CDRT1-206ENST00000571263 GORABQ5T7V8 394 aa14.59□□□□□ -0.07
CDRT1-206ENST00000571263 ATF5Q9Y2D1 282 aaPredicted RBP14.59□□□□□ -0.07
CDRT1-206ENST00000571263 LEMD3Q9Y2U8 911 aa14.59□□□□□ -0.07
CDRT1-206ENST00000571263 C10orf71Q711Q0 1435 aa14.58□□□□□ -0.07
CDRT1-206ENST00000571263 CC2D2BQ6DHV5 1058 aa14.58□□□□□ -0.08
CDRT1-206ENST00000571263 TICAM2Q86XR7 235 aa14.58□□□□□ -0.08
CDRT1-206ENST00000571263 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.58□□□□□ -0.08
CDRT1-206ENST00000571263 CCDC8Q9H0W5 538 aaPredicted RBP14.58□□□□□ -0.08
CDRT1-206ENST00000571263 SPON1Q9HCB6 807 aa14.58□□□□□ -0.08
CDRT1-206ENST00000571263 CD2APQ9Y5K6 639 aa14.58□□□□□ -0.08
CDRT1-206ENST00000571263 ATP5JP18859 108 aa14.57□□□□□ -0.08
CDRT1-206ENST00000571263 FGFR2P21802 821 aa14.57□□□□□ -0.08
CDRT1-206ENST00000571263 TIMM10P62072 90 aa14.57□□□□□ -0.08
CDRT1-206ENST00000571263 TTC22Q5TAA0 569 aa14.57□□□□□ -0.08
CDRT1-206ENST00000571263 ZNF622Q969S3 477 aaKnown RBP eCLIP14.57□□□□□ -0.08
CDRT1-206ENST00000571263 ZNF512BQ96KM6 892 aaPredicted RBP14.57□□□□□ -0.08
CDRT1-206ENST00000571263 ATP6V0A2Q9Y487 856 aa14.57□□□□□ -0.08
CDRT1-206ENST00000571263 ZNF609O15014 1411 aa14.57□□□□□ -0.08
CDRT1-206ENST00000571263 PSDA5PKW4 1024 aaPredicted RBP14.56□□□□□ -0.08
CDRT1-206ENST00000571263 PPEF1O14829 653 aaPredicted RBP14.56□□□□□ -0.08
CDRT1-206ENST00000571263 ZBTB22O15209 634 aa14.56□□□□□ -0.08
CDRT1-206ENST00000571263 UQCRFS1P1P0C7P4 283 aa14.56□□□□□ -0.08
CDRT1-206ENST00000571263 ATP2B4P23634 1241 aa14.56□□□□□ -0.08
CDRT1-206ENST00000571263 KCNJ4P48050 445 aa14.56□□□□□ -0.08
CDRT1-206ENST00000571263 XAGE2Q96GT9 111 aa14.56□□□□□ -0.08
CDRT1-206ENST00000571263 SGIP1Q9BQI5 828 aa14.56□□□□□ -0.08
CDRT1-206ENST00000571263 BCL11AQ9H165 835 aa14.56□□□□□ -0.08
CDRT1-206ENST00000571263 PODXL2Q9NZ53 605 aa14.56□□□□□ -0.08
CDRT1-206ENST00000571263 DBNLQ9UJU6 430 aaKnown RBP14.56□□□□□ -0.08
CDRT1-206ENST00000571263 XDHP47989 1333 aa14.56□□□□□ -0.08
CDRT1-206ENST00000571263 ANKRD31Q8N7Z5 1873 aa14.56□□□□□ -0.08
CDRT1-206ENST00000571263 CAVIN4Q5BKX8 364 aa14.55□□□□□ -0.08
CDRT1-206ENST00000571263 DBNDD2Q9BQY9 259 aa14.55□□□□□ -0.08
CDRT1-206ENST00000571263 GNL3LQ9NVN8 582 aaKnown RBP14.55□□□□□ -0.08
CDRT1-206ENST00000571263 ANKIB1Q9P2G1 1089 aa14.55□□□□□ -0.08
CDRT1-206ENST00000571263 TAF5LO75529 589 aa14.54□□□□□ -0.08
CDRT1-206ENST00000571263 TTC39AQ5SRH9 613 aa14.54□□□□□ -0.08
CDRT1-206ENST00000571263 SOGA3Q5TF21 947 aa14.54□□□□□ -0.08
CDRT1-206ENST00000571263 CNTROBQ8N137 903 aa14.54□□□□□ -0.08
CDRT1-206ENST00000571263 TTLL6Q8N841 843 aa14.54□□□□□ -0.08
CDRT1-206ENST00000571263 HELBQ8NG08 1087 aaPredicted RBP14.54□□□□□ -0.08
CDRT1-206ENST00000571263 PI4K2BQ8TCG2 481 aa14.54□□□□□ -0.08
CDRT1-206ENST00000571263 OTUD7AQ8TE49 926 aaPredicted RBP14.54□□□□□ -0.08
CDRT1-206ENST00000571263 ZNF804BA4D1E1 1349 aa14.54□□□□□ -0.08
CDRT1-206ENST00000571263 PTGER2P43116 358 aa14.53□□□□□ -0.08
CDRT1-206ENST00000571263 LRRFIP1Q32MZ4 808 aaKnown RBP14.53□□□□□ -0.08
CDRT1-206ENST00000571263 CASC1Q6TDU7 716 aa14.53□□□□□ -0.08
CDRT1-206ENST00000571263 C15orf52Q6ZUT6 534 aaKnown RBP14.53□□□□□ -0.08
CDRT1-206ENST00000571263 EVI5LQ96CN4 794 aa14.53□□□□□ -0.08
CDRT1-206ENST00000571263 PIM2Q9P1W9 311 aa14.53□□□□□ -0.08
CDRT1-206ENST00000571263 NSFL1CQ9UNZ2 370 aaKnown RBP14.53□□□□□ -0.08
CDRT1-206ENST00000571263 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.53□□□□□ -0.08
CDRT1-206ENST00000571263 KIF13BQ9NQT8 1826 aa14.52□□□□□ -0.08
CDRT1-206ENST00000571263 SEMA3EO15041 775 aa14.52□□□□□ -0.09
CDRT1-206ENST00000571263 IGSF3O75054 1194 aa14.52□□□□□ -0.09
CDRT1-206ENST00000571263 SKAP1Q86WV1 359 aa14.52□□□□□ -0.09
CDRT1-206ENST00000571263 SUPT20HQ8NEM7 779 aa14.52□□□□□ -0.09
CDRT1-206ENST00000571263 GGA1Q9UJY5 639 aa14.52□□□□□ -0.09
CDRT1-206ENST00000571263 TRIM6-TRIM34B2RNG4 842 aa14.51□□□□□ -0.09
CDRT1-206ENST00000571263 HIP1O00291 1037 aa14.51□□□□□ -0.09
CDRT1-206ENST00000571263 CHRNA5P30532 468 aa14.51□□□□□ -0.09
CDRT1-206ENST00000571263 CCDC102BQ68D86 513 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms