RNA–Protein interactions for RNA: ENST00000571064.5

UBFD1-210, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 794 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-210ENST00000571064 SLC4A2P04920 1241 aa27.47■■□□□ 1.99
UBFD1-210ENST00000571064 STK31Q9BXU1 1019 aa27.47■■□□□ 1.99
UBFD1-210ENST00000571064 CACNA1FO60840 1977 aa27.47■■□□□ 1.99
UBFD1-210ENST00000571064 AIMP1Q12904 312 aaKnown RBP27.46■■□□□ 1.99
UBFD1-210ENST00000571064 SSH1Q8WYL5 1049 aa27.46■■□□□ 1.99
UBFD1-210ENST00000571064 TNRC18O15417 2968 aaPredicted RBP27.46■■□□□ 1.99
UBFD1-210ENST00000571064 H7C1D1 291 aa27.45■■□□□ 1.98
UBFD1-210ENST00000571064 HCLS1P14317 486 aaPredicted RBP27.45■■□□□ 1.98
UBFD1-210ENST00000571064 MICALL2Q8IY33 904 aa27.45■■□□□ 1.98
UBFD1-210ENST00000571064 MRPL50Q8N5N7 158 aaKnown RBP27.44■■□□□ 1.98
UBFD1-210ENST00000571064 ZNF428Q96B54 188 aa27.44■■□□□ 1.98
UBFD1-210ENST00000571064 ZBTB12Q9Y330 459 aaPredicted RBP27.44■■□□□ 1.98
UBFD1-210ENST00000571064 SAMD7Q7Z3H4 446 aa27.43■■□□□ 1.98
UBFD1-210ENST00000571064 LAMB2P55268 1798 aa27.43■■□□□ 1.98
UBFD1-210ENST00000571064 FAM155AB1AL88 458 aaPredicted RBP27.42■■□□□ 1.98
UBFD1-210ENST00000571064 RARSP54136 660 aaKnown RBP27.42■■□□□ 1.98
UBFD1-210ENST00000571064 ALDH1L2Q3SY69 923 aa27.42■■□□□ 1.98
UBFD1-210ENST00000571064 SOX10P56693 466 aa27.41■■□□□ 1.98
UBFD1-210ENST00000571064 RGMBQ6NW40 437 aa27.41■■□□□ 1.98
UBFD1-210ENST00000571064 DDX46Q7L014 1031 aaKnown RBP27.41■■□□□ 1.98
UBFD1-210ENST00000571064 PDE4DIPQ5VU43 2346 aa27.4■■□□□ 1.98
UBFD1-210ENST00000571064 EGFRP00533 1210 aa27.39■■□□□ 1.98
UBFD1-210ENST00000571064 KIF23Q02241 960 aaPredicted RBP27.39■■□□□ 1.98
UBFD1-210ENST00000571064 GRAPQ13588 217 aa27.39■■□□□ 1.98
UBFD1-210ENST00000571064 TBC1D10BQ4KMP7 808 aaPredicted RBP27.39■■□□□ 1.98
UBFD1-210ENST00000571064 KRT26Q7Z3Y9 468 aa27.39■■□□□ 1.98
UBFD1-210ENST00000571064 GRAPLQ8TC17 118 aaPredicted RBP27.39■■□□□ 1.98
UBFD1-210ENST00000571064 DUOX1Q9NRD9 1551 aa27.39■■□□□ 1.97
UBFD1-210ENST00000571064 TAF1P21675 1872 aa27.38■■□□□ 1.97
UBFD1-210ENST00000571064 ANKRD36CQ5JPF3 1778 aa27.38■■□□□ 1.97
UBFD1-210ENST00000571064 PSMD14O00487 310 aa27.38■■□□□ 1.97
UBFD1-210ENST00000571064 FLIIQ13045 1269 aa27.38■■□□□ 1.97
UBFD1-210ENST00000571064 NLRP10Q86W26 655 aa27.38■■□□□ 1.97
UBFD1-210ENST00000571064 GBA2Q9HCG7 927 aaPredicted RBP27.38■■□□□ 1.97
UBFD1-210ENST00000571064 ANKRD13DQ6ZTN6 518 aa27.37■■□□□ 1.97
UBFD1-210ENST00000571064 PLBD2Q8NHP8 589 aa27.37■■□□□ 1.97
UBFD1-210ENST00000571064 DPF2Q92785 391 aa27.37■■□□□ 1.97
UBFD1-210ENST00000571064 SMC4Q9NTJ3 1288 aa27.37■■□□□ 1.97
UBFD1-210ENST00000571064 SAGE1Q9NXZ1 904 aa27.37■■□□□ 1.97
UBFD1-210ENST00000571064 ADM5C9JUS6 153 aa27.36■■□□□ 1.97
UBFD1-210ENST00000571064 TRPA1O75762 1119 aa27.36■■□□□ 1.97
UBFD1-210ENST00000571064 C2orf69Q8N8R5 385 aa27.36■■□□□ 1.97
UBFD1-210ENST00000571064 DBNDD1Q9H9R9 158 aa27.36■■□□□ 1.97
UBFD1-210ENST00000571064 RNF186Q9NXI6 227 aa27.36■■□□□ 1.97
UBFD1-210ENST00000571064 TRMT112Q9UI30 125 aaKnown RBP27.36■■□□□ 1.97
UBFD1-210ENST00000571064 BCAR3O75815 825 aa27.35■■□□□ 1.97
UBFD1-210ENST00000571064 ZNF157P51786 506 aaPredicted RBP27.35■■□□□ 1.97
UBFD1-210ENST00000571064 RBM26Q5T8P6 1007 aaKnown RBP27.35■■□□□ 1.97
UBFD1-210ENST00000571064 CCDC102AQ96A19 550 aa27.35■■□□□ 1.97
UBFD1-210ENST00000571064 POLR2AP24928 1970 aaKnown RBP27.35■■□□□ 1.97
UBFD1-210ENST00000571064 WASHC4Q2M389 1173 aa27.34■■□□□ 1.97
UBFD1-210ENST00000571064 RIMBP2O15034 1052 aa27.33■■□□□ 1.97
UBFD1-210ENST00000571064 HSP90AB3PQ58FF7 597 aa27.33■■□□□ 1.97
UBFD1-210ENST00000571064 DCPSQ96C86 337 aaKnown RBP27.33■■□□□ 1.97
UBFD1-210ENST00000571064 KCNQ5Q9NR82 932 aa27.33■■□□□ 1.97
UBFD1-210ENST00000571064 SH3TC1Q8TE82 1336 aa27.33■■□□□ 1.97
UBFD1-210ENST00000571064 PI4KAP2A4QPH2 592 aa27.32■■□□□ 1.96
UBFD1-210ENST00000571064 FKBP5Q13451 457 aaPredicted RBP27.32■■□□□ 1.96
UBFD1-210ENST00000571064 TCIRG1Q13488 830 aa27.32■■□□□ 1.96
UBFD1-210ENST00000571064 KSR2Q6VAB6 950 aa27.32■■□□□ 1.96
UBFD1-210ENST00000571064 RIC3Q7Z5B4 369 aa27.32■■□□□ 1.96
UBFD1-210ENST00000571064 PI4KAP1Q8N8J0 262 aa27.32■■□□□ 1.96
UBFD1-210ENST00000571064 NSFL1CQ9UNZ2 370 aaKnown RBP27.32■■□□□ 1.96
UBFD1-210ENST00000571064 TMC4Q7Z404 712 aa27.31■■□□□ 1.96
UBFD1-210ENST00000571064 MAP3K2Q9Y2U5 619 aa27.31■■□□□ 1.96
UBFD1-210ENST00000571064 LRRC37AA6NMS7 1700 aa27.3■■□□□ 1.96
UBFD1-210ENST00000571064 DDX58O95786 925 aaKnown RBP27.3■■□□□ 1.96
UBFD1-210ENST00000571064 CSRNP1Q96S65 589 aa27.3■■□□□ 1.96
UBFD1-210ENST00000571064 SLC10A3P09131 477 aa27.29■■□□□ 1.96
UBFD1-210ENST00000571064 DOK7Q18PE1 504 aa27.29■■□□□ 1.96
UBFD1-210ENST00000571064 CELF1Q92879 486 aaKnown RBP27.29■■□□□ 1.96
UBFD1-210ENST00000571064 POLLQ9UGP5 575 aa27.29■■□□□ 1.96
UBFD1-210ENST00000571064 NOB1Q9ULX3 412 aaKnown RBP27.29■■□□□ 1.96
UBFD1-210ENST00000571064 RTL9Q8NET4 1388 aa27.29■■□□□ 1.96
UBFD1-210ENST00000571064 F6X3S4 739 aa27.28■■□□□ 1.96
UBFD1-210ENST00000571064 C6orf229H3BNL8 230 aa27.28■■□□□ 1.96
UBFD1-210ENST00000571064 RPS12P25398 132 aaKnown RBP27.28■■□□□ 1.96
UBFD1-210ENST00000571064 ASTN2O75129 1339 aaPredicted RBP27.27■■□□□ 1.96
UBFD1-210ENST00000571064 ECE2O60344 883 aa27.27■■□□□ 1.96
UBFD1-210ENST00000571064 GPSM2P81274 684 aa27.27■■□□□ 1.96
UBFD1-210ENST00000571064 CTU1Q7Z7A3 348 aaKnown RBP27.27■■□□□ 1.96
UBFD1-210ENST00000571064 ISCA1Q9BUE6 129 aa27.27■■□□□ 1.96
UBFD1-210ENST00000571064 METTL22Q9BUU2 404 aaPredicted RBP27.27■■□□□ 1.96
UBFD1-210ENST00000571064 RCAN3Q9UKA8 241 aa27.27■■□□□ 1.96
UBFD1-210ENST00000571064 AKAP11Q9UKA4 1901 aa27.27■■□□□ 1.96
UBFD1-210ENST00000571064 PTPRCP08575 1304 aa27.26■■□□□ 1.95
UBFD1-210ENST00000571064 ATP5J2-PTCD1G3V325 749 aa27.26■■□□□ 1.95
UBFD1-210ENST00000571064 KIF4BQ2VIQ3 1234 aa27.26■■□□□ 1.95
UBFD1-210ENST00000571064 MYD88Q99836 296 aa27.26■■□□□ 1.95
UBFD1-210ENST00000571064 GGA3Q9NZ52 723 aa27.26■■□□□ 1.95
UBFD1-210ENST00000571064 SULF1Q8IWU6 871 aa27.25■■□□□ 1.95
UBFD1-210ENST00000571064 DNAAF4Q8WXU2 420 aa27.25■■□□□ 1.95
UBFD1-210ENST00000571064 COL4A1P02462 1669 aa27.24■■□□□ 1.95
UBFD1-210ENST00000571064 PRPF38BQ5VTL8 546 aaKnown RBP27.24■■□□□ 1.95
UBFD1-210ENST00000571064 CDCA5Q96FF9 252 aa27.24■■□□□ 1.95
UBFD1-210ENST00000571064 IGKV5-2P06315 115 aa27.23■■□□□ 1.95
UBFD1-210ENST00000571064 DDX60Q8IY21 1712 aaKnown RBP27.23■■□□□ 1.95
UBFD1-210ENST00000571064 SF3B3Q15393 1217 aaKnown RBP27.22■■□□□ 1.95
UBFD1-210ENST00000571064 FAM89AQ96GI7 184 aa27.22■■□□□ 1.95
UBFD1-210ENST00000571064 TNNQ9UQP3 1299 aa27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms