RNA–Protein interactions for RNA: ENST00000570001.5

PDXDC1-217, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2

Gene PDXDC1, Length 4,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-217ENST00000570001 UTYO14607 1347 aa13.75□□□□□ -0.21
PDXDC1-217ENST00000570001 CCT2P78371 535 aaKnown RBP13.75□□□□□ -0.21
PDXDC1-217ENST00000570001 UQCRFS1P1P0C7P4 283 aa13.75□□□□□ -0.21
PDXDC1-217ENST00000570001 SART3Q15020 963 aaKnown RBP13.75□□□□□ -0.21
PDXDC1-217ENST00000570001 ADCK5Q3MIX3 580 aa13.75□□□□□ -0.21
PDXDC1-217ENST00000570001 C8orf37Q96NL8 207 aa13.75□□□□□ -0.21
PDXDC1-217ENST00000570001 USP42Q9H9J4 1324 aaKnown RBP13.74□□□□□ -0.21
PDXDC1-217ENST00000570001 CUL4AQ13619 759 aa13.74□□□□□ -0.21
PDXDC1-217ENST00000570001 GIGYF2Q6Y7W6 1299 aaKnown RBP13.74□□□□□ -0.21
PDXDC1-217ENST00000570001 ZSWIM6Q9HCJ5 1215 aa13.74□□□□□ -0.21
PDXDC1-217ENST00000570001 LMBRD1Q9NUN5 540 aa13.74□□□□□ -0.21
PDXDC1-217ENST00000570001 PDE8AO60658 829 aa13.74□□□□□ -0.21
PDXDC1-217ENST00000570001 AKAP17AQ02040 695 aaKnown RBP13.74□□□□□ -0.21
PDXDC1-217ENST00000570001 VSIG10Q8N0Z9 540 aa13.74□□□□□ -0.21
PDXDC1-217ENST00000570001 HELBQ8NG08 1087 aaPredicted RBP13.74□□□□□ -0.21
PDXDC1-217ENST00000570001 ABCF2Q9UG63 623 aa13.74□□□□□ -0.21
PDXDC1-217ENST00000570001 ZNF396Q96N95 335 aaPredicted RBP13.74□□□□□ -0.21
PDXDC1-217ENST00000570001 PUS3Q9BZE2 481 aaKnown RBP13.74□□□□□ -0.21
PDXDC1-217ENST00000570001 SCAND2PQ9GZW5 306 aaPredicted RBP13.74□□□□□ -0.21
PDXDC1-217ENST00000570001 UBAP1LF5GYI3 381 aa13.74□□□□□ -0.21
PDXDC1-217ENST00000570001 TDO2P48775 406 aa13.74□□□□□ -0.21
PDXDC1-217ENST00000570001 HMGN5P82970 282 aaKnown RBP13.74□□□□□ -0.21
PDXDC1-217ENST00000570001 CCDC183Q5T5S1 534 aa13.74□□□□□ -0.21
PDXDC1-217ENST00000570001 SASS6Q6UVJ0 657 aa13.74□□□□□ -0.21
PDXDC1-217ENST00000570001 SEC62Q99442 399 aaKnown RBP13.74□□□□□ -0.21
PDXDC1-217ENST00000570001 CFAP45Q9UL16 551 aa13.74□□□□□ -0.21
PDXDC1-217ENST00000570001 ZBTB1Q9Y2K1 713 aa13.74□□□□□ -0.21
PDXDC1-217ENST00000570001 GOLGA6L6A8MZA4 724 aa13.73□□□□□ -0.21
PDXDC1-217ENST00000570001 UBE2HP62256 183 aa13.73□□□□□ -0.21
PDXDC1-217ENST00000570001 SLC9C2Q5TAH2 1124 aa13.73□□□□□ -0.21
PDXDC1-217ENST00000570001 CDC5LQ99459 802 aaKnown RBP13.73□□□□□ -0.21
PDXDC1-217ENST00000570001 SH3TC1Q8TE82 1336 aa13.73□□□□□ -0.21
PDXDC1-217ENST00000570001 KAZALD1Q96I82 304 aa13.73□□□□□ -0.21
PDXDC1-217ENST00000570001 CCDC87Q9NVE4 849 aa13.73□□□□□ -0.21
PDXDC1-217ENST00000570001 RAI14Q9P0K7 980 aa13.73□□□□□ -0.21
PDXDC1-217ENST00000570001 ZPR1O75312 459 aa13.73□□□□□ -0.21
PDXDC1-217ENST00000570001 STK11IPQ8N1F8 1099 aa13.73□□□□□ -0.21
PDXDC1-217ENST00000570001 GPR108Q9NPR9 543 aa13.73□□□□□ -0.21
PDXDC1-217ENST00000570001 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.73□□□□□ -0.21
PDXDC1-217ENST00000570001 KDM4AO75164 1064 aa13.73□□□□□ -0.21
PDXDC1-217ENST00000570001 HCLS1P14317 486 aaPredicted RBP13.73□□□□□ -0.21
PDXDC1-217ENST00000570001 ZNF589Q86UQ0 364 aaPredicted RBP13.73□□□□□ -0.21
PDXDC1-217ENST00000570001 ATG3Q9NT62 314 aa13.73□□□□□ -0.21
PDXDC1-217ENST00000570001 DTNBO60941 627 aa13.72□□□□□ -0.21
PDXDC1-217ENST00000570001 RABL6Q3YEC7 729 aaPredicted RBP13.72□□□□□ -0.21
PDXDC1-217ENST00000570001 DHX32Q7L7V1 743 aaKnown RBP13.72□□□□□ -0.21
PDXDC1-217ENST00000570001 NAPBQ9H115 298 aa13.72□□□□□ -0.21
PDXDC1-217ENST00000570001 CIAO1O76071 339 aa13.72□□□□□ -0.21
PDXDC1-217ENST00000570001 DNM1Q05193 864 aaKnown RBP13.72□□□□□ -0.21
PDXDC1-217ENST00000570001 TAF5LO75529 589 aa13.72□□□□□ -0.21
PDXDC1-217ENST00000570001 CTSWP56202 376 aa13.72□□□□□ -0.21
PDXDC1-217ENST00000570001 ME3Q16798 604 aa13.71□□□□□ -0.21
PDXDC1-217ENST00000570001 IL25Q9H293 177 aa13.71□□□□□ -0.21
PDXDC1-217ENST00000570001 TFIP11Q9UBB9 837 aaKnown RBP13.71□□□□□ -0.21
PDXDC1-217ENST00000570001 GOLGA6L19H0YKK7 550 aa13.71□□□□□ -0.21
PDXDC1-217ENST00000570001 NCOA7Q8NI08 942 aa13.71□□□□□ -0.21
PDXDC1-217ENST00000570001 CCDC192P0DO97 292 aa13.71□□□□□ -0.21
PDXDC1-217ENST00000570001 LRSAM1Q6UWE0 723 aa13.71□□□□□ -0.21
PDXDC1-217ENST00000570001 TNMDQ9H2S6 317 aa13.71□□□□□ -0.21
PDXDC1-217ENST00000570001 FBXO3Q9UK99 471 aa13.71□□□□□ -0.21
PDXDC1-217ENST00000570001 CAVIN4Q5BKX8 364 aa13.71□□□□□ -0.22
PDXDC1-217ENST00000570001 CHAMP1Q96JM3 812 aa13.71□□□□□ -0.22
PDXDC1-217ENST00000570001 NUP62CLQ9H1M0 184 aa13.71□□□□□ -0.22
PDXDC1-217ENST00000570001 GOLGA8BA8MQT2 603 aa13.7□□□□□ -0.22
PDXDC1-217ENST00000570001 BECN2A8MW95 431 aa13.7□□□□□ -0.22
PDXDC1-217ENST00000570001 PPFIA3O75145 1194 aa13.7□□□□□ -0.22
PDXDC1-217ENST00000570001 MCM5P33992 734 aa13.7□□□□□ -0.22
PDXDC1-217ENST00000570001 NECTIN1Q15223 517 aa13.7□□□□□ -0.22
PDXDC1-217ENST00000570001 NKX1-1Q15270 411 aaPredicted RBP13.7□□□□□ -0.22
PDXDC1-217ENST00000570001 NOL10Q9BSC4 688 aaKnown RBP13.7□□□□□ -0.22
PDXDC1-217ENST00000570001 PARP10Q53GL7 1025 aa13.7□□□□□ -0.22
PDXDC1-217ENST00000570001 CHST3Q7LGC8 479 aa13.7□□□□□ -0.22
PDXDC1-217ENST00000570001 ZAP70P43403 619 aa13.7□□□□□ -0.22
PDXDC1-217ENST00000570001 GUCY1B3Q02153 619 aa13.7□□□□□ -0.22
PDXDC1-217ENST00000570001 SAFBQ15424 915 aaKnown RBP eCLIP13.7□□□□□ -0.22
PDXDC1-217ENST00000570001 TMX4Q9H1E5 349 aaPredicted RBP13.7□□□□□ -0.22
PDXDC1-217ENST00000570001 CACNA1FO60840 1977 aa13.7□□□□□ -0.22
PDXDC1-217ENST00000570001 CCDC69A6NI79 296 aa13.7□□□□□ -0.22
PDXDC1-217ENST00000570001 IL6STP40189 918 aaPredicted RBP13.7□□□□□ -0.22
PDXDC1-217ENST00000570001 ME1P48163 572 aa13.7□□□□□ -0.22
PDXDC1-217ENST00000570001 FOXO4P98177 505 aa13.7□□□□□ -0.22
PDXDC1-217ENST00000570001 GREM2Q9H772 168 aa13.7□□□□□ -0.22
PDXDC1-217ENST00000570001 ESPNB1AK53 854 aa13.69□□□□□ -0.22
PDXDC1-217ENST00000570001 APOBRQ0VD83 1088 aa13.69□□□□□ -0.22
PDXDC1-217ENST00000570001 STK38Q15208 465 aa13.69□□□□□ -0.22
PDXDC1-217ENST00000570001 KINO60870 393 aaKnown RBP13.69□□□□□ -0.22
PDXDC1-217ENST00000570001 CDKL5O76039 1030 aa13.69□□□□□ -0.22
PDXDC1-217ENST00000570001 NLRP10Q86W26 655 aa13.69□□□□□ -0.22
PDXDC1-217ENST00000570001 CCDC39Q9UFE4 941 aa13.69□□□□□ -0.22
PDXDC1-217ENST00000570001 TPCN1Q9ULQ1 816 aa13.69□□□□□ -0.22
PDXDC1-217ENST00000570001 PUM3Q15397 648 aaKnown RBP13.69□□□□□ -0.22
PDXDC1-217ENST00000570001 FAM98CQ17RN3 349 aaKnown RBP13.69□□□□□ -0.22
PDXDC1-217ENST00000570001 APPBP2Q92624 585 aa13.69□□□□□ -0.22
PDXDC1-217ENST00000570001 DSCC1Q9BVC3 393 aa13.69□□□□□ -0.22
PDXDC1-217ENST00000570001 DDIT3P35638 169 aa13.69□□□□□ -0.22
PDXDC1-217ENST00000570001 AMOTL1Q8IY63 956 aa13.69□□□□□ -0.22
PDXDC1-217ENST00000570001 ANKRD18AQ8IVF6 992 aa13.68□□□□□ -0.22
PDXDC1-217ENST00000570001 SDF4Q9BRK5 362 aa13.68□□□□□ -0.22
PDXDC1-217ENST00000570001 ADORA1P30542 326 aa13.68□□□□□ -0.22
PDXDC1-217ENST00000570001 ISCA1Q9BUE6 129 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms